Gene annotation
Transcriptome id Sobic.006G018800.1
Synonym EIN4, Sb06g001740
Functional annotation ethylene receptor, putative, expressed
UniProt C5YC98
Pfam PF01590 PF00072
Panther DB PTHR24423 PTHR24423:SF530
NCBI CDD KOG0519; Sensory transduction histidine kinase
KEGG Orthology K14509; ETR, ethylene receptor
Gene Ontology GO:0005515; protein binding GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT3G04580 : Signal transduction histidine kinase, hybrid-type, ethylene sensor
RAP-DB (Rice) LOC_Os04g08740.2 : ethylene receptor, putative, expressed
MaizeGDB (Corn) Zm00025a048288 , Zm00025a055668 , Zm00025a012420
Brachypodium PNT60492 , PNT60491 , KQJ81436 , KQJ81437 , KQK01419
Barley HORVU2Hr1G000030.1 , HORVU0Hr1G001750.3 , HORVU0Hr1G001750.2 , HORVU0Hr1G001750.5 , HORVU0Hr1G001750.4 , HORVU6Hr1G091700.1 , HORVU6Hr1G091700.5 , HORVU6Hr1G091700.4 , HORVU6Hr1G091700.7 , HORVU6Hr1G091700.6 , HORVU6Hr1G091700.8 , HORVU6Hr1G071860.2 , HORVU6Hr1G071860.1
Wheat TraesCS6B02G360200 , TraesCS6D02G383600 , TraesCS6B02G314600 , TraesCS6A02G329400 , TraesCS2D02G000500 , TraesCS6B02G439600 , TraesCS6A02G285800 , TraesCS6A02G285800 , TraesCS2A02G000200 , TraesCS2B02G023800 , TraesCS6A02G399400 , TraesCS6A02G399400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G040700 transferase family domain containing protein, expressed -
2 Sobic.002G026300 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
3 Sobic.009G147800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patellin protein, putative, expressed -
4 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.006G174500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
6 Sobic.003G049300 expressed protein -
7 Sobic.001G206400 fiber protein Fb34, putative, expressed -
8 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
9 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.010G225100 DUF640 domain containing protein, putative, expressed -
11 Sobic.003G036000 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
12 Sobic.010G210300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
13 Sobic.001G403600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
14 Sobic.001G290400 no apical meristem protein, putative, expressed -
15 Sobic.010G228000 Protein kinase domain containing protein, expressed -
16 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
17 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
19 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
20 Sobic.001G469100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-06 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic006G018800 Sobic006G018800 Sobic010G040700 Sobic010G040700 Sobic006G018800--Sobic010G040700 Sobic002G026300 Sobic002G026300 Sobic006G018800--Sobic002G026300 Sobic009G147800 Sobic009G147800 Sobic006G018800--Sobic009G147800 Sobic010G236500 Sobic010G236500 Sobic006G018800--Sobic010G236500 Sobic006G174500 Sobic006G174500 Sobic006G018800--Sobic006G174500 Sobic003G049300 Sobic003G049300 Sobic006G018800--Sobic003G049300 Sobic001G206400 Sobic001G206400 Sobic006G018800--Sobic001G206400 Sobic002G272900 Sobic002G272900 Sobic006G018800--Sobic002G272900 Sobic005G139700 Sobic005G139700 Sobic006G018800--Sobic005G139700 Sobic010G040700--Sobic006G018800 Sobic010G040700--Sobic006G174500 Sobic003G431100 Sobic003G431100 Sobic010G040700--Sobic003G431100 Sobic003G087600 Sobic003G087600 Sobic010G040700--Sobic003G087600 Sobic008G150400 Sobic008G150400 Sobic010G040700--Sobic008G150400 Sobic009G173300 Sobic009G173300 Sobic010G040700--Sobic009G173300 Sobic004G189100 Sobic004G189100 Sobic010G040700--Sobic004G189100 Sobic002G424800 Sobic002G424800 Sobic010G040700--Sobic002G424800 Sobic008G135100 Sobic008G135100 Sobic010G040700--Sobic008G135100 Sobic003G036000 Sobic003G036000 Sobic002G026300--Sobic003G036000 Sobic007G101800 Sobic007G101800 Sobic002G026300--Sobic007G101800 Sobic010G105800 Sobic010G105800 Sobic002G026300--Sobic010G105800 Sobic010G228000 Sobic010G228000 Sobic002G026300--Sobic010G228000 Sobic010G225100 Sobic010G225100 Sobic002G026300--Sobic010G225100 Sobic010G041700 Sobic010G041700 Sobic002G026300--Sobic010G041700 Sobic009G208800 Sobic009G208800 Sobic002G026300--Sobic009G208800 Sobic003G035700 Sobic003G035700 Sobic002G026300--Sobic003G035700 Sobic007G188100 Sobic007G188100 Sobic002G026300--Sobic007G188100 Sobic005G010200 Sobic005G010200 Sobic009G147800--Sobic005G010200 Sobic003G019200 Sobic003G019200 Sobic009G147800--Sobic003G019200 Sobic001G330700 Sobic001G330700 Sobic009G147800--Sobic001G330700 Sobic010G246000 Sobic010G246000 Sobic009G147800--Sobic010G246000 Sobic010G220200 Sobic010G220200 Sobic009G147800--Sobic010G220200 Sobic006G230500 Sobic006G230500 Sobic009G147800--Sobic006G230500 Sobic009G077500 Sobic009G077500 Sobic009G147800--Sobic009G077500 Sobic001G399100 Sobic001G399100 Sobic009G147800--Sobic001G399100 Sobic009G147800--Sobic010G228000 Sobic006G076201 Sobic006G076201 Sobic010G236500--Sobic006G076201 Sobic004G145200 Sobic004G145200 Sobic010G236500--Sobic004G145200 Sobic003G095400 Sobic003G095400 Sobic010G236500--Sobic003G095400 Sobic003G294400 Sobic003G294400 Sobic010G236500--Sobic003G294400 Sobic001G012800 Sobic001G012800 Sobic010G236500--Sobic001G012800 Sobic006G064800 Sobic006G064800 Sobic010G236500--Sobic006G064800 Sobic001G409900 Sobic001G409900 Sobic010G236500--Sobic001G409900 Sobic006G087900 Sobic006G087900 Sobic010G236500--Sobic006G087900 Sobic009G241700 Sobic009G241700 Sobic010G236500--Sobic009G241700 Sobic006G174500--Sobic010G040700 Sobic005G136300 Sobic005G136300 Sobic006G174500--Sobic005G136300 Sobic005G117400 Sobic005G117400 Sobic006G174500--Sobic005G117400 Sobic001G074200 Sobic001G074200 Sobic006G174500--Sobic001G074200 Sobic001G401300 Sobic001G401300 Sobic006G174500--Sobic001G401300 Sobic003G216232 Sobic003G216232 Sobic006G174500--Sobic003G216232 Sobic006G174500--Sobic006G018800 Sobic001G236200 Sobic001G236200 Sobic006G174500--Sobic001G236200 Sobic006G174500--Sobic009G241700 Sobic002G242500 Sobic002G242500 Sobic003G049300--Sobic002G242500 Sobic003G049300--Sobic004G145200 Sobic003G049300--Sobic010G225100 Sobic003G049300--Sobic006G076201 Sobic002G210901 Sobic002G210901 Sobic003G049300--Sobic002G210901 Sobic009G149400 Sobic009G149400 Sobic003G049300--Sobic009G149400 Sobic003G049300--Sobic010G228000 Sobic009G155200 Sobic009G155200 Sobic003G049300--Sobic009G155200 Sobic003G049300--Sobic010G236500 Sobic009G033700 Sobic009G033700 Sobic001G206400--Sobic009G033700 Sobic001G516600 Sobic001G516600 Sobic001G206400--Sobic001G516600 Sobic002G245100 Sobic002G245100 Sobic001G206400--Sobic002G245100 Sobic003G037800 Sobic003G037800 Sobic001G206400--Sobic003G037800 Sobic009G200700 Sobic009G200700 Sobic001G206400--Sobic009G200700 Sobic002G374100 Sobic002G374100 Sobic001G206400--Sobic002G374100 Sobic010G268400 Sobic010G268400 Sobic001G206400--Sobic010G268400 Sobic010G086200 Sobic010G086200 Sobic001G206400--Sobic010G086200 Sobic001G281400 Sobic001G281400 Sobic001G206400--Sobic001G281400 Sobic007G124301 Sobic007G124301 Sobic002G272900--Sobic007G124301 Sobic002G272900--Sobic001G516600 Sobic001G483400 Sobic001G483400 Sobic002G272900--Sobic001G483400 Sobic001G389000 Sobic001G389000 Sobic002G272900--Sobic001G389000 Sobic010G213400 Sobic010G213400 Sobic002G272900--Sobic010G213400 Sobic002G272900--Sobic003G037800 Sobic002G272900--Sobic009G033700 Sobic007G151100 Sobic007G151100 Sobic002G272900--Sobic007G151100 Sobic003G249800 Sobic003G249800 Sobic002G272900--Sobic003G249800 Sobic003G363200 Sobic003G363200 Sobic005G139700--Sobic003G363200 Sobic010G245800 Sobic010G245800 Sobic005G139700--Sobic010G245800 Sobic001G290400 Sobic001G290400 Sobic005G139700--Sobic001G290400 Sobic002G197600 Sobic002G197600 Sobic005G139700--Sobic002G197600 Sobic010G200700 Sobic010G200700 Sobic005G139700--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic005G139700--Sobic003G431000 Sobic001G051800 Sobic001G051800 Sobic005G139700--Sobic001G051800 Sobic001G028000 Sobic001G028000 Sobic005G139700--Sobic001G028000 Sobic001G403600 Sobic001G403600 Sobic005G139700--Sobic001G403600
Octagon: transcription factors


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