Gene annotation
Transcriptome id Sobic.006G209600.3,Sobic.006G209600.1,Sobic.006G209600.2
Synonym
Functional annotation cytokinin inducible protein, putative, expressed
UniProt A0A1Z5RFJ7 , C5YFL4 , A0A1B6PN43
Pfam PF14303
Panther DB PTHR11260 PTHR11260:SF120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47680 : DNA binding
RAP-DB (Rice) LOC_Os10g24040.1 : transposon protein, putative, Pong sub-class, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G490800 pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.003G440200 expressed protein -
3 Sobic.009G259300 rhamnogalacturonate lyase, putative, expressed K18195: RGL4, rhamnogalacturonan endolyase
4 Sobic.007G208400 pentatricopeptide, putative, expressed -
5 Sobic.006G214800 heavy metal-associated domain containing protein, expressed -
6 Sobic.010G250500 DEFL21 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.010G067000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.004G176500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.002G088800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.009G147700 expressed protein -
11 Sobic.006G137300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
12 Sobic.009G024800 DNA repair protein Rad51, putative, expressed K10869: RAD51L1, RAD51-like protein 1
13 Sobic.008G075100 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K03575: A/G-specific adenine glycosylase
14 Sobic.004G108300 heavy-metal-associated domain-containing protein, putative, expressed -
15 Sobic.010G174900 S-locus-like receptor protein kinase, putative, expressed -
16 Sobic.009G192700 ATBARD1/BARD1, putative, expressed K10683: BRCA1-associated RING domain protein 1
17 Sobic.009G189600 - -
18 Sobic.009G042500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
20 Sobic.007G221201 - -


Gene co-expression network
sample Sobic006G209600 Sobic006G209600 Sobic001G490800 Sobic001G490800 Sobic006G209600--Sobic001G490800 Sobic003G440200 Sobic003G440200 Sobic006G209600--Sobic003G440200 Sobic009G259300 Sobic009G259300 Sobic006G209600--Sobic009G259300 Sobic007G208400 Sobic007G208400 Sobic006G209600--Sobic007G208400 Sobic006G214800 Sobic006G214800 Sobic006G209600--Sobic006G214800 Sobic010G250500 Sobic010G250500 Sobic006G209600--Sobic010G250500 Sobic010G067000 Sobic010G067000 Sobic006G209600--Sobic010G067000 Sobic004G176500 Sobic004G176500 Sobic006G209600--Sobic004G176500 Sobic002G088800 Sobic002G088800 Sobic006G209600--Sobic002G088800 Sobic001G377900 Sobic001G377900 Sobic001G490800--Sobic001G377900 Sobic009G166400 Sobic009G166400 Sobic001G490800--Sobic009G166400 Sobic010G244400 Sobic010G244400 Sobic001G490800--Sobic010G244400 Sobic004G255400 Sobic004G255400 Sobic001G490800--Sobic004G255400 Sobic004G270100 Sobic004G270100 Sobic001G490800--Sobic004G270100 Sobic005G076700 Sobic005G076700 Sobic001G490800--Sobic005G076700 Sobic003G109000 Sobic003G109000 Sobic001G490800--Sobic003G109000 Sobic001G226200 Sobic001G226200 Sobic001G490800--Sobic001G226200 Sobic009G166650 Sobic009G166650 Sobic001G490800--Sobic009G166650 Sobic003G440200--Sobic009G259300 Sobic003G440200--Sobic003G109000 Sobic003G440200--Sobic001G377900 Sobic010G127901 Sobic010G127901 Sobic003G440200--Sobic010G127901 Sobic004G173300 Sobic004G173300 Sobic003G440200--Sobic004G173300 Sobic002G280800 Sobic002G280800 Sobic003G440200--Sobic002G280800 Sobic006G060400 Sobic006G060400 Sobic003G440200--Sobic006G060400 Sobic003G440200--Sobic006G214800 Sobic005G131500 Sobic005G131500 Sobic003G440200--Sobic005G131500 Sobic009G259300--Sobic003G440200 Sobic006G159350 Sobic006G159350 Sobic009G259300--Sobic006G159350 Sobic009G259300--Sobic006G060400 Sobic003G034350 Sobic003G034350 Sobic009G259300--Sobic003G034350 Sobic008G134401 Sobic008G134401 Sobic009G259300--Sobic008G134401 Sobic001G042100 Sobic001G042100 Sobic009G259300--Sobic001G042100 Sobic001G334800 Sobic001G334800 Sobic009G259300--Sobic001G334800 Sobic004G091800 Sobic004G091800 Sobic009G259300--Sobic004G091800 Sobic008G174850 Sobic008G174850 Sobic009G259300--Sobic008G174850 Sobic003G119100 Sobic003G119100 Sobic007G208400--Sobic003G119100 Sobic002G057050 Sobic002G057050 Sobic007G208400--Sobic002G057050 Sobic009G063450 Sobic009G063450 Sobic007G208400--Sobic009G063450 Sobic004G174800 Sobic004G174800 Sobic007G208400--Sobic004G174800 Sobic004G320200 Sobic004G320200 Sobic007G208400--Sobic004G320200 Sobic008G082800 Sobic008G082800 Sobic007G208400--Sobic008G082800 Sobic007G208400--Sobic004G176500 Sobic007G208400--Sobic006G209600 Sobic009G063500 Sobic009G063500 Sobic007G208400--Sobic009G063500 Sobic003G334500 Sobic003G334500 Sobic006G214800--Sobic003G334500 Sobic006G210266 Sobic006G210266 Sobic006G214800--Sobic006G210266 Sobic006G243300 Sobic006G243300 Sobic006G214800--Sobic006G243300 Sobic010G207175 Sobic010G207175 Sobic006G214800--Sobic010G207175 Sobic007G020400 Sobic007G020400 Sobic006G214800--Sobic007G020400 Sobic001G180950 Sobic001G180950 Sobic006G214800--Sobic001G180950 Sobic001G432400 Sobic001G432400 Sobic006G214800--Sobic001G432400 Sobic003G013300 Sobic003G013300 Sobic006G214800--Sobic003G013300 Sobic007G179100 Sobic007G179100 Sobic006G214800--Sobic007G179100 Sobic010G250500--Sobic010G067000 Sobic010G250500--Sobic010G244400 Sobic003G276800 Sobic003G276800 Sobic010G250500--Sobic003G276800 Sobic009G136200 Sobic009G136200 Sobic010G250500--Sobic009G136200 Sobic010G250500--Sobic001G490800 Sobic010G250500--Sobic004G176500 Sobic010G066900 Sobic010G066900 Sobic010G250500--Sobic010G066900 Sobic003G236100 Sobic003G236100 Sobic010G250500--Sobic003G236100 Sobic005G182300 Sobic005G182300 Sobic010G250500--Sobic005G182300 Sobic001G200600 Sobic001G200600 Sobic010G067000--Sobic001G200600 Sobic003G433600 Sobic003G433600 Sobic010G067000--Sobic003G433600 Sobic008G009300 Sobic008G009300 Sobic010G067000--Sobic008G009300 Sobic007G179500 Sobic007G179500 Sobic010G067000--Sobic007G179500 Sobic004G250100 Sobic004G250100 Sobic010G067000--Sobic004G250100 Sobic009G042500 Sobic009G042500 Sobic010G067000--Sobic009G042500 Sobic002G111700 Sobic002G111700 Sobic010G067000--Sobic002G111700 Sobic003G203100 Sobic003G203100 Sobic010G067000--Sobic003G203100 Sobic009G226000 Sobic009G226000 Sobic010G067000--Sobic009G226000 Sobic004G176500--Sobic010G066900 Sobic009G238700 Sobic009G238700 Sobic004G176500--Sobic009G238700 Sobic001G347100 Sobic001G347100 Sobic004G176500--Sobic001G347100 Sobic007G179600 Sobic007G179600 Sobic004G176500--Sobic007G179600 Sobic004G128666 Sobic004G128666 Sobic004G176500--Sobic004G128666 Sobic005G210700 Sobic005G210700 Sobic004G176500--Sobic005G210700 Sobic008G075100 Sobic008G075100 Sobic004G176500--Sobic008G075100 Sobic002G172500 Sobic002G172500 Sobic004G176500--Sobic002G172500 Sobic004G241000 Sobic004G241000 Sobic004G176500--Sobic004G241000 Sobic002G385200 Sobic002G385200 Sobic002G088800--Sobic002G385200 Sobic002G088800--Sobic005G210700 Sobic001G001200 Sobic001G001200 Sobic002G088800--Sobic001G001200 Sobic003G051500 Sobic003G051500 Sobic002G088800--Sobic003G051500 Sobic005G011000 Sobic005G011000 Sobic002G088800--Sobic005G011000 Sobic003G128000 Sobic003G128000 Sobic002G088800--Sobic003G128000 Sobic006G099600 Sobic006G099600 Sobic002G088800--Sobic006G099600 Sobic001G240850 Sobic001G240850 Sobic002G088800--Sobic001G240850 Sobic010G085000 Sobic010G085000 Sobic002G088800--Sobic010G085000
Octagon: transcription factors


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