Gene annotation
Transcriptome id Sobic.005G216200.1
Synonym Sb05g026730
Functional annotation O-methyltransferase, putative, expressed
UniProt C5Y7Z4
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF107
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35160 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os11g33300.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT72870 , KQJ96042
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
2 Sobic.010G117600 DUF538 domain containing protein, putative, expressed -
3 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
4 Sobic.010G117300 DUF538 domain containing protein, putative, expressed -
5 Sobic.006G255400 glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
6 Sobic.004G008900 Sphingoid base hydroxylase 2 SBH2 (At)(PubMedID : 27208977)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
7 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
8 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
9 Sobic.001G234900 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
10 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.005G222500 phospholipase D, putative, expressed K01115: phospholipase D1/2
12 Sobic.010G128700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
14 Sobic.001G242100 expressed protein -
15 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
16 Sobic.001G342400 SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed -
17 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
18 Sobic.006G234466 - -
19 Sobic.001G261509 - K09872: aquaporin PIP
20 Sobic.007G158800 patatin, putative, expressed -


Gene co-expression network
sample Sobic005G216200 Sobic005G216200 Sobic010G117800 Sobic010G117800 Sobic005G216200--Sobic010G117800 Sobic010G117600 Sobic010G117600 Sobic005G216200--Sobic010G117600 Sobic010G117500 Sobic010G117500 Sobic005G216200--Sobic010G117500 Sobic010G117300 Sobic010G117300 Sobic005G216200--Sobic010G117300 Sobic006G255400 Sobic006G255400 Sobic005G216200--Sobic006G255400 Sobic004G008900 Sobic004G008900 Sobic005G216200--Sobic004G008900 Sobic007G158600 Sobic007G158600 Sobic005G216200--Sobic007G158600 Sobic002G391800 Sobic002G391800 Sobic005G216200--Sobic002G391800 Sobic001G234900 Sobic001G234900 Sobic005G216200--Sobic001G234900 Sobic010G117800--Sobic010G117600 Sobic010G117800--Sobic005G216200 Sobic010G117800--Sobic010G117300 Sobic010G117800--Sobic007G158600 Sobic005G066100 Sobic005G066100 Sobic010G117800--Sobic005G066100 Sobic002G425000 Sobic002G425000 Sobic010G117800--Sobic002G425000 Sobic008G127933 Sobic008G127933 Sobic010G117800--Sobic008G127933 Sobic005G160700 Sobic005G160700 Sobic010G117800--Sobic005G160700 SobicK026900 SobicK026900 Sobic010G117800--SobicK026900 Sobic010G117600--Sobic010G117800 Sobic010G117600--Sobic005G216200 Sobic010G117600--Sobic010G117300 Sobic003G364200 Sobic003G364200 Sobic010G117600--Sobic003G364200 Sobic010G117600--Sobic005G066100 Sobic008G128200 Sobic008G128200 Sobic010G117600--Sobic008G128200 Sobic005G066432 Sobic005G066432 Sobic010G117600--Sobic005G066432 Sobic008G128066 Sobic008G128066 Sobic010G117600--Sobic008G128066 Sobic006G079300 Sobic006G079300 Sobic010G117600--Sobic006G079300 Sobic003G204400 Sobic003G204400 Sobic010G117500--Sobic003G204400 Sobic004G008300 Sobic004G008300 Sobic010G117500--Sobic004G008300 Sobic010G117500--Sobic004G008900 Sobic003G204300 Sobic003G204300 Sobic010G117500--Sobic003G204300 Sobic009G076300 Sobic009G076300 Sobic010G117500--Sobic009G076300 Sobic010G117500--Sobic010G117800 Sobic010G117500--Sobic005G216200 Sobic006G168100 Sobic006G168100 Sobic010G117500--Sobic006G168100 Sobic003G097400 Sobic003G097400 Sobic010G117500--Sobic003G097400 Sobic010G117300--Sobic010G117800 Sobic010G117300--Sobic010G117600 Sobic010G117300--Sobic005G216200 Sobic002G329100 Sobic002G329100 Sobic010G117300--Sobic002G329100 Sobic007G078100 Sobic007G078100 Sobic010G117300--Sobic007G078100 Sobic002G126600 Sobic002G126600 Sobic010G117300--Sobic002G126600 Sobic006G199100 Sobic006G199100 Sobic010G117300--Sobic006G199100 Sobic009G043600 Sobic009G043600 Sobic010G117300--Sobic009G043600 Sobic001G196300 Sobic001G196300 Sobic010G117300--Sobic001G196300 Sobic008G009400 Sobic008G009400 Sobic006G255400--Sobic008G009400 Sobic004G297900 Sobic004G297900 Sobic006G255400--Sobic004G297900 Sobic006G235200 Sobic006G235200 Sobic006G255400--Sobic006G235200 Sobic010G270700 Sobic010G270700 Sobic006G255400--Sobic010G270700 Sobic002G301900 Sobic002G301900 Sobic006G255400--Sobic002G301900 Sobic002G183700 Sobic002G183700 Sobic006G255400--Sobic002G183700 Sobic004G295100 Sobic004G295100 Sobic006G255400--Sobic004G295100 Sobic003G311800 Sobic003G311800 Sobic006G255400--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic006G255400--Sobic009G109000 Sobic004G008900--Sobic010G117500 Sobic004G008900--Sobic003G204400 Sobic004G008900--Sobic004G008300 Sobic004G008900--Sobic003G204300 Sobic010G126900 Sobic010G126900 Sobic004G008900--Sobic010G126900 Sobic004G008900--Sobic003G097400 Sobic004G008900--Sobic009G076300 Sobic004G008900--Sobic005G216200 Sobic010G126800 Sobic010G126800 Sobic004G008900--Sobic010G126800 Sobic001G438200 Sobic001G438200 Sobic007G158600--Sobic001G438200 Sobic008G019800 Sobic008G019800 Sobic007G158600--Sobic008G019800 Sobic003G319400 Sobic003G319400 Sobic007G158600--Sobic003G319400 Sobic003G282200 Sobic003G282200 Sobic007G158600--Sobic003G282200 Sobic005G202300 Sobic005G202300 Sobic007G158600--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic007G158600--Sobic001G058300 Sobic005G222500 Sobic005G222500 Sobic007G158600--Sobic005G222500 Sobic007G158600--Sobic005G160700 Sobic007G158600--Sobic002G183700 Sobic002G391800--Sobic001G234900 Sobic002G391800--Sobic005G160700 Sobic001G342400 Sobic001G342400 Sobic002G391800--Sobic001G342400 Sobic001G242100 Sobic001G242100 Sobic002G391800--Sobic001G242100 Sobic001G379400 Sobic001G379400 Sobic002G391800--Sobic001G379400 Sobic001G232700 Sobic001G232700 Sobic002G391800--Sobic001G232700 Sobic002G377600 Sobic002G377600 Sobic002G391800--Sobic002G377600 Sobic002G391800--Sobic005G222500 Sobic010G045500 Sobic010G045500 Sobic002G391800--Sobic010G045500 Sobic001G234900--Sobic001G342400 Sobic001G234900--Sobic001G379400 Sobic001G234900--Sobic002G391800 Sobic010G147200 Sobic010G147200 Sobic001G234900--Sobic010G147200 Sobic006G089000 Sobic006G089000 Sobic001G234900--Sobic006G089000 Sobic003G183600 Sobic003G183600 Sobic001G234900--Sobic003G183600 Sobic001G234900--Sobic005G160700 Sobic001G234900--Sobic001G242100 Sobic001G502000 Sobic001G502000 Sobic001G234900--Sobic001G502000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.