Gene annotation
Transcriptome id Sobic.004G229300.1
Synonym EXO, Sb04g027370
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
phosphate-induced protein 1 conserved region domain containing protein, expressed
UniProt C5XYB4
Pfam PF04674
Panther DB PTHR31279 PTHR31279:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08950 : Phosphate-responsive 1 family protein
RAP-DB (Rice) LOC_Os02g52010.1 : phosphate-induced protein 1 conserved region domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042564 , Zm00025a033147 , Zm00025a022159 , Zm00025a049504
Brachypodium KQK01825 , KQK18937
Barley HORVU6Hr1G077770.1 , HORVU6Hr1G077770.2 , HORVU7Hr1G036780.8 , HORVU7Hr1G036780.3 , HORVU7Hr1G036780.2 , HORVU7Hr1G036780.1 , HORVU7Hr1G036780.7 , HORVU7Hr1G036780.6 , HORVU7Hr1G036780.5 , HORVU7Hr1G036780.4
Wheat -
Populus -


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cDNA sequences
Sobic.004G229300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.007G090463 - K08235: xyloglucan:xyloglucosyl transferase
3 Sobic.009G194400 expressed protein -
4 Sobic.002G269100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.005G118100 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed K13436: pto-interacting protein 1
7 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
8 Sobic.002G377000 EF hand family protein, expressed -
9 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
10 Sobic.001G204900 cystathionin beta synthase protein, putative, expressed -
11 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
12 Sobic.004G273300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
13 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
16 Sobic.001G495132 - -
17 Sobic.006G187900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
18 Sobic.005G171001 - -
19 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
20 Sobic.003G323201 - -


Gene co-expression network
sample Sobic004G229300 Sobic004G229300 Sobic010G104300 Sobic010G104300 Sobic004G229300--Sobic010G104300 Sobic007G090463 Sobic007G090463 Sobic004G229300--Sobic007G090463 Sobic009G194400 Sobic009G194400 Sobic004G229300--Sobic009G194400 Sobic002G269100 Sobic002G269100 Sobic004G229300--Sobic002G269100 Sobic001G138200 Sobic001G138200 Sobic004G229300--Sobic001G138200 Sobic005G118100 Sobic005G118100 Sobic004G229300--Sobic005G118100 Sobic001G425500 Sobic001G425500 Sobic004G229300--Sobic001G425500 Sobic002G377000 Sobic002G377000 Sobic004G229300--Sobic002G377000 Sobic001G425600 Sobic001G425600 Sobic004G229300--Sobic001G425600 Sobic010G104300--Sobic009G194400 Sobic001G495132 Sobic001G495132 Sobic010G104300--Sobic001G495132 Sobic002G388800 Sobic002G388800 Sobic010G104300--Sobic002G388800 Sobic004G092800 Sobic004G092800 Sobic010G104300--Sobic004G092800 Sobic010G104300--Sobic002G269100 Sobic010G104300--Sobic001G425500 Sobic004G295600 Sobic004G295600 Sobic010G104300--Sobic004G295600 Sobic001G338600 Sobic001G338600 Sobic010G104300--Sobic001G338600 Sobic001G440200 Sobic001G440200 Sobic010G104300--Sobic001G440200 Sobic002G339100 Sobic002G339100 Sobic007G090463--Sobic002G339100 Sobic001G431500 Sobic001G431500 Sobic007G090463--Sobic001G431500 Sobic006G157500 Sobic006G157500 Sobic007G090463--Sobic006G157500 Sobic001G505100 Sobic001G505100 Sobic007G090463--Sobic001G505100 Sobic003G402300 Sobic003G402300 Sobic007G090463--Sobic003G402300 Sobic003G260300 Sobic003G260300 Sobic007G090463--Sobic003G260300 Sobic003G049700 Sobic003G049700 Sobic007G090463--Sobic003G049700 Sobic007G192300 Sobic007G192300 Sobic007G090463--Sobic007G192300 Sobic004G345500 Sobic004G345500 Sobic007G090463--Sobic004G345500 Sobic010G196600 Sobic010G196600 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic003G323201 Sobic003G323201 Sobic009G194400--Sobic003G323201 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic004G109700 Sobic004G109700 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic002G388900 Sobic002G388900 Sobic009G194400--Sobic002G388900 Sobic009G194400--Sobic004G092800 Sobic001G143100 Sobic001G143100 Sobic002G269100--Sobic001G143100 Sobic004G246600 Sobic004G246600 Sobic002G269100--Sobic004G246600 Sobic002G269100--Sobic004G295600 Sobic002G269100--Sobic004G097100 Sobic004G308900 Sobic004G308900 Sobic002G269100--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic002G269100--Sobic002G358300 Sobic002G269100--Sobic009G194400 Sobic004G229500 Sobic004G229500 Sobic002G269100--Sobic004G229500 Sobic006G187900 Sobic006G187900 Sobic002G269100--Sobic006G187900 Sobic001G138200--Sobic002G269100 Sobic001G100501 Sobic001G100501 Sobic001G138200--Sobic001G100501 Sobic001G138200--Sobic002G388800 Sobic002G225700 Sobic002G225700 Sobic001G138200--Sobic002G225700 Sobic001G138200--Sobic004G246600 Sobic001G295700 Sobic001G295700 Sobic001G138200--Sobic001G295700 Sobic001G138200--Sobic004G097100 Sobic003G207900 Sobic003G207900 Sobic001G138200--Sobic003G207900 Sobic001G138200--Sobic001G143100 Sobic004G169966 Sobic004G169966 Sobic005G118100--Sobic004G169966 Sobic003G389900 Sobic003G389900 Sobic005G118100--Sobic003G389900 Sobic009G011901 Sobic009G011901 Sobic005G118100--Sobic009G011901 Sobic004G311750 Sobic004G311750 Sobic005G118100--Sobic004G311750 Sobic005G132066 Sobic005G132066 Sobic005G118100--Sobic005G132066 Sobic004G165800 Sobic004G165800 Sobic005G118100--Sobic004G165800 Sobic005G118100--Sobic004G229300 Sobic002G100832 Sobic002G100832 Sobic005G118100--Sobic002G100832 Sobic002G102132 Sobic002G102132 Sobic005G118100--Sobic002G102132 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic004G109600 Sobic004G109600 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic001G082300 Sobic001G082300 Sobic002G377000--Sobic001G082300 Sobic004G088000 Sobic004G088000 Sobic002G377000--Sobic004G088000 Sobic003G406900 Sobic003G406900 Sobic002G377000--Sobic003G406900 Sobic004G164500 Sobic004G164500 Sobic002G377000--Sobic004G164500 Sobic006G241300 Sobic006G241300 Sobic002G377000--Sobic006G241300 Sobic002G377000--Sobic004G229300 Sobic002G205300 Sobic002G205300 Sobic002G377000--Sobic002G205300 Sobic001G311000 Sobic001G311000 Sobic002G377000--Sobic001G311000 Sobic001G253600 Sobic001G253600 Sobic002G377000--Sobic001G253600 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic001G425600--Sobic004G273300 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic001G425600--Sobic010G196600 Sobic001G279350 Sobic001G279350 Sobic001G425600--Sobic001G279350 Sobic001G425600--Sobic003G323201
Octagon: transcription factors


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