Gene annotation
Transcriptome id Sobic.004G133100.1
Synonym
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt A0A194YPE0
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF699
NCBI CDD KOG4178; Soluble epoxide hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53050 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g19650.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044415 , Zm00025a036474
Brachypodium KQK05119 , KQK05120
Barley HORVU1Hr1G079380.2 , HORVU1Hr1G079380.16 , HORVU1Hr1G079380.17 , HORVU1Hr1G079380.14 , HORVU1Hr1G079380.15 , HORVU1Hr1G079380.12 , HORVU1Hr1G079380.1 , HORVU1Hr1G079380.3 , HORVU1Hr1G079380.8
Wheat TraesCS1B02G381000 , TraesCS1B02G381000 , TraesCS1B02G381000 , TraesCS1D02G368900 , TraesCS1D02G368900 , TraesCS1A02G363800 , TraesCS1A02G363800 , TraesCS1A02G363800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G099100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
2 Sobic.004G299401 - -
3 Sobic.002G381200 expressed protein -
4 Sobic.005G053100 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
5 Sobic.001G228900 exostosin family domain containing protein, expressed -
6 Sobic.010G126800 lectin-like receptor kinase 7, putative, expressed -
7 Sobic.009G174300 "Capable of trans-activating SbMATE promoter alleles harboring one, four, and five copies of the MITE repeats "(PubMedID : 30545913)@WRKY84, expressed -
8 Sobic.002G229400 OsSCP43 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
9 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.002G178101 - -
11 Sobic.002G178000 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
12 Sobic.003G093200 - -
13 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
14 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
15 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
16 Sobic.006G121000 purine permease, putative, expressed -
17 Sobic.002G258900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
18 Sobic.005G066200 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
19 Sobic.007G186700 resistance protein, putative, expressed -
20 Sobic.002G168800 carotenoid cleavage dioxygenase, putative, expressed -


Gene co-expression network
sample Sobic004G133100 Sobic004G133100 Sobic002G099100 Sobic002G099100 Sobic004G133100--Sobic002G099100 Sobic004G299401 Sobic004G299401 Sobic004G133100--Sobic004G299401 Sobic002G381200 Sobic002G381200 Sobic004G133100--Sobic002G381200 Sobic005G053100 Sobic005G053100 Sobic004G133100--Sobic005G053100 Sobic001G228900 Sobic001G228900 Sobic004G133100--Sobic001G228900 Sobic010G126800 Sobic010G126800 Sobic004G133100--Sobic010G126800 Sobic009G174300 Sobic009G174300 Sobic004G133100--Sobic009G174300 Sobic002G229400 Sobic002G229400 Sobic004G133100--Sobic002G229400 Sobic005G220300 Sobic005G220300 Sobic004G133100--Sobic005G220300 Sobic002G099100--Sobic002G229400 Sobic002G099100--Sobic004G133100 Sobic002G099100--Sobic002G381200 Sobic008G168800 Sobic008G168800 Sobic002G099100--Sobic008G168800 Sobic007G186700 Sobic007G186700 Sobic002G099100--Sobic007G186700 Sobic001G341400 Sobic001G341400 Sobic002G099100--Sobic001G341400 Sobic002G099100--Sobic009G174300 Sobic004G346300 Sobic004G346300 Sobic002G099100--Sobic004G346300 Sobic004G002901 Sobic004G002901 Sobic002G099100--Sobic004G002901 Sobic004G299401--Sobic004G133100 Sobic002G417600 Sobic002G417600 Sobic004G299401--Sobic002G417600 Sobic004G299401--Sobic002G381200 Sobic002G253200 Sobic002G253200 Sobic004G299401--Sobic002G253200 Sobic004G153100 Sobic004G153100 Sobic004G299401--Sobic004G153100 Sobic004G299401--Sobic002G099100 Sobic004G157200 Sobic004G157200 Sobic004G299401--Sobic004G157200 Sobic001G342500 Sobic001G342500 Sobic004G299401--Sobic001G342500 Sobic001G059300 Sobic001G059300 Sobic004G299401--Sobic001G059300 Sobic008G078800 Sobic008G078800 Sobic002G381200--Sobic008G078800 Sobic004G187600 Sobic004G187600 Sobic002G381200--Sobic004G187600 Sobic009G136800 Sobic009G136800 Sobic002G381200--Sobic009G136800 Sobic003G317300 Sobic003G317300 Sobic002G381200--Sobic003G317300 Sobic008G099232 Sobic008G099232 Sobic002G381200--Sobic008G099232 Sobic005G069332 Sobic005G069332 Sobic002G381200--Sobic005G069332 Sobic007G064900 Sobic007G064900 Sobic002G381200--Sobic007G064900 Sobic007G148100 Sobic007G148100 Sobic002G381200--Sobic007G148100 Sobic004G080300 Sobic004G080300 Sobic002G381200--Sobic004G080300 Sobic002G235800 Sobic002G235800 Sobic005G053100--Sobic002G235800 Sobic005G065700 Sobic005G065700 Sobic005G053100--Sobic005G065700 Sobic005G071900 Sobic005G071900 Sobic005G053100--Sobic005G071900 Sobic005G066500 Sobic005G066500 Sobic005G053100--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G053100--Sobic005G110511 Sobic010G242800 Sobic010G242800 Sobic005G053100--Sobic010G242800 Sobic002G081850 Sobic002G081850 Sobic005G053100--Sobic002G081850 Sobic009G165100 Sobic009G165100 Sobic005G053100--Sobic009G165100 Sobic004G312500 Sobic004G312500 Sobic005G053100--Sobic004G312500 Sobic001G035300 Sobic001G035300 Sobic001G228900--Sobic001G035300 Sobic002G325500 Sobic002G325500 Sobic001G228900--Sobic002G325500 Sobic007G199101 Sobic007G199101 Sobic001G228900--Sobic007G199101 Sobic001G228900--Sobic002G417600 Sobic008G019900 Sobic008G019900 Sobic001G228900--Sobic008G019900 Sobic007G022300 Sobic007G022300 Sobic001G228900--Sobic007G022300 Sobic001G228900--Sobic002G099100 Sobic007G212250 Sobic007G212250 Sobic001G228900--Sobic007G212250 Sobic006G190150 Sobic006G190150 Sobic001G228900--Sobic006G190150 Sobic007G119750 Sobic007G119750 Sobic010G126800--Sobic007G119750 Sobic005G066200 Sobic005G066200 Sobic010G126800--Sobic005G066200 Sobic009G004950 Sobic009G004950 Sobic010G126800--Sobic009G004950 Sobic002G019000 Sobic002G019000 Sobic010G126800--Sobic002G019000 Sobic003G161400 Sobic003G161400 Sobic010G126800--Sobic003G161400 Sobic010G126800--Sobic010G242800 Sobic002G063700 Sobic002G063700 Sobic010G126800--Sobic002G063700 Sobic005G197350 Sobic005G197350 Sobic010G126800--Sobic005G197350 Sobic008G105800 Sobic008G105800 Sobic010G126800--Sobic008G105800 Sobic005G197400 Sobic005G197400 Sobic009G174300--Sobic005G197400 Sobic004G009200 Sobic004G009200 Sobic009G174300--Sobic004G009200 Sobic005G182800 Sobic005G182800 Sobic009G174300--Sobic005G182800 Sobic005G182900 Sobic005G182900 Sobic009G174300--Sobic005G182900 Sobic005G197500 Sobic005G197500 Sobic009G174300--Sobic005G197500 Sobic005G216600 Sobic005G216600 Sobic009G174300--Sobic005G216600 Sobic003G382200 Sobic003G382200 Sobic009G174300--Sobic003G382200 Sobic004G308500 Sobic004G308500 Sobic009G174300--Sobic004G308500 Sobic001G271300 Sobic001G271300 Sobic009G174300--Sobic001G271300 Sobic002G091700 Sobic002G091700 Sobic002G229400--Sobic002G091700 Sobic002G229400--Sobic008G168800 Sobic005G094400 Sobic005G094400 Sobic002G229400--Sobic005G094400 Sobic002G063566 Sobic002G063566 Sobic002G229400--Sobic002G063566 Sobic002G229400--Sobic001G341400 Sobic004G003100 Sobic004G003100 Sobic002G229400--Sobic004G003100 Sobic002G229400--Sobic007G186700 Sobic002G229400--Sobic002G099100 Sobic009G233100 Sobic009G233100 Sobic002G229400--Sobic009G233100 Sobic005G162400 Sobic005G162400 Sobic005G220300--Sobic005G162400 Sobic002G178101 Sobic002G178101 Sobic005G220300--Sobic002G178101 Sobic002G178000 Sobic002G178000 Sobic005G220300--Sobic002G178000 Sobic003G443700 Sobic003G443700 Sobic005G220300--Sobic003G443700 Sobic005G216400 Sobic005G216400 Sobic005G220300--Sobic005G216400 Sobic005G060200 Sobic005G060200 Sobic005G220300--Sobic005G060200 Sobic003G357700 Sobic003G357700 Sobic005G220300--Sobic003G357700 Sobic005G220300--Sobic004G346300 Sobic006G121000 Sobic006G121000 Sobic005G220300--Sobic006G121000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.