Gene annotation
Transcriptome id Sobic.007G212900.1
Synonym Sb07g028010, WIP2, NTT
Functional annotation ZOS8-10 - C2H2 zinc finger protein, expressed
UniProt C5YJ42
Pfam -
Panther DB PTHR10593:SF41 PTHR10593
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20880 : WIP domain protein 4
RAP-DB (Rice) LOC_Os08g39390.1 : ZOS8-10 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a037244 , Zm00025a046409 , Zm00025a033793 , Zm00025a051571 , Zm00025a043815 , Zm00025a026771 , Zm00025a013702 , Zm00025a047434 , Zm00025a005046 , Zm00025a042128
Brachypodium KQK10684 , KQK17682 , KQJ89685 , KQK06003 , KQJ90731 , KQJ89791 , KQJ98896
Barley -
Wheat TraesCS5A02G179800 , TraesCS1A02G276800 , TraesCS5B02G177600 , TraesCS7B02G304000 , TraesCS7D02G242600 , TraesCS5D02G179700 , TraesCS3D02G364800 , TraesCS3B02G404000 , TraesCS5A02G263200 , TraesCS1D02G276200 , TraesCS5D02G270700 , TraesCS5D02G184400 , TraesCS5A02G175400 , TraesCS3A02G371700 , TraesCS7A02G404400 , TraesCS5B02G262400 , TraesCS7D02G397800 , TraesCS1B02G285900 , TraesCS7B02G147400
Populus PNT52212


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G008300 B3 DNA binding domain containing protein, expressed -
2 Sobic.004G298500 cyclin, putative, expressed -
3 Sobic.006G171200 expansin B2("PubMedID : 26759170,PubMedID : 24597475")@expansin precursor, putative, expressed -
4 Sobic.010G044500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.001G140400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
6 Sobic.006G195400 expressed protein -
7 Sobic.003G176200 - -
8 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.005G228100 expressed protein -
10 Sobic.003G082900 transferase family protein, putative, expressed -
11 Sobic.006G252466 - K14488: SAUR family protein
12 Sobic.008G173000 transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
13 Sobic.008G064601 - -
14 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
15 Sobic.001G505100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
16 Sobic.008G036900 MYB family transcription factor, putative, expressed -
17 Sobic.006G158000 expressed protein -
18 Sobic.010G003700 scarecrow, putative, expressed -
19 Sobic.002G028500 app1, putative, expressed -
20 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -


Gene co-expression network
sample Sobic007G212900 Sobic007G212900 Sobic010G008300 Sobic010G008300 Sobic007G212900--Sobic010G008300 Sobic004G298500 Sobic004G298500 Sobic007G212900--Sobic004G298500 Sobic006G171200 Sobic006G171200 Sobic007G212900--Sobic006G171200 Sobic010G044500 Sobic010G044500 Sobic007G212900--Sobic010G044500 Sobic001G140400 Sobic001G140400 Sobic007G212900--Sobic001G140400 Sobic006G195400 Sobic006G195400 Sobic007G212900--Sobic006G195400 Sobic003G176200 Sobic003G176200 Sobic007G212900--Sobic003G176200 Sobic007G090436 Sobic007G090436 Sobic007G212900--Sobic007G090436 Sobic005G228100 Sobic005G228100 Sobic007G212900--Sobic005G228100 Sobic009G178550 Sobic009G178550 Sobic010G008300--Sobic009G178550 Sobic005G203700 Sobic005G203700 Sobic010G008300--Sobic005G203700 Sobic009G197100 Sobic009G197100 Sobic010G008300--Sobic009G197100 Sobic010G008300--Sobic007G212900 Sobic001G539300 Sobic001G539300 Sobic010G008300--Sobic001G539300 Sobic004G298500--Sobic007G090436 Sobic001G069800 Sobic001G069800 Sobic004G298500--Sobic001G069800 Sobic004G298500--Sobic001G140400 Sobic003G151300 Sobic003G151300 Sobic004G298500--Sobic003G151300 Sobic007G147800 Sobic007G147800 Sobic004G298500--Sobic007G147800 Sobic010G003700 Sobic010G003700 Sobic004G298500--Sobic010G003700 Sobic003G250700 Sobic003G250700 Sobic004G298500--Sobic003G250700 Sobic002G226300 Sobic002G226300 Sobic004G298500--Sobic002G226300 Sobic001G131100 Sobic001G131100 Sobic004G298500--Sobic001G131100 Sobic006G171200--Sobic010G044500 Sobic006G171200--Sobic003G250700 Sobic002G233500 Sobic002G233500 Sobic006G171200--Sobic002G233500 Sobic006G171200--Sobic007G212900 Sobic004G099100 Sobic004G099100 Sobic006G171200--Sobic004G099100 Sobic001G107100 Sobic001G107100 Sobic006G171200--Sobic001G107100 Sobic001G505100 Sobic001G505100 Sobic006G171200--Sobic001G505100 Sobic010G080800 Sobic010G080800 Sobic006G171200--Sobic010G080800 Sobic003G427700 Sobic003G427700 Sobic006G171200--Sobic003G427700 Sobic004G293100 Sobic004G293100 Sobic010G044500--Sobic004G293100 Sobic002G007100 Sobic002G007100 Sobic010G044500--Sobic002G007100 Sobic003G015400 Sobic003G015400 Sobic010G044500--Sobic003G015400 Sobic010G044500--Sobic001G107100 Sobic001G202400 Sobic001G202400 Sobic010G044500--Sobic001G202400 Sobic010G044500--Sobic006G171200 Sobic010G044500--Sobic004G298500 Sobic010G044500--Sobic002G233500 Sobic003G181600 Sobic003G181600 Sobic010G044500--Sobic003G181600 Sobic001G140800 Sobic001G140800 Sobic001G140400--Sobic001G140800 Sobic005G130600 Sobic005G130600 Sobic001G140400--Sobic005G130600 Sobic005G087400 Sobic005G087400 Sobic001G140400--Sobic005G087400 Sobic001G144800 Sobic001G144800 Sobic001G140400--Sobic001G144800 Sobic005G145100 Sobic005G145100 Sobic001G140400--Sobic005G145100 Sobic001G388000 Sobic001G388000 Sobic001G140400--Sobic001G388000 Sobic001G140400--Sobic004G298500 Sobic001G484000 Sobic001G484000 Sobic001G140400--Sobic001G484000 Sobic010G133932 Sobic010G133932 Sobic001G140400--Sobic010G133932 Sobic009G207100 Sobic009G207100 Sobic006G195400--Sobic009G207100 Sobic001G215500 Sobic001G215500 Sobic006G195400--Sobic001G215500 Sobic003G383800 Sobic003G383800 Sobic006G195400--Sobic003G383800 Sobic002G370000 Sobic002G370000 Sobic006G195400--Sobic002G370000 Sobic009G055900 Sobic009G055900 Sobic006G195400--Sobic009G055900 Sobic005G080050 Sobic005G080050 Sobic006G195400--Sobic005G080050 Sobic002G064400 Sobic002G064400 Sobic006G195400--Sobic002G064400 Sobic006G249100 Sobic006G249100 Sobic006G195400--Sobic006G249100 Sobic006G195400--Sobic005G228100 Sobic008G130700 Sobic008G130700 Sobic003G176200--Sobic008G130700 Sobic007G123200 Sobic007G123200 Sobic003G176200--Sobic007G123200 Sobic001G275800 Sobic001G275800 Sobic003G176200--Sobic001G275800 Sobic007G090415 Sobic007G090415 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic008G008500 Sobic008G008500 Sobic003G176200--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic003G176200--Sobic004G151900 Sobic003G206700 Sobic003G206700 Sobic007G090436--Sobic003G206700 Sobic007G090436--Sobic003G250700 Sobic007G090436--Sobic001G107100 Sobic007G090436--Sobic007G147800 Sobic002G338400 Sobic002G338400 Sobic007G090436--Sobic002G338400 Sobic010G014400 Sobic010G014400 Sobic007G090436--Sobic010G014400 Sobic007G090436--Sobic001G144800 Sobic002G244300 Sobic002G244300 Sobic007G090436--Sobic002G244300 Sobic001G046800 Sobic001G046800 Sobic007G090436--Sobic001G046800 Sobic005G228100--Sobic002G370000 Sobic004G253800 Sobic004G253800 Sobic005G228100--Sobic004G253800 Sobic008G072300 Sobic008G072300 Sobic005G228100--Sobic008G072300 Sobic006G204100 Sobic006G204100 Sobic005G228100--Sobic006G204100 Sobic006G114300 Sobic006G114300 Sobic005G228100--Sobic006G114300 Sobic002G242600 Sobic002G242600 Sobic005G228100--Sobic002G242600 Sobic002G190800 Sobic002G190800 Sobic005G228100--Sobic002G190800 Sobic004G044000 Sobic004G044000 Sobic005G228100--Sobic004G044000 Sobic001G172300 Sobic001G172300 Sobic005G228100--Sobic001G172300
Octagon: transcription factors


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