Gene annotation
Transcriptome id Sobic.010G117800.1
Synonym Sb10g010410
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
DUF538 domain containing protein, putative, expressed
UniProt C5Z8L9
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os07g02850.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009479 , Zm00025a044909 , Zm00025a009480 , Zm00025a044910
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117600 DUF538 domain containing protein, putative, expressed -
2 Sobic.005G216200 O-methyltransferase, putative, expressed -
3 Sobic.010G117300 DUF538 domain containing protein, putative, expressed -
4 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
5 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.002G425000 VQ domain containing protein, putative, expressed -
7 Sobic.008G127933 - -
8 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
11 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.001G238300 expansin precursor, putative, expressed -
14 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
15 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
16 Sobic.004G148300 Cupin domain containing protein, expressed -
17 Sobic.008G019800 - -
18 Sobic.007G090469 - -
19 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
20 Sobic.001G237900 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic010G117800 Sobic010G117800 Sobic010G117600 Sobic010G117600 Sobic010G117800--Sobic010G117600 Sobic005G216200 Sobic005G216200 Sobic010G117800--Sobic005G216200 Sobic010G117300 Sobic010G117300 Sobic010G117800--Sobic010G117300 Sobic007G158600 Sobic007G158600 Sobic010G117800--Sobic007G158600 Sobic005G066100 Sobic005G066100 Sobic010G117800--Sobic005G066100 Sobic002G425000 Sobic002G425000 Sobic010G117800--Sobic002G425000 Sobic008G127933 Sobic008G127933 Sobic010G117800--Sobic008G127933 Sobic005G160700 Sobic005G160700 Sobic010G117800--Sobic005G160700 SobicK026900 SobicK026900 Sobic010G117800--SobicK026900 Sobic010G117600--Sobic010G117800 Sobic010G117600--Sobic005G216200 Sobic010G117600--Sobic010G117300 Sobic003G364200 Sobic003G364200 Sobic010G117600--Sobic003G364200 Sobic010G117600--Sobic005G066100 Sobic008G128200 Sobic008G128200 Sobic010G117600--Sobic008G128200 Sobic005G066432 Sobic005G066432 Sobic010G117600--Sobic005G066432 Sobic008G128066 Sobic008G128066 Sobic010G117600--Sobic008G128066 Sobic006G079300 Sobic006G079300 Sobic010G117600--Sobic006G079300 Sobic005G216200--Sobic010G117800 Sobic005G216200--Sobic010G117600 Sobic010G117500 Sobic010G117500 Sobic005G216200--Sobic010G117500 Sobic005G216200--Sobic010G117300 Sobic006G255400 Sobic006G255400 Sobic005G216200--Sobic006G255400 Sobic004G008900 Sobic004G008900 Sobic005G216200--Sobic004G008900 Sobic005G216200--Sobic007G158600 Sobic002G391800 Sobic002G391800 Sobic005G216200--Sobic002G391800 Sobic001G234900 Sobic001G234900 Sobic005G216200--Sobic001G234900 Sobic010G117300--Sobic010G117800 Sobic010G117300--Sobic010G117600 Sobic010G117300--Sobic005G216200 Sobic002G329100 Sobic002G329100 Sobic010G117300--Sobic002G329100 Sobic007G078100 Sobic007G078100 Sobic010G117300--Sobic007G078100 Sobic002G126600 Sobic002G126600 Sobic010G117300--Sobic002G126600 Sobic006G199100 Sobic006G199100 Sobic010G117300--Sobic006G199100 Sobic009G043600 Sobic009G043600 Sobic010G117300--Sobic009G043600 Sobic001G196300 Sobic001G196300 Sobic010G117300--Sobic001G196300 Sobic001G438200 Sobic001G438200 Sobic007G158600--Sobic001G438200 Sobic008G019800 Sobic008G019800 Sobic007G158600--Sobic008G019800 Sobic003G319400 Sobic003G319400 Sobic007G158600--Sobic003G319400 Sobic003G282200 Sobic003G282200 Sobic007G158600--Sobic003G282200 Sobic005G202300 Sobic005G202300 Sobic007G158600--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic007G158600--Sobic001G058300 Sobic005G222500 Sobic005G222500 Sobic007G158600--Sobic005G222500 Sobic007G158600--Sobic005G160700 Sobic002G183700 Sobic002G183700 Sobic007G158600--Sobic002G183700 Sobic005G066100--Sobic005G066432 Sobic004G202400 Sobic004G202400 Sobic005G066100--Sobic004G202400 Sobic005G065900 Sobic005G065900 Sobic005G066100--Sobic005G065900 Sobic005G066100--SobicK026900 Sobic007G204700 Sobic007G204700 Sobic005G066100--Sobic007G204700 Sobic005G066100--Sobic002G425000 Sobic010G148800 Sobic010G148800 Sobic005G066100--Sobic010G148800 Sobic005G066100--Sobic008G127933 Sobic010G158500 Sobic010G158500 Sobic005G066100--Sobic010G158500 Sobic001G238300 Sobic001G238300 Sobic002G425000--Sobic001G238300 Sobic002G261500 Sobic002G261500 Sobic002G425000--Sobic002G261500 Sobic002G425000--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic002G425000--Sobic001G237900 Sobic006G260200 Sobic006G260200 Sobic002G425000--Sobic006G260200 Sobic004G297900 Sobic004G297900 Sobic002G425000--Sobic004G297900 Sobic002G425000--SobicK026900 Sobic003G053400 Sobic003G053400 Sobic002G425000--Sobic003G053400 Sobic006G122800 Sobic006G122800 Sobic002G425000--Sobic006G122800 Sobic006G158400 Sobic006G158400 Sobic008G127933--Sobic006G158400 Sobic008G127933--Sobic002G425000 Sobic008G127933--Sobic001G237900 Sobic008G127933--Sobic007G204700 Sobic008G127933--Sobic008G128066 Sobic010G270700 Sobic010G270700 Sobic008G127933--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic008G127933--Sobic008G009400 Sobic001G238400 Sobic001G238400 Sobic008G127933--Sobic001G238400 Sobic008G127933--SobicK026900 Sobic005G160700--Sobic006G079300 Sobic001G379400 Sobic001G379400 Sobic005G160700--Sobic001G379400 Sobic005G160700--Sobic008G019800 Sobic001G242100 Sobic001G242100 Sobic005G160700--Sobic001G242100 Sobic005G160700--Sobic002G391800 Sobic005G160700--Sobic007G158600 Sobic006G089000 Sobic006G089000 Sobic005G160700--Sobic006G089000 Sobic001G502000 Sobic001G502000 Sobic005G160700--Sobic001G502000 Sobic004G322800 Sobic004G322800 Sobic005G160700--Sobic004G322800 SobicK026900--Sobic004G297900 Sobic007G090469 Sobic007G090469 SobicK026900--Sobic007G090469 SobicK026900--Sobic001G238300 Sobic006G202600 Sobic006G202600 SobicK026900--Sobic006G202600 SobicK026900--Sobic004G202400 SobicK026900--Sobic002G425000 SobicK026900--Sobic010G270700 SobicK026900--Sobic001G237900 Sobic004G295100 Sobic004G295100 SobicK026900--Sobic004G295100
Octagon: transcription factors


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