Gene annotation
Transcriptome id Sobic.004G115000.1
Synonym Sb04g009390, MUTE
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt C5XZG8
Pfam PF00010
Panther DB PTHR11514 PTHR11514:SF58
NCBI CDD KOG4029; Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24140 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g15760.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034418 , Zm00025a019928 , Zm00025a050887
Brachypodium PNT66286 , KQK18079
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G222300 DEF7 - Defensin and Defensin-like DEFL family, expressed -
2 Sobic.001G164500 MYB family transcription factor, putative, expressed -
3 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
4 Sobic.003G259500 - -
5 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
6 Sobic.005G047900 expressed protein -
7 Sobic.010G071300 pectinesterase, putative, expressed -
8 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
9 Sobic.001G379100 basic helix-loop-helix domain containing protein, expressed -
10 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
11 Sobic.001G165801 - -
12 Sobic.007G225700 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
13 Sobic.001G448000 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
14 Sobic.001G166100 B3 DNA binding domain containing protein, expressed -
15 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.006G237600 expressed protein -
17 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
18 Sobic.010G096200 expressed protein -
19 Sobic.005G196000 transporter family protein, putative, expressed -
20 Sobic.010G218800 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic004G115000 Sobic004G115000 Sobic004G222300 Sobic004G222300 Sobic004G115000--Sobic004G222300 Sobic001G164500 Sobic001G164500 Sobic004G115000--Sobic001G164500 Sobic003G333700 Sobic003G333700 Sobic004G115000--Sobic003G333700 Sobic003G259500 Sobic003G259500 Sobic004G115000--Sobic003G259500 Sobic005G102800 Sobic005G102800 Sobic004G115000--Sobic005G102800 Sobic005G047900 Sobic005G047900 Sobic004G115000--Sobic005G047900 Sobic010G071300 Sobic010G071300 Sobic004G115000--Sobic010G071300 Sobic003G250000 Sobic003G250000 Sobic004G115000--Sobic003G250000 Sobic001G379100 Sobic001G379100 Sobic004G115000--Sobic001G379100 Sobic004G222300--Sobic010G071300 Sobic004G222300--Sobic005G102800 Sobic004G222300--Sobic005G047900 Sobic004G269100 Sobic004G269100 Sobic004G222300--Sobic004G269100 Sobic001G448000 Sobic001G448000 Sobic004G222300--Sobic001G448000 Sobic004G222300--Sobic004G115000 Sobic004G222300--Sobic003G250000 Sobic003G148400 Sobic003G148400 Sobic004G222300--Sobic003G148400 Sobic004G215100 Sobic004G215100 Sobic004G222300--Sobic004G215100 Sobic001G164500--Sobic001G379100 Sobic006G233600 Sobic006G233600 Sobic001G164500--Sobic006G233600 Sobic010G096200 Sobic010G096200 Sobic001G164500--Sobic010G096200 Sobic002G280500 Sobic002G280500 Sobic001G164500--Sobic002G280500 Sobic001G164500--Sobic003G148400 Sobic004G109000 Sobic004G109000 Sobic001G164500--Sobic004G109000 Sobic001G478100 Sobic001G478100 Sobic001G164500--Sobic001G478100 Sobic001G164500--Sobic003G333700 Sobic006G238100 Sobic006G238100 Sobic001G164500--Sobic006G238100 Sobic002G078000 Sobic002G078000 Sobic003G333700--Sobic002G078000 Sobic003G223000 Sobic003G223000 Sobic003G333700--Sobic003G223000 Sobic001G013900 Sobic001G013900 Sobic003G333700--Sobic001G013900 Sobic001G104300 Sobic001G104300 Sobic003G333700--Sobic001G104300 Sobic003G333700--Sobic004G109000 Sobic003G333700--Sobic001G164500 Sobic001G165801 Sobic001G165801 Sobic003G333700--Sobic001G165801 Sobic001G188600 Sobic001G188600 Sobic003G333700--Sobic001G188600 Sobic003G333700--Sobic001G379100 Sobic004G253500 Sobic004G253500 Sobic003G259500--Sobic004G253500 Sobic003G259500--Sobic003G250000 Sobic003G078300 Sobic003G078300 Sobic003G259500--Sobic003G078300 Sobic003G259500--Sobic003G333700 Sobic009G002900 Sobic009G002900 Sobic003G259500--Sobic009G002900 Sobic007G079600 Sobic007G079600 Sobic003G259500--Sobic007G079600 Sobic003G259500--Sobic003G148400 Sobic001G461800 Sobic001G461800 Sobic003G259500--Sobic001G461800 Sobic003G259500--Sobic002G078000 Sobic003G102700 Sobic003G102700 Sobic005G102800--Sobic003G102700 Sobic007G192200 Sobic007G192200 Sobic005G102800--Sobic007G192200 Sobic005G102800--Sobic004G269100 Sobic006G226000 Sobic006G226000 Sobic005G102800--Sobic006G226000 Sobic009G119800 Sobic009G119800 Sobic005G102800--Sobic009G119800 Sobic003G140800 Sobic003G140800 Sobic005G102800--Sobic003G140800 Sobic001G381000 Sobic001G381000 Sobic005G102800--Sobic001G381000 Sobic004G244200 Sobic004G244200 Sobic005G102800--Sobic004G244200 Sobic009G031800 Sobic009G031800 Sobic005G102800--Sobic009G031800 Sobic005G047900--Sobic004G222300 Sobic005G047900--Sobic009G119800 Sobic004G134801 Sobic004G134801 Sobic005G047900--Sobic004G134801 Sobic005G147600 Sobic005G147600 Sobic005G047900--Sobic005G147600 Sobic002G366300 Sobic002G366300 Sobic005G047900--Sobic002G366300 Sobic005G047900--Sobic005G102800 Sobic006G083900 Sobic006G083900 Sobic005G047900--Sobic006G083900 Sobic005G047900--Sobic001G381000 Sobic001G122600 Sobic001G122600 Sobic005G047900--Sobic001G122600 Sobic010G071300--Sobic004G222300 Sobic006G069000 Sobic006G069000 Sobic010G071300--Sobic006G069000 Sobic010G071300--Sobic005G047900 Sobic010G071300--Sobic003G148400 Sobic010G071300--Sobic004G215100 Sobic010G071300--Sobic001G164500 Sobic010G071300--Sobic001G379100 Sobic010G071300--Sobic002G280500 Sobic003G055800 Sobic003G055800 Sobic010G071300--Sobic003G055800 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic003G250000--Sobic009G002900 Sobic003G291000 Sobic003G291000 Sobic003G250000--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic003G250000--Sobic002G286700 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic001G379100--Sobic001G164500 Sobic001G379100--Sobic010G096200 Sobic001G379100--Sobic003G148400 Sobic001G379100--Sobic002G280500 Sobic001G127700 Sobic001G127700 Sobic001G379100--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G379100--Sobic006G172700 Sobic002G225000 Sobic002G225000 Sobic001G379100--Sobic002G225000 Sobic004G060700 Sobic004G060700 Sobic001G379100--Sobic004G060700 Sobic001G379100--Sobic004G109000
Octagon: transcription factors


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