Gene annotation
Transcriptome id Sobic.007G090463.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8U6
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF45
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57550 : xyloglucan endotransglucosylase/hydrolase 25
RAP-DB (Rice) LOC_Os08g13920.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a054963 , Zm00025a054966 , Zm00025a000152 , Zm00025a054577 , Zm00025a054958
Brachypodium KQK13370 , KQK13368 , KQK13369 , KQK17341 , KQJ95698 , KQJ95697
Barley HORVU7Hr1G021950.2 , HORVU7Hr1G021950.1 , HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU3Hr1G016820.1 , HORVU3Hr1G016820.2 , HORVU3Hr1G016820.3 , HORVU3Hr1G016820.4 , HORVU3Hr1G016820.5 , HORVU3Hr1G016820.6 , HORVU3Hr1G016850.1 , HORVU3Hr1G016850.3 , HORVU3Hr1G016850.2 , HORVU3Hr1G016850.4 , HORVU3Hr1G016830.1 , HORVU7Hr1G098440.1 , HORVU7Hr1G098440.2 , HORVU7Hr1G098440.3 , HORVU7Hr1G098440.4 , HORVU7Hr1G098440.5 , HORVU7Hr1G098440.6 , HORVU7Hr1G021820.2 , HORVU7Hr1G021820.3 , HORVU7Hr1G021820.1 , HORVU7Hr1G012600.2 , HORVU7Hr1G012600.3 , HORVU7Hr1G012600.4 , HORVU7Hr1G012600.5 , HORVU6Hr1G093230.1 , HORVU6Hr1G093230.2 , HORVU7Hr1G098260.1 , HORVU7Hr1G098260.2 , HORVU7Hr1G098260.3 , HORVU3Hr1G016800.2 , HORVU3Hr1G016800.1
Wheat TraesCS7A02G103600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7B02G326900 , TraesCS3B02G108700 , TraesCS7D02G058200 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS3D02G093800 , TraesCS3A02G093400 , TraesCS7B02G327700 , TraesCS7D02G418600 , TraesCS6A02G408300 , TraesCS7A02G426900 , TraesCS3B02G108600 , TraesCS4A02G402200 , TraesCS4A02G402200 , TraesCS3A02G093700 , TraesCS3B02G108800 , TraesCS7A02G427600 , TraesCS1B02G424500 , TraesCS7A02G426100 , TraesCS7A02G103500 , TraesCS4A02G402300 , TraesCS7D02G419100 , TraesCS7D02G097400 , TraesCS7A02G427000 , TraesCS3D02G093700 , TraesCS3A02G093600 , TraesCS3D02G094000 , TraesCS7D02G097300 , TraesCS3D02G093900 , TraesCS6B02G454200 , TraesCS7A02G063300 , TraesCS7A02G426600 , TraesCS5B02G028800 , TraesCS7A02G426700 , TraesCS3A02G093500 , TraesCS7D02G419900 , TraesCS6D02G392100 , TraesCS5D02G038400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G339100 similar to Putative organic cation transporter(PubMedID : 24655390)@similar to Putative organic cation transporter(PubMedID : 24655390)@organic cation transporter-related, putative, expressed -
2 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
4 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
5 Sobic.003G402300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@P21-Rho-binding domain containing protein, putative, expressed -
6 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.003G049700 glyoxalase family protein, putative, expressed -
8 Sobic.007G192300 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.002G291900 RING-H2 finger protein, putative, expressed -
11 Sobic.007G122800 expressed protein -
12 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
13 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
14 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
15 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
16 Sobic.010G238800 glycosyltransferase family 43 protein, putative, expressed -
17 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
20 Sobic.002G328400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic007G090463 Sobic007G090463 Sobic002G339100 Sobic002G339100 Sobic007G090463--Sobic002G339100 Sobic001G431500 Sobic001G431500 Sobic007G090463--Sobic001G431500 Sobic006G157500 Sobic006G157500 Sobic007G090463--Sobic006G157500 Sobic001G505100 Sobic001G505100 Sobic007G090463--Sobic001G505100 Sobic003G402300 Sobic003G402300 Sobic007G090463--Sobic003G402300 Sobic003G260300 Sobic003G260300 Sobic007G090463--Sobic003G260300 Sobic003G049700 Sobic003G049700 Sobic007G090463--Sobic003G049700 Sobic007G192300 Sobic007G192300 Sobic007G090463--Sobic007G192300 Sobic004G345500 Sobic004G345500 Sobic007G090463--Sobic004G345500 Sobic002G339100--Sobic003G260300 Sobic002G339100--Sobic006G157500 Sobic003G265200 Sobic003G265200 Sobic002G339100--Sobic003G265200 Sobic001G502400 Sobic001G502400 Sobic002G339100--Sobic001G502400 Sobic009G184000 Sobic009G184000 Sobic002G339100--Sobic009G184000 Sobic003G432700 Sobic003G432700 Sobic002G339100--Sobic003G432700 Sobic001G318700 Sobic001G318700 Sobic002G339100--Sobic001G318700 Sobic006G075400 Sobic006G075400 Sobic002G339100--Sobic006G075400 Sobic006G007900 Sobic006G007900 Sobic002G339100--Sobic006G007900 Sobic001G431500--Sobic003G265200 Sobic002G328400 Sobic002G328400 Sobic001G431500--Sobic002G328400 Sobic004G315200 Sobic004G315200 Sobic001G431500--Sobic004G315200 Sobic001G431500--Sobic003G260300 Sobic004G191400 Sobic004G191400 Sobic001G431500--Sobic004G191400 Sobic003G093000 Sobic003G093000 Sobic001G431500--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic001G431500--Sobic002G189100 Sobic010G209200 Sobic010G209200 Sobic001G431500--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic001G431500--Sobic002G220000 Sobic009G168900 Sobic009G168900 Sobic006G157500--Sobic009G168900 Sobic006G157500--Sobic003G265200 Sobic006G157500--Sobic002G339100 Sobic006G157500--Sobic003G260300 Sobic001G477600 Sobic001G477600 Sobic006G157500--Sobic001G477600 Sobic006G157500--Sobic001G318700 Sobic006G157500--Sobic009G184000 Sobic004G109900 Sobic004G109900 Sobic006G157500--Sobic004G109900 Sobic001G112200 Sobic001G112200 Sobic006G157500--Sobic001G112200 Sobic001G505100--Sobic004G345500 Sobic004G152400 Sobic004G152400 Sobic001G505100--Sobic004G152400 Sobic004G103800 Sobic004G103800 Sobic001G505100--Sobic004G103800 Sobic007G019000 Sobic007G019000 Sobic001G505100--Sobic007G019000 Sobic010G230700 Sobic010G230700 Sobic001G505100--Sobic010G230700 Sobic007G018300 Sobic007G018300 Sobic001G505100--Sobic007G018300 Sobic002G330000 Sobic002G330000 Sobic001G505100--Sobic002G330000 Sobic003G344600 Sobic003G344600 Sobic001G505100--Sobic003G344600 Sobic002G115000 Sobic002G115000 Sobic001G505100--Sobic002G115000 Sobic003G402300--Sobic006G157500 Sobic007G177100 Sobic007G177100 Sobic003G402300--Sobic007G177100 Sobic004G164500 Sobic004G164500 Sobic003G402300--Sobic004G164500 Sobic002G353800 Sobic002G353800 Sobic003G402300--Sobic002G353800 Sobic003G402300--Sobic002G339100 Sobic001G311000 Sobic001G311000 Sobic003G402300--Sobic001G311000 Sobic009G159200 Sobic009G159200 Sobic003G402300--Sobic009G159200 Sobic003G402300--Sobic007G090463 Sobic001G372100 Sobic001G372100 Sobic003G402300--Sobic001G372100 Sobic003G228900 Sobic003G228900 Sobic003G260300--Sobic003G228900 Sobic001G079300 Sobic001G079300 Sobic003G260300--Sobic001G079300 Sobic003G260300--Sobic004G191400 Sobic003G260300--Sobic006G075400 Sobic003G260300--Sobic003G432700 Sobic003G260300--Sobic001G502400 Sobic003G260300--Sobic009G184000 Sobic004G191300 Sobic004G191300 Sobic003G260300--Sobic004G191300 Sobic001G195200 Sobic001G195200 Sobic003G260300--Sobic001G195200 Sobic003G049700--Sobic004G191400 Sobic007G122800 Sobic007G122800 Sobic003G049700--Sobic007G122800 Sobic004G064500 Sobic004G064500 Sobic003G049700--Sobic004G064500 Sobic009G192600 Sobic009G192600 Sobic003G049700--Sobic009G192600 Sobic003G049700--Sobic002G189100 Sobic003G049700--Sobic003G228900 Sobic001G267600 Sobic001G267600 Sobic003G049700--Sobic001G267600 Sobic003G049700--Sobic006G007900 Sobic002G358300 Sobic002G358300 Sobic003G049700--Sobic002G358300 Sobic003G160700 Sobic003G160700 Sobic007G192300--Sobic003G160700 Sobic001G322200 Sobic001G322200 Sobic007G192300--Sobic001G322200 Sobic009G248500 Sobic009G248500 Sobic007G192300--Sobic009G248500 Sobic003G037800 Sobic003G037800 Sobic007G192300--Sobic003G037800 Sobic002G393400 Sobic002G393400 Sobic007G192300--Sobic002G393400 Sobic003G078200 Sobic003G078200 Sobic007G192300--Sobic003G078200 Sobic007G192300--Sobic003G228900 Sobic007G192300--Sobic004G345500 Sobic009G027900 Sobic009G027900 Sobic007G192300--Sobic009G027900 Sobic004G345500--Sobic003G160700 Sobic001G502900 Sobic001G502900 Sobic004G345500--Sobic001G502900 Sobic005G113300 Sobic005G113300 Sobic004G345500--Sobic005G113300 Sobic001G475500 Sobic001G475500 Sobic004G345500--Sobic001G475500 Sobic001G031700 Sobic001G031700 Sobic004G345500--Sobic001G031700 Sobic003G125650 Sobic003G125650 Sobic004G345500--Sobic003G125650 Sobic001G295200 Sobic001G295200 Sobic004G345500--Sobic001G295200 Sobic010G221300 Sobic010G221300 Sobic004G345500--Sobic010G221300 Sobic007G197800 Sobic007G197800 Sobic004G345500--Sobic007G197800
Octagon: transcription factors


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