Gene annotation
Transcriptome id Sobic.003G420600.2,Sobic.003G420600.10,Sobic.003G420600.4,Sobic.003G420600.6,Sobic.003G420600.1,Sobic.003G420600.8,Sobic.003G420600.7,Sobic.003G420600.5,Sobic.003G420600.9,Sobic.003G420600.3
Synonym Sb03g045380
Functional annotation expressed protein
UniProt A0A1W0W1B1 , A0A1W0W1F2 , A0A1B6Q837
Pfam PF00533
Panther DB PTHR23196 PTHR23196:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03130 : BRCT domain-containing DNA repair protein
RAP-DB (Rice) LOC_Os01g71256.1 : expressed protein
MaizeGDB (Corn) Zm00025a039162
Brachypodium KQK11457
Barley HORVU3Hr1G104070.9 , HORVU3Hr1G104070.8 , HORVU3Hr1G104070.3 , HORVU3Hr1G104070.2 , HORVU3Hr1G104070.1 , HORVU3Hr1G104070.7 , HORVU3Hr1G104070.6 , HORVU3Hr1G104070.5 , HORVU3Hr1G104070.4 , HORVU3Hr1G104070.12 , HORVU3Hr1G104070.11 , HORVU3Hr1G104070.10
Wheat TraesCS3B02G520300 , TraesCS3A02G476900 , TraesCS3A02G476900 , TraesCS3D02G471400 , TraesCS3D02G471400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G312400 dymeclin, putative, expressed -
2 Sobic.007G036800 xylosyltransferase, putative, expressed -
3 Sobic.003G424300 Pyrroline-5-carboxylate reductase(PubMedID : 24906815)@pyrroline-5-carboxylate reductase, putative, expressed K00286: pyrroline-5-carboxylate reductase
4 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
5 Sobic.006G222500 expressed protein -
6 Sobic.009G239600 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.003G103701 - K04728: ATM, serine-protein kinase ATM
8 Sobic.001G427900 ASC1, putative, expressed -
9 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
10 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
11 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
12 Sobic.008G018200 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
13 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
14 Sobic.001G205900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
15 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
16 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
17 Sobic.001G500500 expressed protein -
18 Sobic.004G340100 PB1 domain containing protein, expressed -
19 Sobic.006G215000 PAZ domain-containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
20 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1


Gene co-expression network
sample Sobic003G420600 Sobic003G420600 Sobic003G312400 Sobic003G312400 Sobic003G420600--Sobic003G312400 Sobic007G036800 Sobic007G036800 Sobic003G420600--Sobic007G036800 Sobic003G424300 Sobic003G424300 Sobic003G420600--Sobic003G424300 Sobic002G297600 Sobic002G297600 Sobic003G420600--Sobic002G297600 Sobic006G222500 Sobic006G222500 Sobic003G420600--Sobic006G222500 Sobic009G239600 Sobic009G239600 Sobic003G420600--Sobic009G239600 Sobic003G103701 Sobic003G103701 Sobic003G420600--Sobic003G103701 Sobic001G427900 Sobic001G427900 Sobic003G420600--Sobic001G427900 Sobic008G098700 Sobic008G098700 Sobic003G420600--Sobic008G098700 Sobic003G252900 Sobic003G252900 Sobic003G312400--Sobic003G252900 Sobic003G410400 Sobic003G410400 Sobic003G312400--Sobic003G410400 Sobic003G319000 Sobic003G319000 Sobic003G312400--Sobic003G319000 Sobic004G168300 Sobic004G168300 Sobic003G312400--Sobic004G168300 Sobic003G092700 Sobic003G092700 Sobic003G312400--Sobic003G092700 Sobic010G168900 Sobic010G168900 Sobic003G312400--Sobic010G168900 Sobic006G129000 Sobic006G129000 Sobic003G312400--Sobic006G129000 Sobic010G059700 Sobic010G059700 Sobic003G312400--Sobic010G059700 Sobic003G312400--Sobic002G297600 Sobic004G129500 Sobic004G129500 Sobic007G036800--Sobic004G129500 Sobic010G103500 Sobic010G103500 Sobic007G036800--Sobic010G103500 Sobic004G145600 Sobic004G145600 Sobic007G036800--Sobic004G145600 Sobic008G112100 Sobic008G112100 Sobic007G036800--Sobic008G112100 Sobic007G036800--Sobic010G059700 Sobic007G010200 Sobic007G010200 Sobic007G036800--Sobic007G010200 Sobic004G350200 Sobic004G350200 Sobic007G036800--Sobic004G350200 Sobic002G123600 Sobic002G123600 Sobic007G036800--Sobic002G123600 Sobic004G256300 Sobic004G256300 Sobic007G036800--Sobic004G256300 Sobic004G331900 Sobic004G331900 Sobic003G424300--Sobic004G331900 Sobic003G348200 Sobic003G348200 Sobic003G424300--Sobic003G348200 Sobic003G327600 Sobic003G327600 Sobic003G424300--Sobic003G327600 Sobic003G424300--Sobic003G312400 Sobic001G061900 Sobic001G061900 Sobic003G424300--Sobic001G061900 Sobic009G194200 Sobic009G194200 Sobic003G424300--Sobic009G194200 Sobic003G353400 Sobic003G353400 Sobic003G424300--Sobic003G353400 Sobic009G182200 Sobic009G182200 Sobic003G424300--Sobic009G182200 Sobic010G186500 Sobic010G186500 Sobic003G424300--Sobic010G186500 Sobic006G029400 Sobic006G029400 Sobic002G297600--Sobic006G029400 Sobic008G013300 Sobic008G013300 Sobic002G297600--Sobic008G013300 Sobic002G297600--Sobic010G059700 Sobic009G061000 Sobic009G061000 Sobic002G297600--Sobic009G061000 Sobic002G264300 Sobic002G264300 Sobic002G297600--Sobic002G264300 Sobic002G297600--Sobic003G312400 Sobic003G005900 Sobic003G005900 Sobic002G297600--Sobic003G005900 Sobic001G205900 Sobic001G205900 Sobic002G297600--Sobic001G205900 Sobic001G506000 Sobic001G506000 Sobic002G297600--Sobic001G506000 Sobic007G148400 Sobic007G148400 Sobic006G222500--Sobic007G148400 Sobic004G186300 Sobic004G186300 Sobic006G222500--Sobic004G186300 Sobic007G146600 Sobic007G146600 Sobic006G222500--Sobic007G146600 Sobic003G404100 Sobic003G404100 Sobic006G222500--Sobic003G404100 Sobic003G270100 Sobic003G270100 Sobic006G222500--Sobic003G270100 Sobic007G218600 Sobic007G218600 Sobic006G222500--Sobic007G218600 Sobic001G193100 Sobic001G193100 Sobic006G222500--Sobic001G193100 Sobic002G419000 Sobic002G419000 Sobic006G222500--Sobic002G419000 Sobic003G308300 Sobic003G308300 Sobic006G222500--Sobic003G308300 Sobic004G277400 Sobic004G277400 Sobic009G239600--Sobic004G277400 Sobic004G151200 Sobic004G151200 Sobic009G239600--Sobic004G151200 Sobic007G051400 Sobic007G051400 Sobic009G239600--Sobic007G051400 Sobic009G239600--Sobic004G350200 Sobic009G239600--Sobic003G005900 Sobic001G302900 Sobic001G302900 Sobic009G239600--Sobic001G302900 Sobic001G151600 Sobic001G151600 Sobic009G239600--Sobic001G151600 Sobic001G191900 Sobic001G191900 Sobic009G239600--Sobic001G191900 Sobic006G265600 Sobic006G265600 Sobic009G239600--Sobic006G265600 Sobic004G050300 Sobic004G050300 Sobic003G103701--Sobic004G050300 Sobic002G056000 Sobic002G056000 Sobic003G103701--Sobic002G056000 Sobic006G200901 Sobic006G200901 Sobic003G103701--Sobic006G200901 Sobic003G180100 Sobic003G180100 Sobic003G103701--Sobic003G180100 Sobic003G161800 Sobic003G161800 Sobic003G103701--Sobic003G161800 Sobic009G148000 Sobic009G148000 Sobic003G103701--Sobic009G148000 Sobic001G067000 Sobic001G067000 Sobic003G103701--Sobic001G067000 Sobic009G068700 Sobic009G068700 Sobic003G103701--Sobic009G068700 Sobic001G429200 Sobic001G429200 Sobic003G103701--Sobic001G429200 Sobic005G171900 Sobic005G171900 Sobic001G427900--Sobic005G171900 Sobic008G013200 Sobic008G013200 Sobic001G427900--Sobic008G013200 Sobic010G051800 Sobic010G051800 Sobic001G427900--Sobic010G051800 Sobic001G025700 Sobic001G025700 Sobic001G427900--Sobic001G025700 Sobic003G255700 Sobic003G255700 Sobic001G427900--Sobic003G255700 Sobic001G427900--Sobic003G308300 Sobic004G340566 Sobic004G340566 Sobic001G427900--Sobic004G340566 Sobic002G014032 Sobic002G014032 Sobic001G427900--Sobic002G014032 Sobic001G449000 Sobic001G449000 Sobic001G427900--Sobic001G449000 Sobic006G215800 Sobic006G215800 Sobic008G098700--Sobic006G215800 Sobic002G299200 Sobic002G299200 Sobic008G098700--Sobic002G299200 Sobic003G090000 Sobic003G090000 Sobic008G098700--Sobic003G090000 Sobic009G152120 Sobic009G152120 Sobic008G098700--Sobic009G152120 Sobic003G027000 Sobic003G027000 Sobic008G098700--Sobic003G027000 Sobic001G500500 Sobic001G500500 Sobic008G098700--Sobic001G500500 Sobic010G090700 Sobic010G090700 Sobic008G098700--Sobic010G090700 Sobic002G106200 Sobic002G106200 Sobic008G098700--Sobic002G106200 Sobic003G396500 Sobic003G396500 Sobic008G098700--Sobic003G396500
Octagon: transcription factors


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