Gene annotation
Transcriptome id Sobic.004G031400.1
Synonym RKF3, Sb04g002715
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A194YMG1
Pfam PF07714
Panther DB PTHR27006 PTHR27006:SF36
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G48010 : receptor-like kinase in in flowers 3
RAP-DB (Rice) LOC_Os01g28730.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018878
Brachypodium KQJ85564 , KQK04384
Barley HORVU4Hr1G019460.1
Wheat TraesCS4B02G109400
Populus PNT34810 , PNT06401


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
2 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
3 Sobic.006G274600 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
4 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
5 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
6 Sobic.009G045700 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
8 Sobic.007G054400 FAR1 family protein, expressed -
9 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
10 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
11 Sobic.008G136200 spotted leaf 11, putative, expressed -
12 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
13 Sobic.004G240800 protein kinase domain containing protein, expressed -
14 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.003G144400 homeobox protein knotted-1-like 6, putative, expressed -
16 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
17 Sobic.006G246900 expressed protein -
18 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
19 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.006G145000 disease resistance RPP13-like protein 1, putative, expressed -


Gene co-expression network
sample Sobic004G031400 Sobic004G031400 Sobic009G215800 Sobic009G215800 Sobic004G031400--Sobic009G215800 Sobic010G005600 Sobic010G005600 Sobic004G031400--Sobic010G005600 Sobic006G274600 Sobic006G274600 Sobic004G031400--Sobic006G274600 Sobic001G281600 Sobic001G281600 Sobic004G031400--Sobic001G281600 Sobic007G052900 Sobic007G052900 Sobic004G031400--Sobic007G052900 Sobic009G045700 Sobic009G045700 Sobic004G031400--Sobic009G045700 Sobic008G083000 Sobic008G083000 Sobic004G031400--Sobic008G083000 Sobic007G054400 Sobic007G054400 Sobic004G031400--Sobic007G054400 Sobic003G197800 Sobic003G197800 Sobic004G031400--Sobic003G197800 Sobic009G065100 Sobic009G065100 Sobic009G215800--Sobic009G065100 Sobic004G084300 Sobic004G084300 Sobic009G215800--Sobic004G084300 Sobic008G136200 Sobic008G136200 Sobic009G215800--Sobic008G136200 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic001G107500 Sobic001G107500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic008G067600 Sobic008G067600 Sobic009G215800--Sobic008G067600 Sobic010G005600--Sobic007G052900 Sobic010G176550 Sobic010G176550 Sobic010G005600--Sobic010G176550 Sobic002G031400 Sobic002G031400 Sobic010G005600--Sobic002G031400 Sobic001G159400 Sobic001G159400 Sobic010G005600--Sobic001G159400 Sobic004G174400 Sobic004G174400 Sobic010G005600--Sobic004G174400 Sobic010G005600--Sobic009G215800 Sobic002G351900 Sobic002G351900 Sobic010G005600--Sobic002G351900 Sobic001G384900 Sobic001G384900 Sobic010G005600--Sobic001G384900 Sobic010G056200 Sobic010G056200 Sobic010G005600--Sobic010G056200 Sobic006G274600--Sobic008G067600 Sobic006G274600--Sobic009G065100 Sobic004G164400 Sobic004G164400 Sobic006G274600--Sobic004G164400 Sobic010G255700 Sobic010G255700 Sobic006G274600--Sobic010G255700 Sobic004G039200 Sobic004G039200 Sobic006G274600--Sobic004G039200 Sobic006G274600--Sobic004G084300 Sobic007G161000 Sobic007G161000 Sobic006G274600--Sobic007G161000 Sobic006G105400 Sobic006G105400 Sobic006G274600--Sobic006G105400 Sobic002G320500 Sobic002G320500 Sobic006G274600--Sobic002G320500 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic007G052900--Sobic010G056200 Sobic004G113800 Sobic004G113800 Sobic007G052900--Sobic004G113800 Sobic002G209600 Sobic002G209600 Sobic007G052900--Sobic002G209600 Sobic007G052900--Sobic010G005600 Sobic004G083700 Sobic004G083700 Sobic007G052900--Sobic004G083700 Sobic007G054000 Sobic007G054000 Sobic007G052900--Sobic007G054000 Sobic010G280100 Sobic010G280100 Sobic007G052900--Sobic010G280100 Sobic006G180432 Sobic006G180432 Sobic007G052900--Sobic006G180432 Sobic007G052900--Sobic009G065100 Sobic002G051450 Sobic002G051450 Sobic009G045700--Sobic002G051450 Sobic006G009400 Sobic006G009400 Sobic009G045700--Sobic006G009400 Sobic006G262200 Sobic006G262200 Sobic009G045700--Sobic006G262200 Sobic009G004700 Sobic009G004700 Sobic009G045700--Sobic009G004700 Sobic010G263800 Sobic010G263800 Sobic009G045700--Sobic010G263800 Sobic010G144100 Sobic010G144100 Sobic009G045700--Sobic010G144100 Sobic008G034600 Sobic008G034600 Sobic009G045700--Sobic008G034600 Sobic002G144966 Sobic002G144966 Sobic009G045700--Sobic002G144966 Sobic008G153600 Sobic008G153600 Sobic009G045700--Sobic008G153600 Sobic005G084100 Sobic005G084100 Sobic008G083000--Sobic005G084100 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic008G083000--Sobic001G281600 Sobic008G083000--Sobic009G050900 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic001G253200 Sobic001G253200 Sobic007G054400--Sobic001G253200 Sobic007G054400--Sobic004G039200 Sobic003G101500 Sobic003G101500 Sobic007G054400--Sobic003G101500 Sobic004G145500 Sobic004G145500 Sobic007G054400--Sobic004G145500 Sobic007G054400--Sobic003G197800 Sobic004G258700 Sobic004G258700 Sobic007G054400--Sobic004G258700 Sobic001G433300 Sobic001G433300 Sobic007G054400--Sobic001G433300 Sobic007G054400--Sobic009G065100 Sobic006G052300 Sobic006G052300 Sobic007G054400--Sobic006G052300 Sobic002G157000 Sobic002G157000 Sobic003G197800--Sobic002G157000 Sobic003G197800--Sobic002G320500 Sobic002G186000 Sobic002G186000 Sobic003G197800--Sobic002G186000 Sobic002G151600 Sobic002G151600 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic003G197800--Sobic009G065100 Sobic003G173950 Sobic003G173950 Sobic003G197800--Sobic003G173950 Sobic002G248400 Sobic002G248400 Sobic003G197800--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic003G197800--Sobic001G206100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.