Gene annotation
Transcriptome id Sobic.004G302000.1
Synonym PDLP8
Functional annotation cysteine-rich repeat secretory protein 15 precursor, putative, expressed
UniProt C5XS42
Pfam PF01657
Panther DB PTHR32080 PTHR32080:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60720 : plasmodesmata-located protein 8
RAP-DB (Rice) LOC_Os02g43000.1 : cysteine-rich repeat secretory protein 15 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a032145
Brachypodium PNT69138 , KQJ83805
Barley HORVU6Hr1G060980.5 , HORVU6Hr1G060980.4 , HORVU6Hr1G060980.3 , HORVU6Hr1G060980.2 , HORVU6Hr1G060980.1
Wheat TraesCS6D02G220800 , TraesCS6D02G220800 , TraesCS6D02G220800 , TraesCS6B02G286000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G302000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502500 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.009G198300 expressed protein -
3 Sobic.002G119900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
4 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
5 Sobic.004G328601 - K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
6 Sobic.003G201200 hsp20/alpha crystallin family protein, putative, expressed -
7 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G338100 expressed protein -
9 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
10 Sobic.002G256100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
11 Sobic.004G226000 RIPER1 - Ripening-related family protein precursor, expressed -
12 Sobic.007G150800 expressed protein -
13 Sobic.001G014000 P21-Rho-binding domain containing protein, putative, expressed -
14 Sobic.006G084500 expressed protein -
15 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
16 Sobic.009G009000 terpene synthase, putative, expressed -
17 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
18 Sobic.001G533000 expressed protein -
19 Sobic.007G002800 phospholipase C, putative, expressed -
20 Sobic.009G141000 KH domain containing protein, putative, expressed K14945: protein quaking


Gene co-expression network
sample Sobic004G302000 Sobic004G302000 Sobic001G502500 Sobic001G502500 Sobic004G302000--Sobic001G502500 Sobic009G198300 Sobic009G198300 Sobic004G302000--Sobic009G198300 Sobic002G119900 Sobic002G119900 Sobic004G302000--Sobic002G119900 Sobic001G170700 Sobic001G170700 Sobic004G302000--Sobic001G170700 Sobic004G328601 Sobic004G328601 Sobic004G302000--Sobic004G328601 Sobic003G201200 Sobic003G201200 Sobic004G302000--Sobic003G201200 Sobic004G050700 Sobic004G050700 Sobic004G302000--Sobic004G050700 Sobic001G338100 Sobic001G338100 Sobic004G302000--Sobic001G338100 Sobic003G319700 Sobic003G319700 Sobic004G302000--Sobic003G319700 Sobic006G084500 Sobic006G084500 Sobic001G502500--Sobic006G084500 Sobic001G502500--Sobic004G328601 Sobic004G263000 Sobic004G263000 Sobic001G502500--Sobic004G263000 Sobic007G090424 Sobic007G090424 Sobic001G502500--Sobic007G090424 Sobic001G127700 Sobic001G127700 Sobic001G502500--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G502500--Sobic006G172700 Sobic001G003600 Sobic001G003600 Sobic001G502500--Sobic001G003600 Sobic010G124200 Sobic010G124200 Sobic001G502500--Sobic010G124200 Sobic001G502500--Sobic004G302000 Sobic003G015400 Sobic003G015400 Sobic009G198300--Sobic003G015400 Sobic003G000200 Sobic003G000200 Sobic009G198300--Sobic003G000200 Sobic003G250700 Sobic003G250700 Sobic009G198300--Sobic003G250700 Sobic007G090436 Sobic007G090436 Sobic009G198300--Sobic007G090436 Sobic008G021100 Sobic008G021100 Sobic009G198300--Sobic008G021100 Sobic001G107100 Sobic001G107100 Sobic009G198300--Sobic001G107100 Sobic004G293100 Sobic004G293100 Sobic009G198300--Sobic004G293100 Sobic002G028500 Sobic002G028500 Sobic009G198300--Sobic002G028500 Sobic003G321400 Sobic003G321400 Sobic009G198300--Sobic003G321400 Sobic007G002800 Sobic007G002800 Sobic002G119900--Sobic007G002800 Sobic001G059700 Sobic001G059700 Sobic002G119900--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic002G119900--Sobic010G085800 Sobic001G310300 Sobic001G310300 Sobic002G119900--Sobic001G310300 Sobic006G106100 Sobic006G106100 Sobic002G119900--Sobic006G106100 Sobic001G014000 Sobic001G014000 Sobic002G119900--Sobic001G014000 Sobic002G175100 Sobic002G175100 Sobic002G119900--Sobic002G175100 Sobic010G008400 Sobic010G008400 Sobic002G119900--Sobic010G008400 Sobic001G444800 Sobic001G444800 Sobic002G119900--Sobic001G444800 Sobic010G162400 Sobic010G162400 Sobic001G170700--Sobic010G162400 Sobic002G073800 Sobic002G073800 Sobic001G170700--Sobic002G073800 Sobic010G074600 Sobic010G074600 Sobic001G170700--Sobic010G074600 Sobic005G155200 Sobic005G155200 Sobic001G170700--Sobic005G155200 Sobic009G253300 Sobic009G253300 Sobic001G170700--Sobic009G253300 Sobic001G170700--Sobic001G502500 Sobic001G170700--Sobic004G328601 Sobic001G012500 Sobic001G012500 Sobic001G170700--Sobic001G012500 Sobic002G388700 Sobic002G388700 Sobic001G170700--Sobic002G388700 Sobic004G328900 Sobic004G328900 Sobic004G328601--Sobic004G328900 Sobic004G328601--Sobic001G502500 Sobic001G345900 Sobic001G345900 Sobic004G328601--Sobic001G345900 Sobic007G181000 Sobic007G181000 Sobic004G328601--Sobic007G181000 Sobic001G379300 Sobic001G379300 Sobic004G328601--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic004G328601--Sobic001G255300 Sobic003G317800 Sobic003G317800 Sobic004G328601--Sobic003G317800 Sobic006G238100 Sobic006G238100 Sobic004G328601--Sobic006G238100 Sobic002G128600 Sobic002G128600 Sobic004G328601--Sobic002G128600 Sobic003G078900 Sobic003G078900 Sobic003G201200--Sobic003G078900 Sobic003G201200--Sobic003G000200 Sobic009G221800 Sobic009G221800 Sobic003G201200--Sobic009G221800 Sobic010G047600 Sobic010G047600 Sobic003G201200--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G201200--Sobic001G261460 Sobic003G201200--Sobic003G321400 Sobic003G201200--Sobic001G310300 Sobic009G130300 Sobic009G130300 Sobic003G201200--Sobic009G130300 Sobic003G430800 Sobic003G430800 Sobic003G201200--Sobic003G430800 Sobic004G050700--Sobic010G047600 Sobic004G050700--Sobic009G221800 Sobic004G050700--Sobic003G321400 Sobic004G050700--Sobic001G310300 Sobic004G050700--Sobic003G000200 Sobic004G050700--Sobic001G261460 Sobic001G514200 Sobic001G514200 Sobic004G050700--Sobic001G514200 Sobic004G050700--Sobic003G078900 Sobic001G264300 Sobic001G264300 Sobic004G050700--Sobic001G264300 Sobic003G252800 Sobic003G252800 Sobic001G338100--Sobic003G252800 Sobic001G348700 Sobic001G348700 Sobic001G338100--Sobic001G348700 Sobic010G117900 Sobic010G117900 Sobic001G338100--Sobic010G117900 Sobic003G437200 Sobic003G437200 Sobic001G338100--Sobic003G437200 Sobic001G339700 Sobic001G339700 Sobic001G338100--Sobic001G339700 Sobic007G067350 Sobic007G067350 Sobic001G338100--Sobic007G067350 Sobic001G187200 Sobic001G187200 Sobic001G338100--Sobic001G187200 Sobic010G084300 Sobic010G084300 Sobic001G338100--Sobic010G084300 Sobic006G099900 Sobic006G099900 Sobic001G338100--Sobic006G099900 Sobic009G217700 Sobic009G217700 Sobic003G319700--Sobic009G217700 Sobic005G005600 Sobic005G005600 Sobic003G319700--Sobic005G005600 Sobic001G449600 Sobic001G449600 Sobic003G319700--Sobic001G449600 Sobic001G433900 Sobic001G433900 Sobic003G319700--Sobic001G433900 Sobic003G364000 Sobic003G364000 Sobic003G319700--Sobic003G364000 Sobic010G088700 Sobic010G088700 Sobic003G319700--Sobic010G088700 Sobic002G034800 Sobic002G034800 Sobic003G319700--Sobic002G034800 Sobic007G057000 Sobic007G057000 Sobic003G319700--Sobic007G057000 Sobic002G057900 Sobic002G057900 Sobic003G319700--Sobic002G057900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.