Gene annotation
Transcriptome id Sobic.004G323200.1
Synonym Sb04g035330
Functional annotation SCP-like extracellular protein, expressed
UniProt C5XU95
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF229
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25780 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os02g54560.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a022393
Brachypodium KQK13769
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G080200 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
3 Sobic.006G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-D-xylosidase, putative, expressed K15920: xylan 1,4-beta-xylosidase
4 Sobic.010G241100 thaumatin family domain containing protein, expressed -
5 Sobic.003G320300 ZOS1-12 - C2H2 zinc finger protein, expressed -
6 Sobic.004G238801 - -
7 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
8 Sobic.001G146900 expressed protein -
9 Sobic.002G146601 - -
10 Sobic.010G178300 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
11 Sobic.005G140100 - -
12 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
13 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
14 Sobic.005G157300 protein binding protein, putative, expressed -
15 Sobic.010G269700 expressed protein -
16 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
17 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.002G383100 expressed protein -
19 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
20 Sobic.002G362700 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic004G323200 Sobic004G323200 Sobic001G080200 Sobic001G080200 Sobic004G323200--Sobic001G080200 Sobic010G079100 Sobic010G079100 Sobic004G323200--Sobic010G079100 Sobic006G235600 Sobic006G235600 Sobic004G323200--Sobic006G235600 Sobic010G241100 Sobic010G241100 Sobic004G323200--Sobic010G241100 Sobic003G320300 Sobic003G320300 Sobic004G323200--Sobic003G320300 Sobic004G238801 Sobic004G238801 Sobic004G323200--Sobic004G238801 Sobic010G086000 Sobic010G086000 Sobic004G323200--Sobic010G086000 Sobic001G146900 Sobic001G146900 Sobic004G323200--Sobic001G146900 Sobic002G146601 Sobic002G146601 Sobic004G323200--Sobic002G146601 Sobic003G283600 Sobic003G283600 Sobic001G080200--Sobic003G283600 Sobic001G123100 Sobic001G123100 Sobic001G080200--Sobic001G123100 Sobic006G133700 Sobic006G133700 Sobic001G080200--Sobic006G133700 Sobic001G452900 Sobic001G452900 Sobic001G080200--Sobic001G452900 Sobic001G083500 Sobic001G083500 Sobic001G080200--Sobic001G083500 Sobic002G337600 Sobic002G337600 Sobic001G080200--Sobic002G337600 Sobic001G080200--Sobic010G241100 Sobic001G080200--Sobic010G086000 Sobic002G284100 Sobic002G284100 Sobic001G080200--Sobic002G284100 Sobic003G289800 Sobic003G289800 Sobic010G079100--Sobic003G289800 Sobic003G412800 Sobic003G412800 Sobic010G079100--Sobic003G412800 Sobic001G369800 Sobic001G369800 Sobic010G079100--Sobic001G369800 Sobic009G172950 Sobic009G172950 Sobic010G079100--Sobic009G172950 Sobic003G389100 Sobic003G389100 Sobic010G079100--Sobic003G389100 Sobic001G169800 Sobic001G169800 Sobic010G079100--Sobic001G169800 Sobic003G183700 Sobic003G183700 Sobic010G079100--Sobic003G183700 Sobic001G051300 Sobic001G051300 Sobic010G079100--Sobic001G051300 Sobic003G179500 Sobic003G179500 Sobic010G079100--Sobic003G179500 Sobic003G361200 Sobic003G361200 Sobic006G235600--Sobic003G361200 Sobic006G235600--Sobic003G289800 Sobic001G456500 Sobic001G456500 Sobic006G235600--Sobic001G456500 Sobic002G272300 Sobic002G272300 Sobic006G235600--Sobic002G272300 Sobic004G331600 Sobic004G331600 Sobic006G235600--Sobic004G331600 Sobic009G087000 Sobic009G087000 Sobic006G235600--Sobic009G087000 Sobic008G129200 Sobic008G129200 Sobic006G235600--Sobic008G129200 Sobic006G235600--Sobic004G238801 Sobic010G156100 Sobic010G156100 Sobic006G235600--Sobic010G156100 Sobic010G192500 Sobic010G192500 Sobic010G241100--Sobic010G192500 Sobic010G241100--Sobic010G086000 Sobic003G032200 Sobic003G032200 Sobic010G241100--Sobic003G032200 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic007G008300 Sobic007G008300 Sobic003G320300--Sobic007G008300 Sobic004G108400 Sobic004G108400 Sobic003G320300--Sobic004G108400 Sobic010G269700 Sobic010G269700 Sobic003G320300--Sobic010G269700 Sobic003G320300--Sobic001G452900 Sobic003G320300--Sobic009G172950 Sobic005G157300 Sobic005G157300 Sobic003G320300--Sobic005G157300 Sobic001G295400 Sobic001G295400 Sobic003G320300--Sobic001G295400 Sobic003G373900 Sobic003G373900 Sobic003G320300--Sobic003G373900 Sobic003G320300--Sobic004G238801 Sobic007G121650 Sobic007G121650 Sobic004G238801--Sobic007G121650 Sobic010G178300 Sobic010G178300 Sobic004G238801--Sobic010G178300 Sobic004G238801--Sobic005G157300 Sobic010G204700 Sobic010G204700 Sobic004G238801--Sobic010G204700 Sobic004G238801--Sobic002G272300 Sobic001G148450 Sobic001G148450 Sobic004G238801--Sobic001G148450 Sobic001G377700 Sobic001G377700 Sobic004G238801--Sobic001G377700 Sobic004G238801--Sobic003G320300 Sobic001G439400 Sobic001G439400 Sobic004G238801--Sobic001G439400 Sobic006G142500 Sobic006G142500 Sobic010G086000--Sobic006G142500 Sobic010G086000--Sobic003G032200 Sobic010G086000--Sobic010G241100 Sobic010G086000--Sobic001G452900 Sobic010G086000--Sobic010G192500 Sobic004G234500 Sobic004G234500 Sobic010G086000--Sobic004G234500 Sobic004G267600 Sobic004G267600 Sobic010G086000--Sobic004G267600 Sobic010G086000--Sobic002G284100 Sobic001G054700 Sobic001G054700 Sobic010G086000--Sobic001G054700 Sobic001G146900--Sobic009G172950 Sobic001G146900--Sobic009G087000 Sobic001G146900--Sobic003G183700 Sobic001G146900--Sobic001G456500 Sobic001G083300 Sobic001G083300 Sobic001G146900--Sobic001G083300 Sobic002G303800 Sobic002G303800 Sobic001G146900--Sobic002G303800 Sobic003G444300 Sobic003G444300 Sobic001G146900--Sobic003G444300 Sobic004G321400 Sobic004G321400 Sobic001G146900--Sobic004G321400 Sobic001G146900--Sobic001G169800 Sobic005G144600 Sobic005G144600 Sobic002G146601--Sobic005G144600 Sobic002G146601--Sobic002G394500 Sobic007G154500 Sobic007G154500 Sobic002G146601--Sobic007G154500 Sobic007G168900 Sobic007G168900 Sobic002G146601--Sobic007G168900 Sobic002G383100 Sobic002G383100 Sobic002G146601--Sobic002G383100 Sobic002G146601--Sobic010G241100 Sobic002G146601--Sobic003G179500 Sobic003G444100 Sobic003G444100 Sobic002G146601--Sobic003G444100 Sobic006G116500 Sobic006G116500 Sobic002G146601--Sobic006G116500
Octagon: transcription factors


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