Gene annotation
Transcriptome id Sobic.005G147300.1
Synonym
Functional annotation -
UniProt A0A1B6PSJ4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G087500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
2 Sobic.004G188800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
3 Sobic.004G123400 MYB family transcription factor, putative, expressed K09420: MYB, transcriptional activator Myb
4 Sobic.010G027900 - -
5 Sobic.003G029800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
6 Sobic.003G235400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
7 Sobic.001G120600 - -
8 Sobic.003G120800 expressed protein -
9 Sobic.002G244800 - -
10 Sobic.002G261600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
11 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
12 Sobic.003G338300 - -
13 Sobic.005G045700 PHD-finger family protein, expressed -
14 Sobic.007G103666 - -
15 Sobic.006G047700 "Gene located in Ma1, a phosphatidylethanolamine-binding (PEBP) protein domain, "(PubMedID : 27335143)@osFTL13 FT-Like13 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
16 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
17 Sobic.003G084000 transporter family protein, putative, expressed -
18 Sobic.004G146100 C2 domain containing protein, putative, expressed -
19 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.001G254700 TPD1, putative, expressed -


Gene co-expression network
sample Sobic005G147300 Sobic005G147300 Sobic004G087500 Sobic004G087500 Sobic005G147300--Sobic004G087500 Sobic004G188800 Sobic004G188800 Sobic005G147300--Sobic004G188800 Sobic004G123400 Sobic004G123400 Sobic005G147300--Sobic004G123400 Sobic010G027900 Sobic010G027900 Sobic005G147300--Sobic010G027900 Sobic003G029800 Sobic003G029800 Sobic005G147300--Sobic003G029800 Sobic003G235400 Sobic003G235400 Sobic005G147300--Sobic003G235400 Sobic001G120600 Sobic001G120600 Sobic005G147300--Sobic001G120600 Sobic003G120800 Sobic003G120800 Sobic005G147300--Sobic003G120800 Sobic002G244800 Sobic002G244800 Sobic005G147300--Sobic002G244800 Sobic001G520400 Sobic001G520400 Sobic004G087500--Sobic001G520400 Sobic004G087500--Sobic003G029800 Sobic007G216201 Sobic007G216201 Sobic004G087500--Sobic007G216201 Sobic002G223401 Sobic002G223401 Sobic004G087500--Sobic002G223401 Sobic004G060900 Sobic004G060900 Sobic004G087500--Sobic004G060900 Sobic007G103666 Sobic007G103666 Sobic004G087500--Sobic007G103666 Sobic002G403500 Sobic002G403500 Sobic004G087500--Sobic002G403500 Sobic003G158300 Sobic003G158300 Sobic004G087500--Sobic003G158300 Sobic010G205500 Sobic010G205500 Sobic004G087500--Sobic010G205500 Sobic003G338300 Sobic003G338300 Sobic004G188800--Sobic003G338300 Sobic004G188800--Sobic003G029800 Sobic004G188800--Sobic003G235400 Sobic001G280000 Sobic001G280000 Sobic004G188800--Sobic001G280000 Sobic001G227800 Sobic001G227800 Sobic004G188800--Sobic001G227800 Sobic002G215700 Sobic002G215700 Sobic004G188800--Sobic002G215700 Sobic003G148800 Sobic003G148800 Sobic004G188800--Sobic003G148800 Sobic002G058500 Sobic002G058500 Sobic004G188800--Sobic002G058500 Sobic004G101900 Sobic004G101900 Sobic004G188800--Sobic004G101900 Sobic004G040200 Sobic004G040200 Sobic004G123400--Sobic004G040200 Sobic001G375600 Sobic001G375600 Sobic004G123400--Sobic001G375600 Sobic004G277200 Sobic004G277200 Sobic004G123400--Sobic004G277200 Sobic007G225100 Sobic007G225100 Sobic004G123400--Sobic007G225100 Sobic004G332400 Sobic004G332400 Sobic004G123400--Sobic004G332400 Sobic008G002500 Sobic008G002500 Sobic004G123400--Sobic008G002500 Sobic006G040800 Sobic006G040800 Sobic004G123400--Sobic006G040800 Sobic003G294600 Sobic003G294600 Sobic004G123400--Sobic003G294600 Sobic002G111600 Sobic002G111600 Sobic004G123400--Sobic002G111600 Sobic001G191700 Sobic001G191700 Sobic010G027900--Sobic001G191700 Sobic003G217200 Sobic003G217200 Sobic010G027900--Sobic003G217200 Sobic001G063700 Sobic001G063700 Sobic010G027900--Sobic001G063700 Sobic001G299700 Sobic001G299700 Sobic010G027900--Sobic001G299700 Sobic002G105700 Sobic002G105700 Sobic010G027900--Sobic002G105700 Sobic010G027900--Sobic004G332400 Sobic010G027900--Sobic006G040800 Sobic010G027900--Sobic004G123400 Sobic001G400500 Sobic001G400500 Sobic010G027900--Sobic001G400500 Sobic003G029800--Sobic007G103666 Sobic003G029800--Sobic001G520400 Sobic009G229800 Sobic009G229800 Sobic003G029800--Sobic009G229800 Sobic003G029800--Sobic004G060900 Sobic003G029800--Sobic004G087500 Sobic005G024700 Sobic005G024700 Sobic003G029800--Sobic005G024700 Sobic009G057300 Sobic009G057300 Sobic003G029800--Sobic009G057300 Sobic003G428400 Sobic003G428400 Sobic003G029800--Sobic003G428400 Sobic003G029800--Sobic004G188800 Sobic002G261600 Sobic002G261600 Sobic003G235400--Sobic002G261600 Sobic006G012000 Sobic006G012000 Sobic003G235400--Sobic006G012000 Sobic007G053100 Sobic007G053100 Sobic003G235400--Sobic007G053100 Sobic002G075000 Sobic002G075000 Sobic003G235400--Sobic002G075000 Sobic003G235400--Sobic004G188800 Sobic001G125400 Sobic001G125400 Sobic003G235400--Sobic001G125400 Sobic006G251500 Sobic006G251500 Sobic003G235400--Sobic006G251500 Sobic003G384600 Sobic003G384600 Sobic003G235400--Sobic003G384600 Sobic003G427300 Sobic003G427300 Sobic003G235400--Sobic003G427300 Sobic002G366300 Sobic002G366300 Sobic001G120600--Sobic002G366300 Sobic005G045700 Sobic005G045700 Sobic001G120600--Sobic005G045700 Sobic001G120600--Sobic001G125400 Sobic002G305300 Sobic002G305300 Sobic001G120600--Sobic002G305300 Sobic008G165300 Sobic008G165300 Sobic001G120600--Sobic008G165300 Sobic002G054400 Sobic002G054400 Sobic001G120600--Sobic002G054400 Sobic010G179300 Sobic010G179300 Sobic001G120600--Sobic010G179300 Sobic008G191850 Sobic008G191850 Sobic001G120600--Sobic008G191850 Sobic002G127900 Sobic002G127900 Sobic001G120600--Sobic002G127900 Sobic003G120800--Sobic004G123400 Sobic003G120800--Sobic004G332400 Sobic003G007300 Sobic003G007300 Sobic003G120800--Sobic003G007300 Sobic002G126300 Sobic002G126300 Sobic003G120800--Sobic002G126300 Sobic003G120800--Sobic008G002500 Sobic003G120800--Sobic003G294600 Sobic008G088851 Sobic008G088851 Sobic003G120800--Sobic008G088851 Sobic005G178800 Sobic005G178800 Sobic003G120800--Sobic005G178800 Sobic001G046500 Sobic001G046500 Sobic003G120800--Sobic001G046500 Sobic006G047700 Sobic006G047700 Sobic002G244800--Sobic006G047700 Sobic005G073700 Sobic005G073700 Sobic002G244800--Sobic005G073700 Sobic010G054800 Sobic010G054800 Sobic002G244800--Sobic010G054800 Sobic003G100000 Sobic003G100000 Sobic002G244800--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic002G244800--Sobic001G254700 Sobic004G254500 Sobic004G254500 Sobic002G244800--Sobic004G254500 Sobic007G050900 Sobic007G050900 Sobic002G244800--Sobic007G050900 Sobic010G195450 Sobic010G195450 Sobic002G244800--Sobic010G195450 Sobic002G197800 Sobic002G197800 Sobic002G244800--Sobic002G197800
Octagon: transcription factors


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