Gene annotation
Transcriptome id Sobic.006G171400.1
Synonym 1, Sb06g024670, cycp3
Functional annotation cyclin, putative, expressed
UniProt C5YDI2
Pfam PF08613
Panther DB PTHR15615 PTHR15615:SF15
NCBI CDD KOG1674; Cyclin
KEGG Orthology -
Gene Ontology GO:0000079; regulation of cyclin-dependent protein serine/threonine kinase activity


Orthologs (automatic annotation)
TAIR AT2G45080 : cyclin p3;1
RAP-DB (Rice) LOC_Os04g46660.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a010301
Brachypodium KQJ83953
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G111000 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
2 Sobic.006G000400 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
3 Sobic.003G418766 - -
4 Sobic.003G043700 expressed protein -
5 Sobic.002G420200 proline-rich protein, putative, expressed -
6 Sobic.002G361800 expressed protein -
7 Sobic.010G252401 - K14488: SAUR family protein
8 Sobic.003G011600 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
9 Sobic.004G243500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.006G134001 - -
11 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
12 Sobic.010G115200 ribosomal protein L7Ae, putative, expressed K11129: NHP2, H/ACA ribonucleoprotein complex subunit 2
13 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
14 Sobic.006G083000 CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
15 Sobic.004G258900 - -
16 Sobic.003G121500 expressed protein -
17 Sobic.008G106700 isoflavone reductase, putative, expressed -
18 Sobic.003G232400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
20 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -


Gene co-expression network
sample Sobic006G171400 Sobic006G171400 Sobic001G111000 Sobic001G111000 Sobic006G171400--Sobic001G111000 Sobic006G000400 Sobic006G000400 Sobic006G171400--Sobic006G000400 Sobic003G418766 Sobic003G418766 Sobic006G171400--Sobic003G418766 Sobic003G043700 Sobic003G043700 Sobic006G171400--Sobic003G043700 Sobic002G420200 Sobic002G420200 Sobic006G171400--Sobic002G420200 Sobic002G361800 Sobic002G361800 Sobic006G171400--Sobic002G361800 Sobic010G252401 Sobic010G252401 Sobic006G171400--Sobic010G252401 Sobic003G011600 Sobic003G011600 Sobic006G171400--Sobic003G011600 Sobic004G243500 Sobic004G243500 Sobic006G171400--Sobic004G243500 Sobic006G057200 Sobic006G057200 Sobic001G111000--Sobic006G057200 Sobic003G016100 Sobic003G016100 Sobic001G111000--Sobic003G016100 Sobic004G042000 Sobic004G042000 Sobic001G111000--Sobic004G042000 Sobic001G361600 Sobic001G361600 Sobic001G111000--Sobic001G361600 Sobic003G219800 Sobic003G219800 Sobic001G111000--Sobic003G219800 Sobic005G142300 Sobic005G142300 Sobic001G111000--Sobic005G142300 Sobic003G264600 Sobic003G264600 Sobic001G111000--Sobic003G264600 Sobic003G160700 Sobic003G160700 Sobic001G111000--Sobic003G160700 Sobic003G078200 Sobic003G078200 Sobic001G111000--Sobic003G078200 Sobic003G121500 Sobic003G121500 Sobic006G000400--Sobic003G121500 Sobic004G025200 Sobic004G025200 Sobic006G000400--Sobic004G025200 Sobic006G134001 Sobic006G134001 Sobic006G000400--Sobic006G134001 Sobic006G000400--Sobic006G171400 Sobic006G000400--Sobic003G043700 Sobic008G113800 Sobic008G113800 Sobic006G000400--Sobic008G113800 Sobic006G000400--Sobic002G420200 Sobic009G165300 Sobic009G165300 Sobic006G000400--Sobic009G165300 Sobic006G266300 Sobic006G266300 Sobic006G000400--Sobic006G266300 Sobic001G014000 Sobic001G014000 Sobic003G418766--Sobic001G014000 Sobic003G062600 Sobic003G062600 Sobic003G418766--Sobic003G062600 Sobic007G184600 Sobic007G184600 Sobic003G418766--Sobic007G184600 Sobic002G366600 Sobic002G366600 Sobic003G418766--Sobic002G366600 Sobic004G046200 Sobic004G046200 Sobic003G418766--Sobic004G046200 Sobic009G105700 Sobic009G105700 Sobic003G418766--Sobic009G105700 Sobic003G417800 Sobic003G417800 Sobic003G418766--Sobic003G417800 Sobic003G255200 Sobic003G255200 Sobic003G418766--Sobic003G255200 Sobic008G106700 Sobic008G106700 Sobic003G418766--Sobic008G106700 Sobic001G161601 Sobic001G161601 Sobic003G043700--Sobic001G161601 Sobic003G043700--Sobic004G042000 Sobic002G213600 Sobic002G213600 Sobic003G043700--Sobic002G213600 Sobic003G043700--Sobic001G111000 Sobic003G043700--Sobic003G016100 Sobic001G161500 Sobic001G161500 Sobic003G043700--Sobic001G161500 Sobic003G043700--Sobic003G219800 Sobic009G035300 Sobic009G035300 Sobic003G043700--Sobic009G035300 Sobic003G316000 Sobic003G316000 Sobic003G043700--Sobic003G316000 Sobic002G420200--Sobic009G165300 Sobic002G420200--Sobic006G134001 Sobic010G260600 Sobic010G260600 Sobic002G420200--Sobic010G260600 Sobic002G420200--Sobic004G025200 Sobic005G016600 Sobic005G016600 Sobic002G420200--Sobic005G016600 Sobic001G038400 Sobic001G038400 Sobic002G420200--Sobic001G038400 Sobic002G420200--Sobic003G043700 Sobic002G420200--Sobic003G121500 Sobic003G152200 Sobic003G152200 Sobic002G420200--Sobic003G152200 Sobic005G045600 Sobic005G045600 Sobic002G361800--Sobic005G045600 Sobic002G042200 Sobic002G042200 Sobic002G361800--Sobic002G042200 Sobic007G030501 Sobic007G030501 Sobic002G361800--Sobic007G030501 Sobic002G216100 Sobic002G216100 Sobic002G361800--Sobic002G216100 Sobic005G107800 Sobic005G107800 Sobic002G361800--Sobic005G107800 Sobic003G368600 Sobic003G368600 Sobic002G361800--Sobic003G368600 Sobic004G258900 Sobic004G258900 Sobic002G361800--Sobic004G258900 Sobic009G154700 Sobic009G154700 Sobic002G361800--Sobic009G154700 Sobic009G009200 Sobic009G009200 Sobic002G361800--Sobic009G009200 Sobic004G310200 Sobic004G310200 Sobic010G252401--Sobic004G310200 Sobic002G003800 Sobic002G003800 Sobic010G252401--Sobic002G003800 Sobic009G181800 Sobic009G181800 Sobic010G252401--Sobic009G181800 Sobic010G252401--Sobic004G042000 Sobic003G319500 Sobic003G319500 Sobic010G252401--Sobic003G319500 Sobic001G500000 Sobic001G500000 Sobic010G252401--Sobic001G500000 Sobic010G252401--Sobic004G046200 Sobic010G184800 Sobic010G184800 Sobic010G252401--Sobic010G184800 Sobic001G139100 Sobic001G139100 Sobic010G252401--Sobic001G139100 Sobic004G348400 Sobic004G348400 Sobic003G011600--Sobic004G348400 Sobic003G011600--Sobic003G368600 Sobic006G044100 Sobic006G044100 Sobic003G011600--Sobic006G044100 Sobic001G082600 Sobic001G082600 Sobic003G011600--Sobic001G082600 Sobic004G176600 Sobic004G176600 Sobic003G011600--Sobic004G176600 Sobic003G011600--Sobic004G046200 Sobic003G079400 Sobic003G079400 Sobic003G011600--Sobic003G079400 Sobic006G197100 Sobic006G197100 Sobic003G011600--Sobic006G197100 Sobic003G255500 Sobic003G255500 Sobic003G011600--Sobic003G255500 Sobic004G243500--Sobic004G025200 Sobic004G243500--Sobic002G420200 Sobic004G243500--Sobic006G171400 Sobic004G243500--Sobic010G260600 Sobic004G243500--Sobic001G038400 Sobic005G116300 Sobic005G116300 Sobic004G243500--Sobic005G116300 Sobic004G300701 Sobic004G300701 Sobic004G243500--Sobic004G300701 Sobic008G037200 Sobic008G037200 Sobic004G243500--Sobic008G037200 Sobic004G243500--Sobic005G016600
Octagon: transcription factors


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