Gene annotation
Transcriptome id Sobic.003G354000.1
Synonym HAI2, Sb03g039630,
Functional annotation similar to Putative uncharacterized protein (PubMedID : 29862293)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
protein phosphatase 2C, putative, expressed
UniProt C5XPR0
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF337
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14497; protein phosphatase 2C
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G07430 : highly ABA-induced PP2C gene 2
RAP-DB (Rice) LOC_Os01g62760.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a026874 , Zm00025a039666
Brachypodium KQK10545 , KQK10544 , KQK10546 , KQK22386
Barley HORVU3Hr1G085930.2 , HORVU3Hr1G085930.3 , HORVU3Hr1G085930.1 , HORVU3Hr1G085930.6 , HORVU3Hr1G085930.4 , HORVU3Hr1G085930.5
Wheat TraesCS3B02G394600 , TraesCS3A02G362200 , TraesCS3B02G394600 , TraesCS3B02G394600 , TraesCS3D02G355900
Populus -


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cDNA sequences
Sobic.003G354000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G424400 similar to Putative uncharacterized protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
2 Sobic.003G281800 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
4 Sobic.010G147600 reticulon domain containing protein, putative, expressed -
5 Sobic.002G148300 - -
6 Sobic.006G207500 expressed protein -
7 Sobic.002G072600 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
8 Sobic.009G161900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NDP1, putative, expressed -
9 Sobic.010G054000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
10 Sobic.006G206800 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
11 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
12 Sobic.001G119700 transcription regulator, putative, expressed -
13 Sobic.007G152800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
14 Sobic.002G193600 endoglucanase, putative, expressed -
15 Sobic.004G333100 expressed protein -
16 Sobic.003G410700 exostosin family domain containing protein, expressed -
17 Sobic.006G148700 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
18 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
19 Sobic.008G111700 expressed protein -
20 Sobic.004G287400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized mscS family protein, putative, expressed -


Gene co-expression network
sample Sobic003G354000 Sobic003G354000 Sobic001G424400 Sobic001G424400 Sobic003G354000--Sobic001G424400 Sobic003G281800 Sobic003G281800 Sobic003G354000--Sobic003G281800 Sobic003G126800 Sobic003G126800 Sobic003G354000--Sobic003G126800 Sobic010G147600 Sobic010G147600 Sobic003G354000--Sobic010G147600 Sobic002G148300 Sobic002G148300 Sobic003G354000--Sobic002G148300 Sobic006G207500 Sobic006G207500 Sobic003G354000--Sobic006G207500 Sobic002G072600 Sobic002G072600 Sobic003G354000--Sobic002G072600 Sobic009G161900 Sobic009G161900 Sobic003G354000--Sobic009G161900 Sobic010G054000 Sobic010G054000 Sobic003G354000--Sobic010G054000 Sobic004G116300 Sobic004G116300 Sobic001G424400--Sobic004G116300 Sobic010G011900 Sobic010G011900 Sobic001G424400--Sobic010G011900 Sobic001G424400--Sobic009G161900 Sobic001G424400--Sobic010G147600 Sobic001G424400--Sobic003G281800 Sobic001G155300 Sobic001G155300 Sobic001G424400--Sobic001G155300 Sobic003G378000 Sobic003G378000 Sobic001G424400--Sobic003G378000 Sobic001G241600 Sobic001G241600 Sobic001G424400--Sobic001G241600 Sobic001G424400--Sobic003G354000 Sobic004G343800 Sobic004G343800 Sobic003G281800--Sobic004G343800 Sobic002G239900 Sobic002G239900 Sobic003G281800--Sobic002G239900 Sobic008G119400 Sobic008G119400 Sobic003G281800--Sobic008G119400 Sobic003G281800--Sobic001G424400 Sobic003G281800--Sobic001G241600 Sobic006G206800 Sobic006G206800 Sobic003G281800--Sobic006G206800 Sobic004G146300 Sobic004G146300 Sobic003G281800--Sobic004G146300 Sobic010G186500 Sobic010G186500 Sobic003G281800--Sobic010G186500 Sobic003G281800--Sobic009G161900 Sobic008G058700 Sobic008G058700 Sobic003G126800--Sobic008G058700 Sobic003G252900 Sobic003G252900 Sobic003G126800--Sobic003G252900 Sobic010G088300 Sobic010G088300 Sobic003G126800--Sobic010G088300 Sobic003G031200 Sobic003G031200 Sobic003G126800--Sobic003G031200 Sobic009G070200 Sobic009G070200 Sobic003G126800--Sobic009G070200 Sobic004G297300 Sobic004G297300 Sobic003G126800--Sobic004G297300 Sobic003G358300 Sobic003G358300 Sobic003G126800--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic003G126800--Sobic001G066700 Sobic003G039200 Sobic003G039200 Sobic003G126800--Sobic003G039200 Sobic010G147600--Sobic009G161900 Sobic010G147600--Sobic001G424400 Sobic002G043500 Sobic002G043500 Sobic010G147600--Sobic002G043500 Sobic001G477700 Sobic001G477700 Sobic010G147600--Sobic001G477700 Sobic009G108700 Sobic009G108700 Sobic010G147600--Sobic009G108700 Sobic010G147600--Sobic002G072600 Sobic003G408300 Sobic003G408300 Sobic010G147600--Sobic003G408300 Sobic001G179900 Sobic001G179900 Sobic010G147600--Sobic001G179900 Sobic001G118700 Sobic001G118700 Sobic010G147600--Sobic001G118700 Sobic001G503400 Sobic001G503400 Sobic002G148300--Sobic001G503400 Sobic002G272600 Sobic002G272600 Sobic002G148300--Sobic002G272600 Sobic002G143900 Sobic002G143900 Sobic002G148300--Sobic002G143900 Sobic001G119700 Sobic001G119700 Sobic002G148300--Sobic001G119700 Sobic007G162800 Sobic007G162800 Sobic002G148300--Sobic007G162800 Sobic010G219100 Sobic010G219100 Sobic002G148300--Sobic010G219100 Sobic009G193850 Sobic009G193850 Sobic002G148300--Sobic009G193850 Sobic005G010500 Sobic005G010500 Sobic002G148300--Sobic005G010500 Sobic002G180000 Sobic002G180000 Sobic002G148300--Sobic002G180000 Sobic010G267500 Sobic010G267500 Sobic006G207500--Sobic010G267500 Sobic010G065400 Sobic010G065400 Sobic006G207500--Sobic010G065400 Sobic009G031200 Sobic009G031200 Sobic006G207500--Sobic009G031200 Sobic006G183000 Sobic006G183000 Sobic006G207500--Sobic006G183000 Sobic006G222400 Sobic006G222400 Sobic006G207500--Sobic006G222400 Sobic007G097900 Sobic007G097900 Sobic006G207500--Sobic007G097900 Sobic003G052400 Sobic003G052400 Sobic006G207500--Sobic003G052400 Sobic001G061700 Sobic001G061700 Sobic006G207500--Sobic001G061700 Sobic008G137600 Sobic008G137600 Sobic006G207500--Sobic008G137600 Sobic003G162000 Sobic003G162000 Sobic002G072600--Sobic003G162000 Sobic010G156000 Sobic010G156000 Sobic002G072600--Sobic010G156000 Sobic002G134600 Sobic002G134600 Sobic002G072600--Sobic002G134600 Sobic004G311900 Sobic004G311900 Sobic002G072600--Sobic004G311900 Sobic006G073200 Sobic006G073200 Sobic002G072600--Sobic006G073200 Sobic004G246900 Sobic004G246900 Sobic002G072600--Sobic004G246900 Sobic008G161700 Sobic008G161700 Sobic002G072600--Sobic008G161700 Sobic001G362200 Sobic001G362200 Sobic002G072600--Sobic001G362200 Sobic006G032900 Sobic006G032900 Sobic002G072600--Sobic006G032900 Sobic009G161900--Sobic010G147600 Sobic004G058600 Sobic004G058600 Sobic009G161900--Sobic004G058600 Sobic001G471000 Sobic001G471000 Sobic009G161900--Sobic001G471000 Sobic001G333900 Sobic001G333900 Sobic009G161900--Sobic001G333900 Sobic001G193500 Sobic001G193500 Sobic009G161900--Sobic001G193500 Sobic004G066500 Sobic004G066500 Sobic009G161900--Sobic004G066500 Sobic009G161900--Sobic001G424400 Sobic009G161900--Sobic003G378000 Sobic010G170000 Sobic010G170000 Sobic009G161900--Sobic010G170000 Sobic006G183200 Sobic006G183200 Sobic010G054000--Sobic006G183200 Sobic004G203500 Sobic004G203500 Sobic010G054000--Sobic004G203500 Sobic007G069200 Sobic007G069200 Sobic010G054000--Sobic007G069200 Sobic002G388600 Sobic002G388600 Sobic010G054000--Sobic002G388600 Sobic007G203000 Sobic007G203000 Sobic010G054000--Sobic007G203000 Sobic004G295500 Sobic004G295500 Sobic010G054000--Sobic004G295500 Sobic002G225000 Sobic002G225000 Sobic010G054000--Sobic002G225000 Sobic003G421201 Sobic003G421201 Sobic010G054000--Sobic003G421201 Sobic010G059200 Sobic010G059200 Sobic010G054000--Sobic010G059200
Octagon: transcription factors


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