Gene annotation
Transcriptome id Sobic.003G357166.1
Synonym -
Functional annotation -
UniProt A0A1W0W0F3
Pfam -
Panther DB PTHR23012 PTHR23012:SF87
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05830 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os05g37900.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026841
Brachypodium PNT73202 , PNT73203 , PNT73201 , KQK10588 , KQK10587 , KQK10586
Barley HORVU1Hr1G073050.1
Wheat TraesCS1A02G280300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G143201 - -
2 Sobic.006G261500 amine oxidase, flavin-containing, domain containing protein, expressed K17839: PAO4, PAO3, polyamine oxidase
3 Sobic.K010000 RNA recognition motif containing protein, putative, expressed -
4 Sobic.003G334900 - -
5 Sobic.005G210300 - -
6 Sobic.005G173366 - -
7 Sobic.003G439400 OsDegp14 - Putative Deg protease homologue, expressed -
8 Sobic.005G085100 - -
9 Sobic.003G283250 - -
10 Sobic.001G028800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
11 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
12 Sobic.002G305500 - -
13 Sobic.004G200866 - -
14 Sobic.009G159700 expressed protein -
15 Sobic.005G142200 expressed protein -
16 Sobic.005G148500 OsFBX402 - F-box domain containing protein, expressed -
17 Sobic.009G101600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
18 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
19 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
20 Sobic.006G190800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor


Gene co-expression network
sample Sobic003G357166 Sobic003G357166 Sobic004G143201 Sobic004G143201 Sobic003G357166--Sobic004G143201 Sobic006G261500 Sobic006G261500 Sobic003G357166--Sobic006G261500 SobicK010000 SobicK010000 Sobic003G357166--SobicK010000 Sobic003G334900 Sobic003G334900 Sobic003G357166--Sobic003G334900 Sobic005G210300 Sobic005G210300 Sobic003G357166--Sobic005G210300 Sobic005G173366 Sobic005G173366 Sobic003G357166--Sobic005G173366 Sobic003G439400 Sobic003G439400 Sobic003G357166--Sobic003G439400 Sobic005G085100 Sobic005G085100 Sobic003G357166--Sobic005G085100 Sobic003G283250 Sobic003G283250 Sobic003G357166--Sobic003G283250 Sobic004G143201--Sobic003G439400 Sobic005G061601 Sobic005G061601 Sobic004G143201--Sobic005G061601 Sobic004G143201--Sobic005G210300 Sobic009G221000 Sobic009G221000 Sobic004G143201--Sobic009G221000 Sobic001G239300 Sobic001G239300 Sobic004G143201--Sobic001G239300 Sobic004G134700 Sobic004G134700 Sobic004G143201--Sobic004G134700 Sobic005G104400 Sobic005G104400 Sobic004G143201--Sobic005G104400 Sobic008G101000 Sobic008G101000 Sobic004G143201--Sobic008G101000 Sobic005G154850 Sobic005G154850 Sobic004G143201--Sobic005G154850 Sobic004G332000 Sobic004G332000 Sobic006G261500--Sobic004G332000 Sobic002G119800 Sobic002G119800 Sobic006G261500--Sobic002G119800 Sobic001G272200 Sobic001G272200 Sobic006G261500--Sobic001G272200 Sobic006G213601 Sobic006G213601 Sobic006G261500--Sobic006G213601 Sobic004G152601 Sobic004G152601 Sobic006G261500--Sobic004G152601 Sobic006G261500--Sobic003G283250 Sobic006G261500--Sobic003G357166 Sobic008G065400 Sobic008G065400 Sobic006G261500--Sobic008G065400 Sobic010G148750 Sobic010G148750 Sobic006G261500--Sobic010G148750 Sobic004G200866 Sobic004G200866 SobicK010000--Sobic004G200866 Sobic009G101600 Sobic009G101600 SobicK010000--Sobic009G101600 Sobic002G060500 Sobic002G060500 SobicK010000--Sobic002G060500 Sobic005G142200 Sobic005G142200 SobicK010000--Sobic005G142200 Sobic009G026400 Sobic009G026400 SobicK010000--Sobic009G026400 Sobic008G142000 Sobic008G142000 SobicK010000--Sobic008G142000 Sobic005G043400 Sobic005G043400 SobicK010000--Sobic005G043400 Sobic004G196500 Sobic004G196500 SobicK010000--Sobic004G196500 Sobic001G305400 Sobic001G305400 SobicK010000--Sobic001G305400 Sobic003G334900--Sobic001G239300 Sobic007G037301 Sobic007G037301 Sobic003G334900--Sobic007G037301 Sobic003G334900--Sobic003G357166 Sobic002G431200 Sobic002G431200 Sobic003G334900--Sobic002G431200 Sobic003G374500 Sobic003G374500 Sobic003G334900--Sobic003G374500 Sobic003G334900--Sobic005G061601 Sobic006G057733 Sobic006G057733 Sobic003G334900--Sobic006G057733 Sobic009G121750 Sobic009G121750 Sobic003G334900--Sobic009G121750 Sobic003G366850 Sobic003G366850 Sobic003G334900--Sobic003G366850 Sobic001G271000 Sobic001G271000 Sobic005G210300--Sobic001G271000 Sobic005G210300--Sobic009G101600 Sobic005G054300 Sobic005G054300 Sobic005G210300--Sobic005G054300 Sobic005G210300--Sobic009G026400 Sobic005G210300--Sobic005G142200 Sobic005G054600 Sobic005G054600 Sobic005G210300--Sobic005G054600 Sobic005G210300--Sobic002G060500 Sobic005G210300--Sobic005G085100 Sobic004G092300 Sobic004G092300 Sobic005G210300--Sobic004G092300 Sobic007G129401 Sobic007G129401 Sobic005G173366--Sobic007G129401 Sobic005G173366--Sobic009G026400 Sobic005G173366--Sobic002G060500 Sobic005G173366--Sobic005G043400 Sobic005G173366--Sobic004G196500 Sobic005G173366--Sobic009G101600 Sobic003G416100 Sobic003G416100 Sobic005G173366--Sobic003G416100 Sobic005G173366--SobicK010000 Sobic007G059300 Sobic007G059300 Sobic005G173366--Sobic007G059300 Sobic008G068500 Sobic008G068500 Sobic003G439400--Sobic008G068500 Sobic003G439400--Sobic004G092300 Sobic003G439400--Sobic004G143201 Sobic010G144000 Sobic010G144000 Sobic003G439400--Sobic010G144000 Sobic007G168800 Sobic007G168800 Sobic003G439400--Sobic007G168800 Sobic010G114600 Sobic010G114600 Sobic003G439400--Sobic010G114600 Sobic002G224450 Sobic002G224450 Sobic003G439400--Sobic002G224450 Sobic001G240400 Sobic001G240400 Sobic003G439400--Sobic001G240400 Sobic006G009400 Sobic006G009400 Sobic003G439400--Sobic006G009400 Sobic005G148500 Sobic005G148500 Sobic005G085100--Sobic005G148500 Sobic005G148400 Sobic005G148400 Sobic005G085100--Sobic005G148400 Sobic005G085100--Sobic005G043400 Sobic005G221550 Sobic005G221550 Sobic005G085100--Sobic005G221550 Sobic002G128400 Sobic002G128400 Sobic005G085100--Sobic002G128400 Sobic009G162401 Sobic009G162401 Sobic005G085100--Sobic009G162401 Sobic005G170800 Sobic005G170800 Sobic005G085100--Sobic005G170800 Sobic005G085100--Sobic001G271000 Sobic005G085100--Sobic009G101600 Sobic003G283250--Sobic002G431200 Sobic005G051300 Sobic005G051300 Sobic003G283250--Sobic005G051300 Sobic003G283250--Sobic009G121750 Sobic003G283250--Sobic006G261500 Sobic007G144400 Sobic007G144400 Sobic003G283250--Sobic007G144400 Sobic003G283250--Sobic008G065400 Sobic001G140200 Sobic001G140200 Sobic003G283250--Sobic001G140200
Octagon: transcription factors


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