Gene annotation
Transcriptome id Sobic.004G244600.1
Synonym Sb04g028520, GH9B8, AtGH9B8
Functional annotation endoglucanase, putative, expressed
UniProt C5XZ77
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G32990 : glycosyl hydrolase 9B8
RAP-DB (Rice) LOC_Os02g50490.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a019006 , Zm00025a037591 , Zm00025a021973 , Zm00025a013859 , Zm00025a032681 , Zm00025a049387 , Zm00025a046876
Brachypodium KQK03329 , KQJ93361 , KQK07034 , KQJ98284 , KQK02009 , PNT76125 , KQJ90132
Barley HORVU6Hr1G077010.1 , HORVU6Hr1G077010.3 , HORVU6Hr1G077010.2 , HORVU6Hr1G077010.5 , HORVU6Hr1G077010.4 , HORVU6Hr1G077010.7 , HORVU6Hr1G077010.6 , HORVU6Hr1G077010.9 , HORVU6Hr1G077010.8 , HORVU6Hr1G077010.20 , HORVU6Hr1G077010.21 , HORVU6Hr1G077010.22 , HORVU5Hr1G060140.5 , HORVU5Hr1G060140.7 , HORVU5Hr1G060140.1 , HORVU6Hr1G022270.10 , HORVU5Hr1G060140.8 , HORVU5Hr1G060140.9 , HORVU5Hr1G098710.1 , HORVU7Hr1G040680.6 , HORVU7Hr1G040680.5 , HORVU7Hr1G040680.4 , HORVU7Hr1G040680.3 , HORVU7Hr1G040680.2 , HORVU6Hr1G077010.15 , HORVU6Hr1G077010.14 , HORVU6Hr1G077010.17 , HORVU6Hr1G077010.16 , HORVU6Hr1G077010.11 , HORVU6Hr1G077010.10 , HORVU6Hr1G077010.13 , HORVU6Hr1G077010.12 , HORVU6Hr1G077010.19 , HORVU6Hr1G077010.18 , HORVU5Hr1G060140.12 , HORVU5Hr1G060140.13 , HORVU5Hr1G060140.10 , HORVU5Hr1G060140.11 , HORVU6Hr1G022270.9 , HORVU6Hr1G022270.8 , HORVU6Hr1G022270.7 , HORVU6Hr1G022270.6 , HORVU6Hr1G022270.5 , HORVU6Hr1G022270.4 , HORVU6Hr1G022270.3 , HORVU6Hr1G022270.2 , HORVU6Hr1G022270.1 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.8 , HORVU5Hr1G052830.1 , HORVU5Hr1G052830.2 , HORVU7Hr1G040720.1 , HORVU7Hr1G040720.2
Wheat TraesCS5A02G172200 , TraesCS5A02G172200 , TraesCS6B02G342600 , TraesCS6A02G122100 , TraesCS7A02G144500 , TraesCS7D02G146000 , TraesCS6D02G291800 , TraesCS5B02G201100 , TraesCSU02G093600 , TraesCS5B02G169500 , TraesCS5B02G169600 , TraesCS6B02G150300 , TraesCS7B02G047000 , TraesCS7A02G144700 , TraesCS5D02G176800 , TraesCS7B02G104600 , TraesCS5D02G208900 , TraesCS6D02G112100 , TraesCS7A02G197900 , TraesCS5A02G202600 , TraesCS7B02G046900 , TraesCS7A02G144400 , TraesCS7D02G201000 , TraesCS6A02G312400 , TraesCS6A02G312400 , TraesCS5A02G172100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G410800 exostosin family domain containing protein, expressed -
2 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
3 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
4 Sobic.001G434300 expressed protein -
5 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
6 Sobic.004G042700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
7 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
8 Sobic.010G052200 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S-adenosyl methionine (SAM)-dependent O-methyltransferase(PubMedID : 30289910)@enzyme involved in monolignol synthesis(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase(PubMedID : 27457122)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
9 Sobic.009G054301 - -
10 Sobic.009G220100 exostosin family domain containing protein, expressed -
11 Sobic.010G252401 - K14488: SAUR family protein
12 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
13 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
14 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
16 Sobic.003G241300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@isoflavone reductase, putative, expressed -
17 Sobic.010G083400 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.006G148800 "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@phenylalanine ammonia-lyase, putative, expressed K13064: phenylalanine/tyrosine ammonia-lyase
19 Sobic.010G101900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
20 Sobic.001G307700 expressed protein -


Gene co-expression network
sample Sobic004G244600 Sobic004G244600 Sobic003G410800 Sobic003G410800 Sobic004G244600--Sobic003G410800 Sobic009G034300 Sobic009G034300 Sobic004G244600--Sobic009G034300 Sobic004G221300 Sobic004G221300 Sobic004G244600--Sobic004G221300 Sobic001G434300 Sobic001G434300 Sobic004G244600--Sobic001G434300 Sobic001G409100 Sobic001G409100 Sobic004G244600--Sobic001G409100 Sobic004G042700 Sobic004G042700 Sobic004G244600--Sobic004G042700 Sobic001G360800 Sobic001G360800 Sobic004G244600--Sobic001G360800 Sobic010G052200 Sobic010G052200 Sobic004G244600--Sobic010G052200 Sobic009G054301 Sobic009G054301 Sobic004G244600--Sobic009G054301 Sobic009G220100 Sobic009G220100 Sobic003G410800--Sobic009G220100 Sobic003G410800--Sobic001G409100 Sobic001G418100 Sobic001G418100 Sobic003G410800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic003G410800--Sobic002G396400 Sobic002G154600 Sobic002G154600 Sobic003G410800--Sobic002G154600 Sobic003G410800--Sobic004G221300 Sobic003G410800--Sobic009G034300 Sobic002G128800 Sobic002G128800 Sobic003G410800--Sobic002G128800 Sobic003G410800--Sobic010G052200 Sobic009G034300--Sobic001G360800 Sobic009G034300--Sobic004G221300 Sobic001G224300 Sobic001G224300 Sobic009G034300--Sobic001G224300 Sobic009G034300--Sobic003G410800 Sobic002G203900 Sobic002G203900 Sobic009G034300--Sobic002G203900 Sobic006G036400 Sobic006G036400 Sobic009G034300--Sobic006G036400 Sobic002G167600 Sobic002G167600 Sobic009G034300--Sobic002G167600 Sobic009G034300--Sobic001G409100 Sobic010G180100 Sobic010G180100 Sobic009G034300--Sobic010G180100 Sobic004G221300--Sobic001G360800 Sobic004G221300--Sobic009G034300 Sobic004G221300--Sobic001G409100 Sobic004G221300--Sobic003G410800 Sobic003G296400 Sobic003G296400 Sobic004G221300--Sobic003G296400 Sobic008G110200 Sobic008G110200 Sobic004G221300--Sobic008G110200 Sobic004G221300--Sobic001G224300 Sobic004G221300--Sobic009G220100 Sobic004G221300--Sobic006G036400 Sobic001G434300--Sobic002G154600 Sobic007G218800 Sobic007G218800 Sobic001G434300--Sobic007G218800 Sobic003G219800 Sobic003G219800 Sobic001G434300--Sobic003G219800 Sobic001G038300 Sobic001G038300 Sobic001G434300--Sobic001G038300 Sobic003G316000 Sobic003G316000 Sobic001G434300--Sobic003G316000 Sobic001G310300 Sobic001G310300 Sobic001G434300--Sobic001G310300 Sobic005G061200 Sobic005G061200 Sobic001G434300--Sobic005G061200 Sobic009G181800 Sobic009G181800 Sobic001G434300--Sobic009G181800 Sobic001G434300--Sobic001G418100 Sobic001G409100--Sobic002G396400 Sobic001G409100--Sobic003G410800 Sobic001G409100--Sobic004G221300 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G409100--Sobic001G224300 Sobic001G409100--Sobic001G038300 Sobic001G409100--Sobic010G180100 Sobic001G409100--Sobic009G220100 Sobic001G532200 Sobic001G532200 Sobic004G042700--Sobic001G532200 Sobic003G037800 Sobic003G037800 Sobic004G042700--Sobic003G037800 Sobic004G042700--Sobic010G052200 Sobic004G212300 Sobic004G212300 Sobic004G042700--Sobic004G212300 Sobic001G516600 Sobic001G516600 Sobic004G042700--Sobic001G516600 Sobic003G319500 Sobic003G319500 Sobic004G042700--Sobic003G319500 Sobic002G245900 Sobic002G245900 Sobic004G042700--Sobic002G245900 Sobic002G202600 Sobic002G202600 Sobic004G042700--Sobic002G202600 Sobic002G176100 Sobic002G176100 Sobic004G042700--Sobic002G176100 Sobic001G360800--Sobic004G221300 Sobic001G360800--Sobic009G034300 Sobic001G360800--Sobic002G203900 Sobic001G360800--Sobic002G167600 Sobic001G360800--Sobic006G036400 Sobic001G360800--Sobic001G409100 Sobic001G360800--Sobic001G224300 Sobic001G360800--Sobic003G296400 Sobic002G207200 Sobic002G207200 Sobic001G360800--Sobic002G207200 Sobic010G052200--Sobic004G212300 Sobic001G084100 Sobic001G084100 Sobic010G052200--Sobic001G084100 Sobic010G052200--Sobic001G532200 Sobic010G052200--Sobic002G128800 Sobic007G124301 Sobic007G124301 Sobic010G052200--Sobic007G124301 Sobic010G252401 Sobic010G252401 Sobic010G052200--Sobic010G252401 Sobic010G052200--Sobic003G037800 Sobic005G113300 Sobic005G113300 Sobic010G052200--Sobic005G113300 Sobic006G156000 Sobic006G156000 Sobic010G052200--Sobic006G156000 Sobic009G105300 Sobic009G105300 Sobic009G054301--Sobic009G105300 Sobic009G162700 Sobic009G162700 Sobic009G054301--Sobic009G162700 Sobic007G154300 Sobic007G154300 Sobic009G054301--Sobic007G154300 Sobic003G387500 Sobic003G387500 Sobic009G054301--Sobic003G387500 Sobic009G054301--Sobic004G244600 Sobic009G054301--Sobic001G224300 Sobic005G087200 Sobic005G087200 Sobic009G054301--Sobic005G087200 Sobic009G054301--Sobic006G036400 Sobic002G218900 Sobic002G218900 Sobic009G054301--Sobic002G218900
Octagon: transcription factors


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