Gene annotation
Transcriptome id Sobic.006G171200.1
Synonym Sb06g024650, ATEXPB2, EXPB2, ATHEXPBETA1.4
Functional annotation expansin B2( (PubMedID : 26759170,(PubMedID : 24597475)
expansin precursor, putative, expressed
UniProt C5YDI0
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os04g46630.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a050515 , Zm00025a050585 , Zm00025a056862
Brachypodium -
Barley HORVU2Hr1G013340.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G044500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.003G250700 fasciclin domain containing protein, expressed -
3 Sobic.002G233500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.007G212900 ZOS8-10 - C2H2 zinc finger protein, expressed -
5 Sobic.004G099100 expressed protein -
6 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
7 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
8 Sobic.010G080800 zinc finger family protein, putative, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
9 Sobic.003G427700 expressed protein -
10 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
11 Sobic.009G198300 expressed protein -
12 Sobic.005G051600 plant protein of unknown function domain containing protein, expressed -
13 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
14 Sobic.005G004700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
16 Sobic.004G170800 serine-aspartate repeat-containing protein I precursor, putative, expressed -
17 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
18 Sobic.005G018900 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
19 Sobic.001G190500 dirigent, putative, expressed -
20 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G171200 Sobic006G171200 Sobic010G044500 Sobic010G044500 Sobic006G171200--Sobic010G044500 Sobic003G250700 Sobic003G250700 Sobic006G171200--Sobic003G250700 Sobic002G233500 Sobic002G233500 Sobic006G171200--Sobic002G233500 Sobic007G212900 Sobic007G212900 Sobic006G171200--Sobic007G212900 Sobic004G099100 Sobic004G099100 Sobic006G171200--Sobic004G099100 Sobic001G107100 Sobic001G107100 Sobic006G171200--Sobic001G107100 Sobic001G505100 Sobic001G505100 Sobic006G171200--Sobic001G505100 Sobic010G080800 Sobic010G080800 Sobic006G171200--Sobic010G080800 Sobic003G427700 Sobic003G427700 Sobic006G171200--Sobic003G427700 Sobic004G293100 Sobic004G293100 Sobic010G044500--Sobic004G293100 Sobic002G007100 Sobic002G007100 Sobic010G044500--Sobic002G007100 Sobic003G015400 Sobic003G015400 Sobic010G044500--Sobic003G015400 Sobic010G044500--Sobic001G107100 Sobic001G202400 Sobic001G202400 Sobic010G044500--Sobic001G202400 Sobic010G044500--Sobic006G171200 Sobic004G298500 Sobic004G298500 Sobic010G044500--Sobic004G298500 Sobic010G044500--Sobic002G233500 Sobic003G181600 Sobic003G181600 Sobic010G044500--Sobic003G181600 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic001G046800 Sobic001G046800 Sobic003G250700--Sobic001G046800 Sobic003G000200 Sobic003G000200 Sobic003G250700--Sobic003G000200 Sobic010G047600 Sobic010G047600 Sobic003G250700--Sobic010G047600 Sobic003G321400 Sobic003G321400 Sobic003G250700--Sobic003G321400 Sobic010G014400 Sobic010G014400 Sobic003G250700--Sobic010G014400 Sobic004G170800 Sobic004G170800 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500 Sobic002G396400 Sobic002G396400 Sobic002G233500--Sobic002G396400 Sobic002G233500--Sobic001G038300 Sobic001G475500 Sobic001G475500 Sobic002G233500--Sobic001G475500 Sobic005G004700 Sobic005G004700 Sobic002G233500--Sobic005G004700 Sobic001G434300 Sobic001G434300 Sobic002G233500--Sobic001G434300 Sobic002G233500--Sobic001G107100 Sobic002G173200 Sobic002G173200 Sobic002G233500--Sobic002G173200 Sobic003G117500 Sobic003G117500 Sobic002G233500--Sobic003G117500 Sobic001G112100 Sobic001G112100 Sobic002G233500--Sobic001G112100 Sobic010G008300 Sobic010G008300 Sobic007G212900--Sobic010G008300 Sobic007G212900--Sobic004G298500 Sobic007G212900--Sobic006G171200 Sobic007G212900--Sobic010G044500 Sobic001G140400 Sobic001G140400 Sobic007G212900--Sobic001G140400 Sobic006G195400 Sobic006G195400 Sobic007G212900--Sobic006G195400 Sobic003G176200 Sobic003G176200 Sobic007G212900--Sobic003G176200 Sobic007G090436 Sobic007G090436 Sobic007G212900--Sobic007G090436 Sobic005G228100 Sobic005G228100 Sobic007G212900--Sobic005G228100 Sobic003G328800 Sobic003G328800 Sobic004G099100--Sobic003G328800 Sobic004G154600 Sobic004G154600 Sobic004G099100--Sobic004G154600 Sobic001G089100 Sobic001G089100 Sobic004G099100--Sobic001G089100 Sobic008G136000 Sobic008G136000 Sobic004G099100--Sobic008G136000 Sobic006G213100 Sobic006G213100 Sobic004G099100--Sobic006G213100 Sobic006G194150 Sobic006G194150 Sobic004G099100--Sobic006G194150 Sobic010G163900 Sobic010G163900 Sobic004G099100--Sobic010G163900 Sobic004G259101 Sobic004G259101 Sobic004G099100--Sobic004G259101 Sobic006G241300 Sobic006G241300 Sobic004G099100--Sobic006G241300 Sobic001G107100--Sobic001G038300 Sobic001G107100--Sobic003G250700 Sobic001G107100--Sobic002G396400 Sobic001G107200 Sobic001G107200 Sobic001G107100--Sobic001G107200 Sobic002G333800 Sobic002G333800 Sobic001G107100--Sobic002G333800 Sobic002G252000 Sobic002G252000 Sobic001G107100--Sobic002G252000 Sobic006G278100 Sobic006G278100 Sobic001G107100--Sobic006G278100 Sobic001G107100--Sobic001G156500 Sobic001G107100--Sobic007G090436 Sobic004G345500 Sobic004G345500 Sobic001G505100--Sobic004G345500 Sobic004G152400 Sobic004G152400 Sobic001G505100--Sobic004G152400 Sobic004G103800 Sobic004G103800 Sobic001G505100--Sobic004G103800 Sobic007G019000 Sobic007G019000 Sobic001G505100--Sobic007G019000 Sobic010G230700 Sobic010G230700 Sobic001G505100--Sobic010G230700 Sobic007G018300 Sobic007G018300 Sobic001G505100--Sobic007G018300 Sobic002G330000 Sobic002G330000 Sobic001G505100--Sobic002G330000 Sobic003G344600 Sobic003G344600 Sobic001G505100--Sobic003G344600 Sobic002G115000 Sobic002G115000 Sobic001G505100--Sobic002G115000 Sobic010G080800--Sobic001G046800 Sobic010G080800--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic010G080800--Sobic001G261460 Sobic002G075600 Sobic002G075600 Sobic010G080800--Sobic002G075600 Sobic003G078900 Sobic003G078900 Sobic010G080800--Sobic003G078900 Sobic002G053900 Sobic002G053900 Sobic010G080800--Sobic002G053900 Sobic003G269100 Sobic003G269100 Sobic010G080800--Sobic003G269100 Sobic010G080800--Sobic003G321400 Sobic001G245800 Sobic001G245800 Sobic010G080800--Sobic001G245800 Sobic005G142500 Sobic005G142500 Sobic003G427700--Sobic005G142500 Sobic003G427700--Sobic005G004700 Sobic005G051600 Sobic005G051600 Sobic003G427700--Sobic005G051600 Sobic001G470100 Sobic001G470100 Sobic003G427700--Sobic001G470100 Sobic001G264300 Sobic001G264300 Sobic003G427700--Sobic001G264300 Sobic007G213400 Sobic007G213400 Sobic003G427700--Sobic007G213400 Sobic003G427700--Sobic001G038300 Sobic002G247800 Sobic002G247800 Sobic003G427700--Sobic002G247800 Sobic010G159100 Sobic010G159100 Sobic003G427700--Sobic010G159100
Octagon: transcription factors


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