Gene annotation
Transcriptome id Sobic.006G078800.2
Synonym
Functional annotation -
UniProt A0A1B6PKW1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G140100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
2 Sobic.003G204100 expressed protein -
3 Sobic.004G185500 extracellular ligand-gated ion channel, putative, expressed -
4 Sobic.007G049900 MYB family transcription factor, putative, expressed -
5 Sobic.010G147500 tryptophan biosynthesis protein trpCF, putative, expressed K01817: phosphoribosylanthranilate isomerase
6 Sobic.008G084401 - -
7 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
8 Sobic.003G368400 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
9 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
10 Sobic.008G065300 - -
11 Sobic.010G197200 peroxiredoxin, putative, expressed -
12 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
13 Sobic.002G138300 expressed protein -
14 Sobic.002G154800 glycosyl transferase, group 1 domain containing protein, expressed -
15 Sobic.009G080600 expressed protein -
16 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.003G194800 EF hand family protein, putative, expressed -
18 Sobic.004G007700 pentatricopeptide, putative, expressed -
19 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -
20 Sobic.003G194300 50S ribosomal protein, putative, expressed K02914: RP-L34, MRPL34, large subunit ribosomal protein L34


Gene co-expression network
sample Sobic006G078800 Sobic006G078800 Sobic007G140100 Sobic007G140100 Sobic006G078800--Sobic007G140100 Sobic003G204100 Sobic003G204100 Sobic006G078800--Sobic003G204100 Sobic004G185500 Sobic004G185500 Sobic006G078800--Sobic004G185500 Sobic007G049900 Sobic007G049900 Sobic006G078800--Sobic007G049900 Sobic010G147500 Sobic010G147500 Sobic006G078800--Sobic010G147500 Sobic008G084401 Sobic008G084401 Sobic006G078800--Sobic008G084401 Sobic001G052100 Sobic001G052100 Sobic006G078800--Sobic001G052100 Sobic003G368400 Sobic003G368400 Sobic006G078800--Sobic003G368400 Sobic003G045000 Sobic003G045000 Sobic006G078800--Sobic003G045000 Sobic010G080900 Sobic010G080900 Sobic007G140100--Sobic010G080900 Sobic010G188900 Sobic010G188900 Sobic007G140100--Sobic010G188900 Sobic008G047500 Sobic008G047500 Sobic007G140100--Sobic008G047500 Sobic010G018900 Sobic010G018900 Sobic007G140100--Sobic010G018900 Sobic007G010200 Sobic007G010200 Sobic007G140100--Sobic007G010200 Sobic001G203600 Sobic001G203600 Sobic007G140100--Sobic001G203600 Sobic004G007700 Sobic004G007700 Sobic007G140100--Sobic004G007700 Sobic001G268300 Sobic001G268300 Sobic007G140100--Sobic001G268300 Sobic006G153200 Sobic006G153200 Sobic007G140100--Sobic006G153200 Sobic003G204100--Sobic008G047500 Sobic003G194800 Sobic003G194800 Sobic003G204100--Sobic003G194800 Sobic003G045450 Sobic003G045450 Sobic003G204100--Sobic003G045450 Sobic004G298600 Sobic004G298600 Sobic003G204100--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic003G204100--Sobic008G085950 Sobic002G173400 Sobic002G173400 Sobic003G204100--Sobic002G173400 Sobic010G143600 Sobic010G143600 Sobic003G204100--Sobic010G143600 Sobic001G117900 Sobic001G117900 Sobic003G204100--Sobic001G117900 Sobic007G102000 Sobic007G102000 Sobic003G204100--Sobic007G102000 Sobic005G170000 Sobic005G170000 Sobic004G185500--Sobic005G170000 Sobic004G185500--Sobic006G078800 Sobic004G185500--Sobic003G368400 Sobic004G043600 Sobic004G043600 Sobic004G185500--Sobic004G043600 Sobic008G112100 Sobic008G112100 Sobic004G185500--Sobic008G112100 Sobic008G090300 Sobic008G090300 Sobic004G185500--Sobic008G090300 Sobic006G066000 Sobic006G066000 Sobic004G185500--Sobic006G066000 Sobic005G216800 Sobic005G216800 Sobic004G185500--Sobic005G216800 Sobic005G123400 Sobic005G123400 Sobic004G185500--Sobic005G123400 Sobic001G453600 Sobic001G453600 Sobic007G049900--Sobic001G453600 Sobic006G162400 Sobic006G162400 Sobic007G049900--Sobic006G162400 Sobic002G414800 Sobic002G414800 Sobic007G049900--Sobic002G414800 Sobic001G387300 Sobic001G387300 Sobic007G049900--Sobic001G387300 Sobic009G218000 Sobic009G218000 Sobic007G049900--Sobic009G218000 Sobic008G011800 Sobic008G011800 Sobic007G049900--Sobic008G011800 Sobic009G046900 Sobic009G046900 Sobic007G049900--Sobic009G046900 Sobic002G239400 Sobic002G239400 Sobic007G049900--Sobic002G239400 Sobic010G225201 Sobic010G225201 Sobic007G049900--Sobic010G225201 Sobic010G147500--Sobic001G117900 Sobic001G529500 Sobic001G529500 Sobic010G147500--Sobic001G529500 Sobic010G147500--Sobic010G188900 Sobic002G308000 Sobic002G308000 Sobic010G147500--Sobic002G308000 Sobic001G440000 Sobic001G440000 Sobic010G147500--Sobic001G440000 Sobic010G147500--Sobic003G204100 Sobic006G095000 Sobic006G095000 Sobic010G147500--Sobic006G095000 Sobic001G248400 Sobic001G248400 Sobic010G147500--Sobic001G248400 Sobic010G147500--Sobic004G298600 Sobic001G361200 Sobic001G361200 Sobic008G084401--Sobic001G361200 Sobic008G084401--Sobic008G090300 Sobic008G084401--Sobic003G045000 Sobic008G084401--Sobic006G066000 Sobic001G242300 Sobic001G242300 Sobic008G084401--Sobic001G242300 Sobic009G122900 Sobic009G122900 Sobic008G084401--Sobic009G122900 Sobic001G533100 Sobic001G533100 Sobic008G084401--Sobic001G533100 Sobic008G084401--Sobic005G216800 Sobic003G397100 Sobic003G397100 Sobic008G084401--Sobic003G397100 Sobic001G052100--Sobic005G123400 Sobic008G039000 Sobic008G039000 Sobic001G052100--Sobic008G039000 Sobic001G052100--Sobic001G203600 Sobic010G112600 Sobic010G112600 Sobic001G052100--Sobic010G112600 Sobic006G237500 Sobic006G237500 Sobic001G052100--Sobic006G237500 Sobic006G262800 Sobic006G262800 Sobic001G052100--Sobic006G262800 Sobic009G227100 Sobic009G227100 Sobic001G052100--Sobic009G227100 Sobic001G478900 Sobic001G478900 Sobic001G052100--Sobic001G478900 Sobic008G095900 Sobic008G095900 Sobic001G052100--Sobic008G095900 Sobic003G368400--Sobic005G123400 Sobic001G385000 Sobic001G385000 Sobic003G368400--Sobic001G385000 Sobic003G368400--Sobic003G194800 Sobic003G368400--Sobic010G112600 Sobic010G086300 Sobic010G086300 Sobic003G368400--Sobic010G086300 Sobic003G402900 Sobic003G402900 Sobic003G368400--Sobic003G402900 Sobic003G190200 Sobic003G190200 Sobic003G368400--Sobic003G190200 Sobic003G393200 Sobic003G393200 Sobic003G368400--Sobic003G393200 Sobic003G394500 Sobic003G394500 Sobic003G368400--Sobic003G394500 Sobic003G045000--Sobic008G085950 Sobic003G045000--Sobic008G047500 Sobic003G045000--Sobic010G188900 Sobic003G045000--Sobic002G308000 Sobic007G043700 Sobic007G043700 Sobic003G045000--Sobic007G043700 Sobic003G045000--Sobic003G194800 Sobic007G105700 Sobic007G105700 Sobic003G045000--Sobic007G105700 Sobic002G390800 Sobic002G390800 Sobic003G045000--Sobic002G390800 Sobic009G120400 Sobic009G120400 Sobic003G045000--Sobic009G120400
Octagon: transcription factors


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