Gene annotation
Transcriptome id Sobic.010G250500.1
Synonym Sb10g028880
Functional annotation DEFL21 - Defensin and Defensin-like DEFL family, expressed
UniProt A0A194YMD9
Pfam PF13812 PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF798
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03580 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os06g48660.1 : DEFL21 - Defensin and Defensin-like DEFL family, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G321600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G067000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
2 Sobic.010G244400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
3 Sobic.003G276800 expressed protein -
4 Sobic.009G136200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.001G490800 pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.004G176500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.010G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.003G236100 pentatricopeptide, putative, expressed -
9 Sobic.005G182300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
10 Sobic.003G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.004G255300 pentatricopeptide, putative, expressed -
12 Sobic.003G276901 - K13210: far upstream element-binding protein
13 Sobic.006G209600 cytokinin inducible protein, putative, expressed -
14 Sobic.002G340500 oligonucleotide/oligosaccharide-binding fold containing 2B, putative, expressed -
15 Sobic.001G105400 PPR repeat containing protein, expressed -
16 Sobic.005G230100 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.007G179600 pentatricopeptide, putative, expressed -
18 Sobic.009G251700 DNA ligase, putative, expressed -
19 Sobic.004G107800 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
20 Sobic.001G026400 expressed protein K15446: TRM13, tRNA:m4X modification enzyme


Gene co-expression network
sample Sobic010G250500 Sobic010G250500 Sobic010G067000 Sobic010G067000 Sobic010G250500--Sobic010G067000 Sobic010G244400 Sobic010G244400 Sobic010G250500--Sobic010G244400 Sobic003G276800 Sobic003G276800 Sobic010G250500--Sobic003G276800 Sobic009G136200 Sobic009G136200 Sobic010G250500--Sobic009G136200 Sobic001G490800 Sobic001G490800 Sobic010G250500--Sobic001G490800 Sobic004G176500 Sobic004G176500 Sobic010G250500--Sobic004G176500 Sobic010G066900 Sobic010G066900 Sobic010G250500--Sobic010G066900 Sobic003G236100 Sobic003G236100 Sobic010G250500--Sobic003G236100 Sobic005G182300 Sobic005G182300 Sobic010G250500--Sobic005G182300 Sobic001G200600 Sobic001G200600 Sobic010G067000--Sobic001G200600 Sobic003G433600 Sobic003G433600 Sobic010G067000--Sobic003G433600 Sobic008G009300 Sobic008G009300 Sobic010G067000--Sobic008G009300 Sobic007G179500 Sobic007G179500 Sobic010G067000--Sobic007G179500 Sobic004G250100 Sobic004G250100 Sobic010G067000--Sobic004G250100 Sobic009G042500 Sobic009G042500 Sobic010G067000--Sobic009G042500 Sobic002G111700 Sobic002G111700 Sobic010G067000--Sobic002G111700 Sobic003G203100 Sobic003G203100 Sobic010G067000--Sobic003G203100 Sobic009G226000 Sobic009G226000 Sobic010G067000--Sobic009G226000 Sobic004G255400 Sobic004G255400 Sobic010G244400--Sobic004G255400 Sobic003G096750 Sobic003G096750 Sobic010G244400--Sobic003G096750 Sobic006G193801 Sobic006G193801 Sobic010G244400--Sobic006G193801 Sobic008G040201 Sobic008G040201 Sobic010G244400--Sobic008G040201 Sobic001G163500 Sobic001G163500 Sobic010G244400--Sobic001G163500 Sobic004G103450 Sobic004G103450 Sobic010G244400--Sobic004G103450 Sobic004G007133 Sobic004G007133 Sobic010G244400--Sobic004G007133 Sobic001G291701 Sobic001G291701 Sobic010G244400--Sobic001G291701 Sobic003G282400 Sobic003G282400 Sobic010G244400--Sobic003G282400 Sobic009G166650 Sobic009G166650 Sobic003G276800--Sobic009G166650 Sobic002G095800 Sobic002G095800 Sobic003G276800--Sobic002G095800 Sobic003G276800--Sobic010G067000 Sobic003G276800--Sobic010G250500 Sobic005G024600 Sobic005G024600 Sobic003G276800--Sobic005G024600 Sobic009G166400 Sobic009G166400 Sobic003G276800--Sobic009G166400 Sobic003G107000 Sobic003G107000 Sobic003G276800--Sobic003G107000 Sobic003G058100 Sobic003G058100 Sobic003G276800--Sobic003G058100 Sobic004G203800 Sobic004G203800 Sobic003G276800--Sobic004G203800 Sobic007G179600 Sobic007G179600 Sobic009G136200--Sobic007G179600 Sobic001G412200 Sobic001G412200 Sobic009G136200--Sobic001G412200 Sobic002G042900 Sobic002G042900 Sobic009G136200--Sobic002G042900 Sobic001G001200 Sobic001G001200 Sobic009G136200--Sobic001G001200 Sobic002G385200 Sobic002G385200 Sobic009G136200--Sobic002G385200 Sobic003G051500 Sobic003G051500 Sobic009G136200--Sobic003G051500 Sobic009G136200--Sobic004G250100 Sobic002G167400 Sobic002G167400 Sobic009G136200--Sobic002G167400 Sobic009G136200--Sobic003G203100 Sobic001G377900 Sobic001G377900 Sobic001G490800--Sobic001G377900 Sobic001G490800--Sobic009G166400 Sobic001G490800--Sobic010G244400 Sobic001G490800--Sobic004G255400 Sobic004G270100 Sobic004G270100 Sobic001G490800--Sobic004G270100 Sobic005G076700 Sobic005G076700 Sobic001G490800--Sobic005G076700 Sobic003G109000 Sobic003G109000 Sobic001G490800--Sobic003G109000 Sobic001G226200 Sobic001G226200 Sobic001G490800--Sobic001G226200 Sobic001G490800--Sobic009G166650 Sobic004G176500--Sobic010G066900 Sobic009G238700 Sobic009G238700 Sobic004G176500--Sobic009G238700 Sobic001G347100 Sobic001G347100 Sobic004G176500--Sobic001G347100 Sobic004G176500--Sobic007G179600 Sobic004G128666 Sobic004G128666 Sobic004G176500--Sobic004G128666 Sobic005G210700 Sobic005G210700 Sobic004G176500--Sobic005G210700 Sobic008G075100 Sobic008G075100 Sobic004G176500--Sobic008G075100 Sobic002G172500 Sobic002G172500 Sobic004G176500--Sobic002G172500 Sobic004G241000 Sobic004G241000 Sobic004G176500--Sobic004G241000 Sobic001G149100 Sobic001G149100 Sobic010G066900--Sobic001G149100 Sobic010G066900--Sobic004G176500 Sobic010G066900--Sobic009G238700 Sobic008G163400 Sobic008G163400 Sobic010G066900--Sobic008G163400 Sobic010G066900--Sobic004G241000 Sobic003G299200 Sobic003G299200 Sobic010G066900--Sobic003G299200 Sobic003G239000 Sobic003G239000 Sobic010G066900--Sobic003G239000 Sobic010G066900--Sobic001G347100 Sobic007G123100 Sobic007G123100 Sobic010G066900--Sobic007G123100 Sobic004G346200 Sobic004G346200 Sobic003G236100--Sobic004G346200 Sobic001G122200 Sobic001G122200 Sobic003G236100--Sobic001G122200 Sobic003G236100--Sobic001G001200 Sobic005G221550 Sobic005G221550 Sobic003G236100--Sobic005G221550 Sobic006G033380 Sobic006G033380 Sobic003G236100--Sobic006G033380 Sobic002G059800 Sobic002G059800 Sobic003G236100--Sobic002G059800 Sobic005G148400 Sobic005G148400 Sobic003G236100--Sobic005G148400 Sobic004G217900 Sobic004G217900 Sobic003G236100--Sobic004G217900 Sobic010G190900 Sobic010G190900 Sobic003G236100--Sobic010G190900 Sobic005G182300--Sobic003G109000 Sobic005G182300--Sobic010G244400 Sobic003G327300 Sobic003G327300 Sobic005G182300--Sobic003G327300 Sobic003G357900 Sobic003G357900 Sobic005G182300--Sobic003G357900 Sobic001G105400 Sobic001G105400 Sobic005G182300--Sobic001G105400 Sobic009G170050 Sobic009G170050 Sobic005G182300--Sobic009G170050 Sobic005G182300--Sobic004G255400 Sobic001G217850 Sobic001G217850 Sobic005G182300--Sobic001G217850 Sobic006G174050 Sobic006G174050 Sobic005G182300--Sobic006G174050
Octagon: transcription factors


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