Gene annotation
| Transcriptome id | Sobic.006G198800.1 |
|---|---|
| Synonym | MLP423, Sb06g027090, |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) Up-reguralion under drought (PubMedID : 24916767) pathogenesis-related Bet v I family protein, putative, expressed |
| UniProt | C5YF15 |
| Pfam | PF00407 |
| Panther DB | PTHR31213 PTHR31213:SF23 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0009607; response to biotic stimulus GO:0006952defense response |
Orthologs (automatic annotation)
| TAIR | AT1G24020 : MLP-like protein 423 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g50700.1 : pathogenesis-related Bet v I family protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.006G198800 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G074200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- | - |
| 2 | Sobic.002G393600 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 3 | Sobic.002G294000 | purine permease, putative, expressed | - |
| 4 | Sobic.003G146400 | anther-specific protein SF18 precursor, putative, expressed | - |
| 5 | Sobic.005G086600 | O-methyltransferase, putative, expressed | - |
| 6 | Sobic.004G161751 | - | - |
| 7 | Sobic.006G008000 | O-methyltransferase, putative, expressed | - |
| 8 | Sobic.006G235100 | expressed protein | - |
| 9 | Sobic.009G171500 | expressed protein | - |
| 10 | Sobic.009G131400 | basic 7S globulin precursor, putative, expressed | - |
| 11 | Sobic.002G012500 | DUF538 domain containing protein, putative, expressed | - |
| 12 | Sobic.006G007900 | SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed | - |
| 13 | Sobic.003G415000 | DUF567 domain containing protein, putative, expressed | - |
| 14 | Sobic.002G012300 | DUF538 domain containing protein, putative, expressed | - |
| 15 | Sobic.003G043600 | BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed | - |
| 16 | Sobic.003G268600 | - | - |
| 17 | Sobic.006G132800 | expressed protein | - |
| 18 | Sobic.001G259400 | tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed | K13464: jasmonate ZIM domain-containing protein |
| 19 | Sobic.002G012400 | DUF538 domain containing protein, putative, expressed | - |
| 20 | Sobic.010G175800 | "similar to Glutathione S-transferase GST 19, expressed in drought and oxidative stress"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
