Gene annotation
Transcriptome id Sobic.004G226000.2
Synonym
Functional annotation RIPER1 - Ripening-related family protein precursor, expressed
UniProt C5XYP9
Pfam -
Panther DB PTHR33191 PTHR33191:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g42450.1 : RIPER1 - Ripening-related family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502500 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.004G302000 cysteine-rich repeat secretory protein 15 precursor, putative, expressed -
3 Sobic.009G009000 terpene synthase, putative, expressed -
4 Sobic.003G123700 dirigent, putative, expressed -
5 Sobic.002G119900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
6 Sobic.002G028500 app1, putative, expressed -
7 Sobic.006G084500 expressed protein -
8 Sobic.003G210100 stress responsive A/B Barrel domain containing protein, expressed -
9 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
10 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
11 Sobic.008G164900 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.007G090424 - K01061: carboxymethylenebutenolidase
13 Sobic.004G319800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperonin, putative, expressed K04078: groES, chaperonin GroES
14 Sobic.003G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinacetylesterase domain containing protein, expressed -
15 Sobic.008G021100 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
16 Sobic.009G114400 expressed protein K14839: nucleolar protein 16
17 Sobic.009G242400 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
18 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
19 Sobic.002G256100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
20 Sobic.010G075100 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -


Gene co-expression network
sample Sobic004G226000 Sobic004G226000 Sobic001G502500 Sobic001G502500 Sobic004G226000--Sobic001G502500 Sobic004G302000 Sobic004G302000 Sobic004G226000--Sobic004G302000 Sobic009G009000 Sobic009G009000 Sobic004G226000--Sobic009G009000 Sobic003G123700 Sobic003G123700 Sobic004G226000--Sobic003G123700 Sobic002G119900 Sobic002G119900 Sobic004G226000--Sobic002G119900 Sobic002G028500 Sobic002G028500 Sobic004G226000--Sobic002G028500 Sobic006G084500 Sobic006G084500 Sobic004G226000--Sobic006G084500 Sobic003G210100 Sobic003G210100 Sobic004G226000--Sobic003G210100 Sobic003G201200 Sobic003G201200 Sobic004G226000--Sobic003G201200 Sobic001G502500--Sobic006G084500 Sobic004G328601 Sobic004G328601 Sobic001G502500--Sobic004G328601 Sobic004G263000 Sobic004G263000 Sobic001G502500--Sobic004G263000 Sobic007G090424 Sobic007G090424 Sobic001G502500--Sobic007G090424 Sobic001G127700 Sobic001G127700 Sobic001G502500--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G502500--Sobic006G172700 Sobic001G003600 Sobic001G003600 Sobic001G502500--Sobic001G003600 Sobic010G124200 Sobic010G124200 Sobic001G502500--Sobic010G124200 Sobic001G502500--Sobic004G302000 Sobic004G302000--Sobic001G502500 Sobic009G198300 Sobic009G198300 Sobic004G302000--Sobic009G198300 Sobic004G302000--Sobic002G119900 Sobic001G170700 Sobic001G170700 Sobic004G302000--Sobic001G170700 Sobic004G302000--Sobic004G328601 Sobic004G302000--Sobic003G201200 Sobic004G050700 Sobic004G050700 Sobic004G302000--Sobic004G050700 Sobic001G338100 Sobic001G338100 Sobic004G302000--Sobic001G338100 Sobic003G319700 Sobic003G319700 Sobic004G302000--Sobic003G319700 Sobic004G024300 Sobic004G024300 Sobic009G009000--Sobic004G024300 Sobic006G189700 Sobic006G189700 Sobic009G009000--Sobic006G189700 Sobic002G388700 Sobic002G388700 Sobic009G009000--Sobic002G388700 Sobic002G256100 Sobic002G256100 Sobic009G009000--Sobic002G256100 Sobic009G196300 Sobic009G196300 Sobic009G009000--Sobic009G196300 Sobic009G009000--Sobic002G119900 Sobic004G262400 Sobic004G262400 Sobic009G009000--Sobic004G262400 Sobic001G533000 Sobic001G533000 Sobic009G009000--Sobic001G533000 Sobic009G009000--Sobic001G502500 Sobic001G394250 Sobic001G394250 Sobic003G123700--Sobic001G394250 Sobic004G105800 Sobic004G105800 Sobic003G123700--Sobic004G105800 Sobic003G123700--Sobic001G003600 Sobic005G110436 Sobic005G110436 Sobic003G123700--Sobic005G110436 Sobic003G096100 Sobic003G096100 Sobic003G123700--Sobic003G096100 Sobic002G020000 Sobic002G020000 Sobic003G123700--Sobic002G020000 Sobic003G123700--Sobic004G263000 Sobic001G519400 Sobic001G519400 Sobic003G123700--Sobic001G519400 Sobic009G115050 Sobic009G115050 Sobic003G123700--Sobic009G115050 Sobic007G002800 Sobic007G002800 Sobic002G119900--Sobic007G002800 Sobic001G059700 Sobic001G059700 Sobic002G119900--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic002G119900--Sobic010G085800 Sobic001G310300 Sobic001G310300 Sobic002G119900--Sobic001G310300 Sobic006G106100 Sobic006G106100 Sobic002G119900--Sobic006G106100 Sobic001G014000 Sobic001G014000 Sobic002G119900--Sobic001G014000 Sobic002G175100 Sobic002G175100 Sobic002G119900--Sobic002G175100 Sobic010G008400 Sobic010G008400 Sobic002G119900--Sobic010G008400 Sobic001G444800 Sobic001G444800 Sobic002G119900--Sobic001G444800 Sobic005G145100 Sobic005G145100 Sobic002G028500--Sobic005G145100 Sobic001G129600 Sobic001G129600 Sobic002G028500--Sobic001G129600 Sobic001G144800 Sobic001G144800 Sobic002G028500--Sobic001G144800 Sobic004G290300 Sobic004G290300 Sobic002G028500--Sobic004G290300 Sobic004G266700 Sobic004G266700 Sobic002G028500--Sobic004G266700 Sobic001G208600 Sobic001G208600 Sobic002G028500--Sobic001G208600 Sobic002G050100 Sobic002G050100 Sobic002G028500--Sobic002G050100 Sobic001G140800 Sobic001G140800 Sobic002G028500--Sobic001G140800 Sobic003G239100 Sobic003G239100 Sobic002G028500--Sobic003G239100 Sobic008G123600 Sobic008G123600 Sobic006G084500--Sobic008G123600 Sobic002G020100 Sobic002G020100 Sobic006G084500--Sobic002G020100 Sobic006G084500--Sobic001G003600 Sobic006G084500--Sobic006G172700 Sobic001G069500 Sobic001G069500 Sobic006G084500--Sobic001G069500 Sobic004G076000 Sobic004G076000 Sobic006G084500--Sobic004G076000 Sobic006G084500--Sobic007G090424 Sobic005G056201 Sobic005G056201 Sobic006G084500--Sobic005G056201 Sobic009G059100 Sobic009G059100 Sobic006G084500--Sobic009G059100 Sobic010G070500 Sobic010G070500 Sobic003G210100--Sobic010G070500 Sobic008G033400 Sobic008G033400 Sobic003G210100--Sobic008G033400 Sobic009G242300 Sobic009G242300 Sobic003G210100--Sobic009G242300 Sobic009G242400 Sobic009G242400 Sobic003G210100--Sobic009G242400 Sobic009G101700 Sobic009G101700 Sobic003G210100--Sobic009G101700 Sobic002G179300 Sobic002G179300 Sobic003G210100--Sobic002G179300 Sobic002G393400 Sobic002G393400 Sobic003G210100--Sobic002G393400 Sobic005G080900 Sobic005G080900 Sobic003G210100--Sobic005G080900 Sobic007G140300 Sobic007G140300 Sobic003G210100--Sobic007G140300 Sobic003G078900 Sobic003G078900 Sobic003G201200--Sobic003G078900 Sobic003G000200 Sobic003G000200 Sobic003G201200--Sobic003G000200 Sobic009G221800 Sobic009G221800 Sobic003G201200--Sobic009G221800 Sobic010G047600 Sobic010G047600 Sobic003G201200--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G201200--Sobic001G261460 Sobic003G321400 Sobic003G321400 Sobic003G201200--Sobic003G321400 Sobic003G201200--Sobic001G310300 Sobic009G130300 Sobic009G130300 Sobic003G201200--Sobic009G130300 Sobic003G430800 Sobic003G430800 Sobic003G201200--Sobic003G430800
Octagon: transcription factors


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