Gene annotation
Transcriptome id Sobic.001G476300.1
Synonym ATHB-5, HB5, Sb01g044620, ATHB5
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5WUU6
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF300
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G40060 : homeobox protein 16
RAP-DB (Rice) LOC_Os03g08960.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a001023 , Zm00025a053163 , Zm00025a015018 , Zm00025a047342 , Zm00025a048515 , Zm00025a001186 , Zm00025a053225 , Zm00025a014128
Brachypodium KQJ98719 , KQK23207 , KQK01491 , KQK01492 , PNT69475 , KQJ90600 , KQK23405
Barley HORVU4Hr1G075180.3 , HORVU4Hr1G075180.7 , HORVU4Hr1G075180.6 , HORVU4Hr1G075180.5 , HORVU4Hr1G075180.4 , HORVU4Hr1G078410.4 , HORVU4Hr1G078410.5 , HORVU4Hr1G078410.2 , HORVU4Hr1G078410.3 , HORVU6Hr1G072810.4 , HORVU4Hr1G075170.2 , HORVU4Hr1G075170.1 , HORVU5Hr1G070260.1 , HORVU5Hr1G070260.3 , HORVU5Hr1G070260.5 , HORVU6Hr1G072810.6 , HORVU6Hr1G072810.7 , HORVU6Hr1G072810.5 , HORVU6Hr1G072810.2 , HORVU6Hr1G072810.1
Wheat TraesCS6B02G321100 , TraesCS6D02G272000 , TraesCS6D02G272000 , TraesCS4B02G305300 , TraesCS5A02G249000 , TraesCS5D02G256200 , TraesCS4A02G405800 , TraesCS4D02G303500 , TraesCS5B02G246700 , TraesCS6A02G290800
Populus -


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cDNA sequences
Sobic.001G476300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G099100 expressed protein -
2 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
3 Sobic.006G183900 cytochrome P450, putative, expressed -
4 Sobic.001G455100 expressed protein -
5 Sobic.001G307600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
6 Sobic.003G287200 WRKY23, expressed -
7 Sobic.006G201000 WRKY37, expressed -
8 Sobic.005G231300 thaumatin, putative, expressed -
9 Sobic.007G090472 - -
10 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
11 Sobic.007G165400 DNA binding protein, putative, expressed -
12 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
13 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
14 Sobic.001G460400 expressed protein -
15 Sobic.010G180100 transferase family protein, putative, expressed -
16 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
18 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
19 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
20 Sobic.008G135300 thaumatin family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G476300 Sobic001G476300 Sobic008G099100 Sobic008G099100 Sobic001G476300--Sobic008G099100 Sobic003G052900 Sobic003G052900 Sobic001G476300--Sobic003G052900 Sobic006G183900 Sobic006G183900 Sobic001G476300--Sobic006G183900 Sobic001G455100 Sobic001G455100 Sobic001G476300--Sobic001G455100 Sobic001G307600 Sobic001G307600 Sobic001G476300--Sobic001G307600 Sobic003G287200 Sobic003G287200 Sobic001G476300--Sobic003G287200 Sobic006G201000 Sobic006G201000 Sobic001G476300--Sobic006G201000 Sobic005G231300 Sobic005G231300 Sobic001G476300--Sobic005G231300 Sobic007G090472 Sobic007G090472 Sobic001G476300--Sobic007G090472 Sobic001G514300 Sobic001G514300 Sobic008G099100--Sobic001G514300 Sobic008G099100--Sobic001G455100 Sobic008G099100--Sobic005G231300 Sobic007G154200 Sobic007G154200 Sobic008G099100--Sobic007G154200 Sobic008G135300 Sobic008G135300 Sobic008G099100--Sobic008G135300 Sobic003G083600 Sobic003G083600 Sobic008G099100--Sobic003G083600 Sobic008G099100--Sobic006G201000 Sobic010G082000 Sobic010G082000 Sobic008G099100--Sobic010G082000 Sobic003G322100 Sobic003G322100 Sobic008G099100--Sobic003G322100 Sobic004G030300 Sobic004G030300 Sobic003G052900--Sobic004G030300 Sobic001G245800 Sobic001G245800 Sobic003G052900--Sobic001G245800 Sobic003G052900--Sobic001G455100 Sobic003G052900--Sobic008G135300 Sobic002G226500 Sobic002G226500 Sobic003G052900--Sobic002G226500 Sobic003G052900--Sobic008G099100 Sobic001G295800 Sobic001G295800 Sobic003G052900--Sobic001G295800 Sobic003G052900--Sobic005G231300 Sobic003G247600 Sobic003G247600 Sobic003G052900--Sobic003G247600 Sobic006G183900--Sobic003G287200 Sobic007G109600 Sobic007G109600 Sobic006G183900--Sobic007G109600 Sobic006G028400 Sobic006G028400 Sobic006G183900--Sobic006G028400 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic007G170300 Sobic007G170300 Sobic006G183900--Sobic007G170300 Sobic002G365600 Sobic002G365600 Sobic006G183900--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic006G183900--Sobic002G365500 Sobic001G455100--Sobic007G154200 Sobic001G455100--Sobic008G099100 Sobic001G455100--Sobic008G135300 Sobic010G148800 Sobic010G148800 Sobic001G455100--Sobic010G148800 Sobic001G522700 Sobic001G522700 Sobic001G455100--Sobic001G522700 Sobic001G455100--Sobic003G322100 Sobic002G365550 Sobic002G365550 Sobic001G455100--Sobic002G365550 Sobic010G096400 Sobic010G096400 Sobic001G455100--Sobic010G096400 Sobic009G221500 Sobic009G221500 Sobic001G455100--Sobic009G221500 Sobic008G035800 Sobic008G035800 Sobic001G307600--Sobic008G035800 Sobic004G271800 Sobic004G271800 Sobic001G307600--Sobic004G271800 Sobic004G312200 Sobic004G312200 Sobic001G307600--Sobic004G312200 Sobic001G307600--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G307600--Sobic004G322000 Sobic001G307600--Sobic007G090472 Sobic001G232000 Sobic001G232000 Sobic001G307600--Sobic001G232000 Sobic001G307600--Sobic006G201000 Sobic006G092700 Sobic006G092700 Sobic001G307600--Sobic006G092700 Sobic003G287200--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic003G287200--Sobic006G229100 Sobic001G002800 Sobic001G002800 Sobic003G287200--Sobic001G002800 Sobic001G360500 Sobic001G360500 Sobic003G287200--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic010G096700 Sobic010G096700 Sobic003G287200--Sobic010G096700 Sobic003G287200--Sobic007G170300 Sobic006G117500 Sobic006G117500 Sobic003G287200--Sobic006G117500 Sobic006G201000--Sobic004G271800 Sobic003G183300 Sobic003G183300 Sobic006G201000--Sobic003G183300 Sobic006G201000--Sobic008G035800 Sobic006G201000--Sobic010G082000 Sobic006G201000--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic006G201000--Sobic006G135300 Sobic006G201000--Sobic004G322000 Sobic007G090600 Sobic007G090600 Sobic006G201000--Sobic007G090600 Sobic003G240400 Sobic003G240400 Sobic006G201000--Sobic003G240400 Sobic005G231300--Sobic001G514300 Sobic005G231300--Sobic003G083600 Sobic009G079900 Sobic009G079900 Sobic005G231300--Sobic009G079900 Sobic005G231300--Sobic008G099100 Sobic007G208100 Sobic007G208100 Sobic005G231300--Sobic007G208100 Sobic006G030200 Sobic006G030200 Sobic005G231300--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic005G231300--Sobic001G314000 Sobic008G077300 Sobic008G077300 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic010G028100 Sobic010G028100 Sobic007G090472--Sobic010G028100 Sobic007G073000 Sobic007G073000 Sobic007G090472--Sobic007G073000 Sobic007G090472--Sobic001G360500 Sobic007G090472--Sobic010G082000 Sobic007G090472--Sobic006G092700 Sobic007G090472--Sobic006G135300 Sobic007G090472--Sobic006G229100 Sobic007G090472--Sobic001G503000 Sobic003G215300 Sobic003G215300 Sobic007G090472--Sobic003G215300
Octagon: transcription factors


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