Gene annotation
Transcriptome id Sobic.010G210300.1
Synonym Sb10g025700
Functional annotation transmembrane 9 superfamily member, putative, expressed
UniProt C5Z6U6
Pfam PF02990
Panther DB PTHR10766 PTHR10766:SF57
NCBI CDD -
KEGG Orthology K17086; transmembrane 9 superfamily member 2/4
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G10840 : Endomembrane protein 70 protein family
RAP-DB (Rice) LOC_Os06g44140.1 : transmembrane 9 superfamily member, putative, expressed
MaizeGDB (Corn) Zm00025a054644 , Zm00025a047903 , Zm00025a042031 , Zm00025a014550 , Zm00025a031240 , Zm00025a051615
Brachypodium KQK16842
Barley HORVU5Hr1G088680.3 , HORVU5Hr1G088680.11 , HORVU5Hr1G088680.10 , HORVU5Hr1G088680.13 , HORVU5Hr1G088680.12 , HORVU5Hr1G088680.15 , HORVU5Hr1G088680.14 , HORVU5Hr1G088680.16 , HORVU5Hr1G088680.9 , HORVU5Hr1G088680.8 , HORVU5Hr1G088680.7 , HORVU5Hr1G088680.6 , HORVU5Hr1G088680.1
Wheat TraesCS5A02G359800 , TraesCS5A02G359800 , TraesCS5D02G369000 , TraesCS5B02G362100 , TraesCS5B02G362100
Populus -


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cDNA sequences
Sobic.010G210300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G101100 E2F family transcription factor protein, putative, expressed -
2 Sobic.006G083000 CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
3 Sobic.006G018800 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
4 Sobic.003G294100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydropyrimidinase, putative, expressed K01465: URA4, dihydroorotase
5 Sobic.001G476300 homeobox associated leucine zipper, putative, expressed -
6 Sobic.002G085200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.003G326800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
8 Sobic.010G170150 - -
9 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.007G183800 ankyrin repeat-containing protein, putative, expressed -
11 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
12 Sobic.010G080500 SAM dependent carboxyl methyltransferase, putative, expressed -
13 Sobic.006G174500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
14 Sobic.001G307600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
15 Sobic.009G150600 expressed protein -
16 Sobic.006G140100 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
17 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
18 Sobic.006G200000 RNA recognition motif, putative, expressed -
19 Sobic.003G276500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
20 Sobic.001G396200 TENA/THI-4 family protein, putative, expressed -


Gene co-expression network
sample Sobic010G210300 Sobic010G210300 Sobic010G101100 Sobic010G101100 Sobic010G210300--Sobic010G101100 Sobic006G083000 Sobic006G083000 Sobic010G210300--Sobic006G083000 Sobic006G018800 Sobic006G018800 Sobic010G210300--Sobic006G018800 Sobic003G294100 Sobic003G294100 Sobic010G210300--Sobic003G294100 Sobic001G476300 Sobic001G476300 Sobic010G210300--Sobic001G476300 Sobic002G085200 Sobic002G085200 Sobic010G210300--Sobic002G085200 Sobic003G326800 Sobic003G326800 Sobic010G210300--Sobic003G326800 Sobic010G170150 Sobic010G170150 Sobic010G210300--Sobic010G170150 Sobic001G075300 Sobic001G075300 Sobic010G210300--Sobic001G075300 Sobic004G217450 Sobic004G217450 Sobic010G101100--Sobic004G217450 Sobic006G031400 Sobic006G031400 Sobic010G101100--Sobic006G031400 Sobic002G385400 Sobic002G385400 Sobic010G101100--Sobic002G385400 Sobic003G034600 Sobic003G034600 Sobic010G101100--Sobic003G034600 Sobic003G279100 Sobic003G279100 Sobic010G101100--Sobic003G279100 Sobic003G345700 Sobic003G345700 Sobic010G101100--Sobic003G345700 Sobic003G125332 Sobic003G125332 Sobic010G101100--Sobic003G125332 Sobic003G276500 Sobic003G276500 Sobic010G101100--Sobic003G276500 Sobic002G074200 Sobic002G074200 Sobic010G101100--Sobic002G074200 Sobic006G200000 Sobic006G200000 Sobic006G083000--Sobic006G200000 Sobic006G083000--Sobic002G385400 Sobic001G157800 Sobic001G157800 Sobic006G083000--Sobic001G157800 Sobic003G096000 Sobic003G096000 Sobic006G083000--Sobic003G096000 Sobic010G265900 Sobic010G265900 Sobic006G083000--Sobic010G265900 Sobic003G396600 Sobic003G396600 Sobic006G083000--Sobic003G396600 Sobic004G344500 Sobic004G344500 Sobic006G083000--Sobic004G344500 Sobic002G186900 Sobic002G186900 Sobic006G083000--Sobic002G186900 Sobic006G083000--Sobic003G034600 Sobic010G040700 Sobic010G040700 Sobic006G018800--Sobic010G040700 Sobic002G026300 Sobic002G026300 Sobic006G018800--Sobic002G026300 Sobic009G147800 Sobic009G147800 Sobic006G018800--Sobic009G147800 Sobic010G236500 Sobic010G236500 Sobic006G018800--Sobic010G236500 Sobic006G174500 Sobic006G174500 Sobic006G018800--Sobic006G174500 Sobic003G049300 Sobic003G049300 Sobic006G018800--Sobic003G049300 Sobic001G206400 Sobic001G206400 Sobic006G018800--Sobic001G206400 Sobic002G272900 Sobic002G272900 Sobic006G018800--Sobic002G272900 Sobic005G139700 Sobic005G139700 Sobic006G018800--Sobic005G139700 Sobic009G059500 Sobic009G059500 Sobic003G294100--Sobic009G059500 Sobic008G168100 Sobic008G168100 Sobic003G294100--Sobic008G168100 Sobic002G280700 Sobic002G280700 Sobic003G294100--Sobic002G280700 Sobic003G294100--Sobic001G157800 Sobic009G250100 Sobic009G250100 Sobic003G294100--Sobic009G250100 Sobic003G294100--Sobic002G186900 Sobic002G271300 Sobic002G271300 Sobic003G294100--Sobic002G271300 Sobic008G126600 Sobic008G126600 Sobic003G294100--Sobic008G126600 Sobic007G152900 Sobic007G152900 Sobic003G294100--Sobic007G152900 Sobic008G099100 Sobic008G099100 Sobic001G476300--Sobic008G099100 Sobic003G052900 Sobic003G052900 Sobic001G476300--Sobic003G052900 Sobic006G183900 Sobic006G183900 Sobic001G476300--Sobic006G183900 Sobic001G455100 Sobic001G455100 Sobic001G476300--Sobic001G455100 Sobic001G307600 Sobic001G307600 Sobic001G476300--Sobic001G307600 Sobic003G287200 Sobic003G287200 Sobic001G476300--Sobic003G287200 Sobic006G201000 Sobic006G201000 Sobic001G476300--Sobic006G201000 Sobic005G231300 Sobic005G231300 Sobic001G476300--Sobic005G231300 Sobic007G090472 Sobic007G090472 Sobic001G476300--Sobic007G090472 Sobic003G363600 Sobic003G363600 Sobic002G085200--Sobic003G363600 Sobic003G111900 Sobic003G111900 Sobic002G085200--Sobic003G111900 Sobic002G265900 Sobic002G265900 Sobic002G085200--Sobic002G265900 Sobic006G189900 Sobic006G189900 Sobic002G085200--Sobic006G189900 Sobic004G041600 Sobic004G041600 Sobic002G085200--Sobic004G041600 Sobic005G227900 Sobic005G227900 Sobic002G085200--Sobic005G227900 Sobic002G085200--Sobic001G075300 Sobic002G085200--Sobic010G210300 Sobic002G085200--Sobic006G174500 Sobic003G326800--Sobic003G096000 Sobic004G226500 Sobic004G226500 Sobic003G326800--Sobic004G226500 Sobic004G056400 Sobic004G056400 Sobic003G326800--Sobic004G056400 Sobic003G326800--Sobic002G186900 Sobic003G340700 Sobic003G340700 Sobic003G326800--Sobic003G340700 Sobic006G126000 Sobic006G126000 Sobic003G326800--Sobic006G126000 Sobic007G150000 Sobic007G150000 Sobic003G326800--Sobic007G150000 Sobic010G101600 Sobic010G101600 Sobic003G326800--Sobic010G101600 Sobic009G164700 Sobic009G164700 Sobic003G326800--Sobic009G164700 Sobic010G170150--Sobic001G075300 Sobic010G082100 Sobic010G082100 Sobic010G170150--Sobic010G082100 Sobic008G076700 Sobic008G076700 Sobic010G170150--Sobic008G076700 Sobic009G150600 Sobic009G150600 Sobic010G170150--Sobic009G150600 Sobic001G349200 Sobic001G349200 Sobic010G170150--Sobic001G349200 Sobic001G348200 Sobic001G348200 Sobic010G170150--Sobic001G348200 Sobic001G396700 Sobic001G396700 Sobic010G170150--Sobic001G396700 Sobic002G373700 Sobic002G373700 Sobic010G170150--Sobic002G373700 Sobic006G209000 Sobic006G209000 Sobic010G170150--Sobic006G209000 Sobic001G075300--Sobic010G170150 Sobic001G075300--Sobic009G150600 Sobic001G075300--Sobic008G076700 Sobic001G428600 Sobic001G428600 Sobic001G075300--Sobic001G428600 Sobic007G108700 Sobic007G108700 Sobic001G075300--Sobic007G108700 Sobic001G075300--Sobic010G082100 Sobic010G083300 Sobic010G083300 Sobic001G075300--Sobic010G083300 Sobic002G185400 Sobic002G185400 Sobic001G075300--Sobic002G185400 Sobic004G212600 Sobic004G212600 Sobic001G075300--Sobic004G212600
Octagon: transcription factors


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