Gene annotation
Transcriptome id Sobic.004G332600.1
Synonym Sb04g036130
Functional annotation OsFBL15 - F-box domain and LRR containing protein, expressed
UniProt A0A194YSW8
Pfam -
Panther DB PTHR24006
NCBI CDD KOG1947; Leucine rich repeat proteins, some proteins contain F-box
KEGG Orthology K10268; F-box and leucine-rich repeat protein 2/20
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80570 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g30210.1 : OsFBL15 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ86553 , PNT62617 , KQJ86550 , KQJ86549 , KQK01179
Barley HORVU6Hr1G086430.3 , HORVU6Hr1G086430.2 , HORVU6Hr1G086430.1 , HORVU6Hr1G086430.7 , HORVU6Hr1G086430.6 , HORVU6Hr1G086430.5 , HORVU6Hr1G086430.4 , HORVU6Hr1G086430.9 , HORVU6Hr1G086430.8
Wheat TraesCS5D02G112200 , TraesCS1B02G008600 , TraesCS1B02G008600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G007900 - -
2 Sobic.009G014000 expressed protein -
3 Sobic.009G152140 - -
4 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
5 Sobic.005G030000 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.006G106600 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
7 Sobic.006G192332 - -
8 Sobic.003G396700 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
9 Sobic.004G071500 OsFBX49 - F-box domain containing protein, expressed -
10 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
11 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
12 Sobic.002G078100 PPR repeat domain containing protein, putative, expressed -
13 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
14 Sobic.008G180400 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
15 Sobic.005G087300 protein kinase family protein, putative, expressed -
16 Sobic.007G186400 resistance protein, putative, expressed -
17 Sobic.006G257600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
18 Sobic.010G227000 pentatricopeptide, putative, expressed -
19 Sobic.009G184600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -


Gene co-expression network
sample Sobic004G332600 Sobic004G332600 Sobic010G007900 Sobic010G007900 Sobic004G332600--Sobic010G007900 Sobic009G014000 Sobic009G014000 Sobic004G332600--Sobic009G014000 Sobic009G152140 Sobic009G152140 Sobic004G332600--Sobic009G152140 Sobic003G423800 Sobic003G423800 Sobic004G332600--Sobic003G423800 Sobic005G030000 Sobic005G030000 Sobic004G332600--Sobic005G030000 Sobic006G106600 Sobic006G106600 Sobic004G332600--Sobic006G106600 Sobic006G192332 Sobic006G192332 Sobic004G332600--Sobic006G192332 Sobic003G396700 Sobic003G396700 Sobic004G332600--Sobic003G396700 Sobic004G071500 Sobic004G071500 Sobic004G332600--Sobic004G071500 Sobic003G023200 Sobic003G023200 Sobic010G007900--Sobic003G023200 Sobic009G040250 Sobic009G040250 Sobic010G007900--Sobic009G040250 Sobic005G087300 Sobic005G087300 Sobic010G007900--Sobic005G087300 Sobic006G119900 Sobic006G119900 Sobic010G007900--Sobic006G119900 Sobic003G183466 Sobic003G183466 Sobic010G007900--Sobic003G183466 Sobic010G007900--Sobic006G192332 Sobic010G007900--Sobic004G332600 Sobic009G123700 Sobic009G123700 Sobic010G007900--Sobic009G123700 Sobic007G122700 Sobic007G122700 Sobic010G007900--Sobic007G122700 Sobic007G186400 Sobic007G186400 Sobic009G014000--Sobic007G186400 Sobic004G215600 Sobic004G215600 Sobic009G014000--Sobic004G215600 Sobic009G014000--Sobic006G106600 Sobic004G000400 Sobic004G000400 Sobic009G014000--Sobic004G000400 Sobic002G066800 Sobic002G066800 Sobic009G014000--Sobic002G066800 Sobic009G014000--Sobic003G183466 Sobic009G014000--Sobic005G087300 Sobic002G426100 Sobic002G426100 Sobic009G014000--Sobic002G426100 Sobic001G242300 Sobic001G242300 Sobic009G014000--Sobic001G242300 Sobic010G157200 Sobic010G157200 Sobic009G152140--Sobic010G157200 Sobic010G009700 Sobic010G009700 Sobic009G152140--Sobic010G009700 Sobic003G044000 Sobic003G044000 Sobic009G152140--Sobic003G044000 Sobic003G090000 Sobic003G090000 Sobic009G152140--Sobic003G090000 Sobic004G031100 Sobic004G031100 Sobic009G152140--Sobic004G031100 Sobic007G060100 Sobic007G060100 Sobic009G152140--Sobic007G060100 Sobic009G054400 Sobic009G054400 Sobic009G152140--Sobic009G054400 Sobic001G076600 Sobic001G076600 Sobic009G152140--Sobic001G076600 Sobic003G293400 Sobic003G293400 Sobic009G152140--Sobic003G293400 Sobic008G180400 Sobic008G180400 Sobic003G423800--Sobic008G180400 Sobic008G180200 Sobic008G180200 Sobic003G423800--Sobic008G180200 Sobic010G222800 Sobic010G222800 Sobic003G423800--Sobic010G222800 Sobic009G012400 Sobic009G012400 Sobic003G423800--Sobic009G012400 Sobic003G343200 Sobic003G343200 Sobic003G423800--Sobic003G343200 Sobic003G129500 Sobic003G129500 Sobic003G423800--Sobic003G129500 Sobic003G423800--Sobic010G009700 Sobic002G112000 Sobic002G112000 Sobic003G423800--Sobic002G112000 Sobic007G014100 Sobic007G014100 Sobic003G423800--Sobic007G014100 Sobic005G030000--Sobic004G332600 Sobic009G260650 Sobic009G260650 Sobic005G030000--Sobic009G260650 Sobic005G030000--Sobic004G071500 Sobic010G227000 Sobic010G227000 Sobic005G030000--Sobic010G227000 Sobic005G030000--Sobic010G007900 Sobic005G030000--Sobic004G215600 Sobic005G030000--Sobic009G014000 Sobic004G126601 Sobic004G126601 Sobic005G030000--Sobic004G126601 Sobic004G278900 Sobic004G278900 Sobic005G030000--Sobic004G278900 Sobic006G106600--Sobic004G000400 Sobic002G173400 Sobic002G173400 Sobic006G106600--Sobic002G173400 Sobic006G106600--Sobic007G186400 Sobic006G106600--Sobic004G215600 Sobic001G229300 Sobic001G229300 Sobic006G106600--Sobic001G229300 Sobic001G191900 Sobic001G191900 Sobic006G106600--Sobic001G191900 Sobic002G271400 Sobic002G271400 Sobic006G106600--Sobic002G271400 Sobic010G030000 Sobic010G030000 Sobic006G106600--Sobic010G030000 Sobic008G131900 Sobic008G131900 Sobic006G106600--Sobic008G131900 Sobic001G475000 Sobic001G475000 Sobic006G192332--Sobic001G475000 Sobic006G192332--Sobic003G396700 Sobic001G340000 Sobic001G340000 Sobic006G192332--Sobic001G340000 Sobic007G154350 Sobic007G154350 Sobic006G192332--Sobic007G154350 Sobic003G388000 Sobic003G388000 Sobic006G192332--Sobic003G388000 Sobic004G146100 Sobic004G146100 Sobic006G192332--Sobic004G146100 Sobic006G192332--Sobic009G040250 Sobic009G000100 Sobic009G000100 Sobic006G192332--Sobic009G000100 Sobic002G241600 Sobic002G241600 Sobic006G192332--Sobic002G241600 Sobic003G396700--Sobic003G129500 Sobic003G396700--Sobic003G388000 Sobic008G063600 Sobic008G063600 Sobic003G396700--Sobic008G063600 Sobic002G043000 Sobic002G043000 Sobic003G396700--Sobic002G043000 Sobic003G396700--Sobic006G192332 Sobic008G111600 Sobic008G111600 Sobic003G396700--Sobic008G111600 Sobic003G396700--Sobic002G426100 Sobic006G181800 Sobic006G181800 Sobic003G396700--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic003G396700--Sobic002G078100 Sobic005G046250 Sobic005G046250 Sobic004G071500--Sobic005G046250 Sobic001G152700 Sobic001G152700 Sobic004G071500--Sobic001G152700 Sobic004G071500--Sobic004G000400 Sobic004G071500--Sobic001G229300 Sobic010G160300 Sobic010G160300 Sobic004G071500--Sobic010G160300 Sobic006G239400 Sobic006G239400 Sobic004G071500--Sobic006G239400 Sobic001G034500 Sobic001G034500 Sobic004G071500--Sobic001G034500 Sobic004G071500--Sobic005G087300 Sobic004G071500--Sobic006G106600
Octagon: transcription factors


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