Gene annotation
Transcriptome id Sobic.001G140400.1
Synonym Sb01g012220, SbEPFL3, epidermal patterning factor/EPF-like
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt C5WPQ7
Pfam -
Panther DB PTHR33109 PTHR33109:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37810 : -
RAP-DB (Rice) LOC_Os03g46930.1 : expressed protein
MaizeGDB (Corn) Zm00025a017128
Brachypodium KQK13827
Barley HORVU2Hr1G061260.9 , HORVU2Hr1G061260.8 , HORVU2Hr1G061260.1 , HORVU2Hr1G061260.3 , HORVU2Hr1G061260.2 , HORVU2Hr1G061260.5 , HORVU2Hr1G061260.4 , HORVU2Hr1G061260.7 , HORVU2Hr1G061260.6 , HORVU2Hr1G061260.11 , HORVU2Hr1G061260.10 , HORVU4Hr1G003230.4 , HORVU4Hr1G003230.5 , HORVU4Hr1G003230.6 , HORVU4Hr1G003230.1 , HORVU4Hr1G003230.2 , HORVU4Hr1G003230.3
Wheat TraesCS2D02G256100 , TraesCS4B02G021700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
2 Sobic.005G130600 expressed protein -
3 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
4 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G145100 phospholipase A2, putative, expressed -
6 Sobic.001G388000 GTPase-activating protein, putative, expressed -
7 Sobic.004G298500 cyclin, putative, expressed -
8 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.010G133932 - -
10 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
11 Sobic.002G028500 app1, putative, expressed -
12 Sobic.001G129600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
13 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase
14 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
16 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
17 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.003G250700 fasciclin domain containing protein, expressed -
19 Sobic.010G014400 - -
20 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G140400 Sobic001G140400 Sobic001G140800 Sobic001G140800 Sobic001G140400--Sobic001G140800 Sobic005G130600 Sobic005G130600 Sobic001G140400--Sobic005G130600 Sobic005G087400 Sobic005G087400 Sobic001G140400--Sobic005G087400 Sobic001G144800 Sobic001G144800 Sobic001G140400--Sobic001G144800 Sobic005G145100 Sobic005G145100 Sobic001G140400--Sobic005G145100 Sobic001G388000 Sobic001G388000 Sobic001G140400--Sobic001G388000 Sobic004G298500 Sobic004G298500 Sobic001G140400--Sobic004G298500 Sobic001G484000 Sobic001G484000 Sobic001G140400--Sobic001G484000 Sobic010G133932 Sobic010G133932 Sobic001G140400--Sobic010G133932 Sobic005G110600 Sobic005G110600 Sobic001G140800--Sobic005G110600 Sobic001G140800--Sobic001G388000 Sobic001G140800--Sobic005G145100 Sobic001G140800--Sobic010G133932 Sobic001G140800--Sobic005G087400 Sobic001G129600 Sobic001G129600 Sobic001G140800--Sobic001G129600 Sobic005G130700 Sobic005G130700 Sobic001G140800--Sobic005G130700 Sobic001G140800--Sobic001G484000 Sobic006G062300 Sobic006G062300 Sobic001G140800--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G130600--Sobic004G297950 Sobic003G321400 Sobic003G321400 Sobic005G130600--Sobic003G321400 Sobic003G269100 Sobic003G269100 Sobic005G130600--Sobic003G269100 Sobic005G130600--Sobic005G110600 Sobic005G130600--Sobic001G140800 Sobic003G115200 Sobic003G115200 Sobic005G130600--Sobic003G115200 Sobic006G096500 Sobic006G096500 Sobic005G130600--Sobic006G096500 Sobic001G046800 Sobic001G046800 Sobic005G130600--Sobic001G046800 Sobic001G099600 Sobic001G099600 Sobic005G130600--Sobic001G099600 Sobic005G087400--Sobic001G140800 Sobic004G150800 Sobic004G150800 Sobic005G087400--Sobic004G150800 Sobic005G087400--Sobic006G096500 Sobic005G087400--Sobic001G388000 Sobic005G087400--Sobic001G129600 Sobic003G272900 Sobic003G272900 Sobic005G087400--Sobic003G272900 Sobic005G087400--Sobic005G145100 Sobic005G087400--Sobic005G110600 Sobic003G006100 Sobic003G006100 Sobic005G087400--Sobic003G006100 Sobic003G341500 Sobic003G341500 Sobic001G144800--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic001G144800--Sobic004G266700 Sobic003G206700 Sobic003G206700 Sobic001G144800--Sobic003G206700 Sobic001G059500 Sobic001G059500 Sobic001G144800--Sobic001G059500 Sobic001G068500 Sobic001G068500 Sobic001G144800--Sobic001G068500 Sobic003G368100 Sobic003G368100 Sobic001G144800--Sobic003G368100 Sobic009G008800 Sobic009G008800 Sobic001G144800--Sobic009G008800 Sobic001G059600 Sobic001G059600 Sobic001G144800--Sobic001G059600 Sobic005G127200 Sobic005G127200 Sobic001G144800--Sobic005G127200 Sobic002G028500 Sobic002G028500 Sobic005G145100--Sobic002G028500 Sobic001G208600 Sobic001G208600 Sobic005G145100--Sobic001G208600 Sobic003G239100 Sobic003G239100 Sobic005G145100--Sobic003G239100 Sobic004G290300 Sobic004G290300 Sobic005G145100--Sobic004G290300 Sobic005G145100--Sobic001G129600 Sobic005G145100--Sobic004G266700 Sobic005G145100--Sobic001G140800 Sobic005G145100--Sobic001G388000 Sobic005G145100--Sobic001G144800 Sobic001G388000--Sobic010G133932 Sobic001G388000--Sobic001G140800 Sobic001G388000--Sobic005G145100 Sobic005G112000 Sobic005G112000 Sobic001G388000--Sobic005G112000 Sobic003G366300 Sobic003G366300 Sobic001G388000--Sobic003G366300 Sobic001G388000--Sobic005G110600 Sobic001G388000--Sobic004G290300 Sobic001G388000--Sobic003G239100 Sobic001G388000--Sobic001G484000 Sobic007G090436 Sobic007G090436 Sobic004G298500--Sobic007G090436 Sobic001G069800 Sobic001G069800 Sobic004G298500--Sobic001G069800 Sobic004G298500--Sobic001G140400 Sobic003G151300 Sobic003G151300 Sobic004G298500--Sobic003G151300 Sobic007G147800 Sobic007G147800 Sobic004G298500--Sobic007G147800 Sobic010G003700 Sobic010G003700 Sobic004G298500--Sobic010G003700 Sobic003G250700 Sobic003G250700 Sobic004G298500--Sobic003G250700 Sobic002G226300 Sobic002G226300 Sobic004G298500--Sobic002G226300 Sobic001G131100 Sobic001G131100 Sobic004G298500--Sobic001G131100 Sobic005G052500 Sobic005G052500 Sobic001G484000--Sobic005G052500 Sobic001G484000--Sobic001G046800 Sobic003G352700 Sobic003G352700 Sobic001G484000--Sobic003G352700 Sobic002G053900 Sobic002G053900 Sobic001G484000--Sobic002G053900 Sobic001G484000--Sobic003G269100 Sobic003G082700 Sobic003G082700 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic001G484000--Sobic009G008800 Sobic001G484000--Sobic003G239100 Sobic010G133932--Sobic001G388000 Sobic010G133932--Sobic001G140800 Sobic010G133932--Sobic005G110600 Sobic010G133932--Sobic005G112000 Sobic010G133932--Sobic005G145100 Sobic010G133932--Sobic003G239100 Sobic010G133932--Sobic004G266700 Sobic010G133932--Sobic001G484000 Sobic010G133932--Sobic003G082700
Octagon: transcription factors


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