Gene annotation
Transcriptome id Sobic.006G186100.1
Synonym ATGT18, GT18, Sb06g026010
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
exostosin family domain containing protein, expressed
UniProt C5YE59
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF52
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62220 : glycosyltransferase 18
RAP-DB (Rice) LOC_Os06g23420.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010137 , Zm00025a056744
Brachypodium KQJ84137 , KQJ84149 , PNT67498
Barley HORVU2Hr1G094620.5 , HORVU2Hr1G094620.4 , HORVU2Hr1G094620.7 , HORVU2Hr1G094620.6 , HORVU2Hr1G094620.1 , HORVU2Hr1G094620.3 , HORVU2Hr1G094620.8 , HORVU2Hr1G094540.1 , HORVU2Hr1G094540.2 , HORVU2Hr1G094540.3
Wheat TraesCS2B02G416600 , TraesCS2D02G396200 , TraesCS2A02G398700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G430000 basic helix-loop-helix, putative, expressed -
2 Sobic.008G037200 expressed protein -
3 Sobic.003G023666 - -
4 Sobic.002G359800 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.003G184500 carboxyl-terminal peptidase, putative, expressed -
6 Sobic.002G184800 expressed protein -
7 Sobic.001G403200 receptor-like kinase RHG1, putative, expressed -
8 Sobic.001G038400 expressed protein -
9 Sobic.010G036200 expressed protein -
10 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.006G009500 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS4-01 - C2H2 zinc finger protein, expressed -
12 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
13 Sobic.001G533200 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
15 Sobic.007G224800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G020500 ternary complex factor MIP1, putative, expressed -
18 Sobic.001G300700 expansin precursor, putative, expressed -
19 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
20 Sobic.008G127200 expressed protein -


Gene co-expression network
sample Sobic006G186100 Sobic006G186100 Sobic001G430000 Sobic001G430000 Sobic006G186100--Sobic001G430000 Sobic008G037200 Sobic008G037200 Sobic006G186100--Sobic008G037200 Sobic003G023666 Sobic003G023666 Sobic006G186100--Sobic003G023666 Sobic002G359800 Sobic002G359800 Sobic006G186100--Sobic002G359800 Sobic003G184500 Sobic003G184500 Sobic006G186100--Sobic003G184500 Sobic002G184800 Sobic002G184800 Sobic006G186100--Sobic002G184800 Sobic001G403200 Sobic001G403200 Sobic006G186100--Sobic001G403200 Sobic001G038400 Sobic001G038400 Sobic006G186100--Sobic001G038400 Sobic010G036200 Sobic010G036200 Sobic006G186100--Sobic010G036200 Sobic007G224800 Sobic007G224800 Sobic001G430000--Sobic007G224800 Sobic001G430000--Sobic002G359800 Sobic001G430000--Sobic010G036200 Sobic001G430000--Sobic002G184800 Sobic001G430000--Sobic003G184500 Sobic001G430000--Sobic008G037200 Sobic003G201300 Sobic003G201300 Sobic001G430000--Sobic003G201300 Sobic001G430000--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic001G430000--Sobic008G127200 Sobic008G037200--Sobic001G038400 Sobic008G037200--Sobic001G430000 Sobic004G025200 Sobic004G025200 Sobic008G037200--Sobic004G025200 Sobic008G037200--Sobic007G224800 Sobic008G037200--Sobic003G023666 Sobic001G413700 Sobic001G413700 Sobic008G037200--Sobic001G413700 Sobic008G037200--Sobic010G036200 Sobic008G037200--Sobic002G359800 Sobic008G037200--Sobic003G184500 Sobic003G023666--Sobic001G430000 Sobic003G023666--Sobic008G037200 Sobic004G049800 Sobic004G049800 Sobic003G023666--Sobic004G049800 Sobic003G023666--Sobic003G184500 Sobic003G023666--Sobic007G224800 Sobic001G511200 Sobic001G511200 Sobic003G023666--Sobic001G511200 Sobic004G077100 Sobic004G077100 Sobic003G023666--Sobic004G077100 Sobic006G069500 Sobic006G069500 Sobic003G023666--Sobic006G069500 Sobic003G273800 Sobic003G273800 Sobic003G023666--Sobic003G273800 Sobic002G359800--Sobic002G184800 Sobic002G359800--Sobic001G430000 Sobic002G359800--Sobic001G038400 Sobic002G359800--Sobic003G184500 Sobic010G260600 Sobic010G260600 Sobic002G359800--Sobic010G260600 Sobic004G129700 Sobic004G129700 Sobic002G359800--Sobic004G129700 Sobic002G359800--Sobic010G036200 Sobic009G165300 Sobic009G165300 Sobic002G359800--Sobic009G165300 Sobic002G359800--Sobic008G037200 Sobic003G184500--Sobic001G430000 Sobic001G399400 Sobic001G399400 Sobic003G184500--Sobic001G399400 Sobic008G107600 Sobic008G107600 Sobic003G184500--Sobic008G107600 Sobic006G271100 Sobic006G271100 Sobic003G184500--Sobic006G271100 Sobic003G184500--Sobic002G359800 Sobic003G184500--Sobic002G184800 Sobic003G399400 Sobic003G399400 Sobic003G184500--Sobic003G399400 Sobic002G219500 Sobic002G219500 Sobic003G184500--Sobic002G219500 Sobic003G184500--Sobic003G023666 Sobic002G184800--Sobic002G359800 Sobic002G184800--Sobic001G038400 Sobic002G184800--Sobic001G430000 Sobic002G184800--Sobic010G260600 Sobic002G184800--Sobic003G184500 Sobic002G184800--Sobic009G165300 Sobic002G184800--Sobic001G403200 Sobic002G184800--Sobic004G129700 Sobic002G184800--Sobic010G036200 Sobic002G020500 Sobic002G020500 Sobic001G403200--Sobic002G020500 Sobic004G271500 Sobic004G271500 Sobic001G403200--Sobic004G271500 Sobic003G041700 Sobic003G041700 Sobic001G403200--Sobic003G041700 Sobic010G104400 Sobic010G104400 Sobic001G403200--Sobic010G104400 Sobic008G113800 Sobic008G113800 Sobic001G403200--Sobic008G113800 Sobic003G151900 Sobic003G151900 Sobic001G403200--Sobic003G151900 Sobic001G314000 Sobic001G314000 Sobic001G403200--Sobic001G314000 Sobic001G403200--Sobic001G038400 Sobic006G009500 Sobic006G009500 Sobic001G403200--Sobic006G009500 Sobic001G038400--Sobic010G260600 Sobic001G038400--Sobic002G184800 Sobic001G038400--Sobic002G359800 Sobic001G038400--Sobic008G037200 Sobic001G038400--Sobic009G165300 Sobic001G038400--Sobic001G430000 Sobic001G038400--Sobic001G413700 Sobic005G116300 Sobic005G116300 Sobic001G038400--Sobic005G116300 Sobic001G038400--Sobic004G025200 Sobic010G036200--Sobic007G224800 Sobic010G036200--Sobic001G430000 Sobic008G078600 Sobic008G078600 Sobic010G036200--Sobic008G078600 Sobic010G036200--Sobic003G201300 Sobic010G036200--Sobic001G038400 Sobic010G036200--Sobic002G359800 Sobic009G116766 Sobic009G116766 Sobic010G036200--Sobic009G116766 Sobic010G036200--Sobic008G037200 Sobic010G036200--Sobic008G127200
Octagon: transcription factors


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