Gene annotation
Transcriptome id Sobic.006G255000.1,Sobic.006G255000.2
Synonym Sb06g031890
Functional annotation TLD family protein, putative, expressed
UniProt C5Y9Y7 , C5Y9Y8
Pfam PF07534
Panther DB PTHR23354 PTHR23354:SF67
NCBI CDD KOG4636; Uncharacterized conserved protein with TLDc domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39590 : TLD-domain containing nucleolar protein
RAP-DB (Rice) LOC_Os04g56790.1 : TLD family protein, putative, expressed
MaizeGDB (Corn) Zm00025a009416
Brachypodium KQJ85143
Barley HORVU4Hr1G087970.1 , HORVU3Hr1G080450.1
Wheat TraesCS2B02G519600 , TraesCS2B02G519600 , TraesCS2B02G519600 , TraesCS2B02G519600 , TraesCS2B02G519600 , TraesCS2A02G491400 , TraesCS2D02G491700 , TraesCS2A02G491400
Populus -


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cDNA sequences
Sobic.006G255000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G030100 glycosyltransferase, putative, expressed -
2 Sobic.010G051300 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.003G328700 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
4 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
5 Sobic.004G065200 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
6 Sobic.001G394600 expressed protein -
7 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.010G172500 ATP synthase, putative, expressed K02147: ATPeV1B, V-type H+-transporting ATPase subunit B
9 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
10 Sobic.004G202700 expressed protein K10268: F-box and leucine-rich repeat protein 2/20
11 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
12 Sobic.002G116900 expressed protein -
13 Sobic.001G048200 elongation factor P, putative, expressed -
14 Sobic.009G209200 serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
15 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
16 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
18 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
19 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
20 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3


Gene co-expression network
sample Sobic006G255000 Sobic006G255000 Sobic004G030100 Sobic004G030100 Sobic006G255000--Sobic004G030100 Sobic010G051300 Sobic010G051300 Sobic006G255000--Sobic010G051300 Sobic003G328700 Sobic003G328700 Sobic006G255000--Sobic003G328700 Sobic001G464100 Sobic001G464100 Sobic006G255000--Sobic001G464100 Sobic004G065200 Sobic004G065200 Sobic006G255000--Sobic004G065200 Sobic001G394600 Sobic001G394600 Sobic006G255000--Sobic001G394600 Sobic001G263000 Sobic001G263000 Sobic006G255000--Sobic001G263000 Sobic010G172500 Sobic010G172500 Sobic006G255000--Sobic010G172500 Sobic006G244700 Sobic006G244700 Sobic006G255000--Sobic006G244700 Sobic007G002300 Sobic007G002300 Sobic004G030100--Sobic007G002300 Sobic006G058100 Sobic006G058100 Sobic004G030100--Sobic006G058100 Sobic010G005600 Sobic010G005600 Sobic004G030100--Sobic010G005600 Sobic002G143500 Sobic002G143500 Sobic004G030100--Sobic002G143500 Sobic010G175500 Sobic010G175500 Sobic004G030100--Sobic010G175500 Sobic009G178300 Sobic009G178300 Sobic004G030100--Sobic009G178300 Sobic001G000200 Sobic001G000200 Sobic004G030100--Sobic001G000200 Sobic004G021200 Sobic004G021200 Sobic004G030100--Sobic004G021200 Sobic001G261200 Sobic001G261200 Sobic004G030100--Sobic001G261200 Sobic002G116900 Sobic002G116900 Sobic010G051300--Sobic002G116900 Sobic008G104200 Sobic008G104200 Sobic010G051300--Sobic008G104200 Sobic005G168600 Sobic005G168600 Sobic010G051300--Sobic005G168600 Sobic010G051300--Sobic010G172500 Sobic010G051300--Sobic001G394600 Sobic004G296400 Sobic004G296400 Sobic010G051300--Sobic004G296400 Sobic006G217000 Sobic006G217000 Sobic010G051300--Sobic006G217000 Sobic008G032600 Sobic008G032600 Sobic010G051300--Sobic008G032600 Sobic003G233600 Sobic003G233600 Sobic010G051300--Sobic003G233600 Sobic009G114800 Sobic009G114800 Sobic003G328700--Sobic009G114800 Sobic003G328700--Sobic006G255000 Sobic003G328700--Sobic001G464100 Sobic003G328700--Sobic001G263000 Sobic010G043600 Sobic010G043600 Sobic003G328700--Sobic010G043600 Sobic001G372000 Sobic001G372000 Sobic003G328700--Sobic001G372000 Sobic001G291100 Sobic001G291100 Sobic003G328700--Sobic001G291100 Sobic008G096100 Sobic008G096100 Sobic003G328700--Sobic008G096100 Sobic001G096300 Sobic001G096300 Sobic003G328700--Sobic001G096300 Sobic001G467000 Sobic001G467000 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic003G154700 Sobic003G154700 Sobic001G464100--Sobic003G154700 Sobic001G464100--Sobic001G291100 Sobic001G119300 Sobic001G119300 Sobic001G464100--Sobic001G119300 Sobic002G313500 Sobic002G313500 Sobic001G464100--Sobic002G313500 Sobic001G281600 Sobic001G281600 Sobic001G464100--Sobic001G281600 Sobic003G045400 Sobic003G045400 Sobic001G464100--Sobic003G045400 Sobic010G249300 Sobic010G249300 Sobic001G464100--Sobic010G249300 Sobic001G123000 Sobic001G123000 Sobic004G065200--Sobic001G123000 Sobic006G052500 Sobic006G052500 Sobic004G065200--Sobic006G052500 Sobic003G401000 Sobic003G401000 Sobic004G065200--Sobic003G401000 Sobic004G065200--Sobic001G394600 Sobic007G203500 Sobic007G203500 Sobic004G065200--Sobic007G203500 Sobic002G361300 Sobic002G361300 Sobic004G065200--Sobic002G361300 Sobic007G134600 Sobic007G134600 Sobic004G065200--Sobic007G134600 Sobic006G114500 Sobic006G114500 Sobic004G065200--Sobic006G114500 Sobic004G065200--Sobic001G464100 Sobic001G394600--Sobic002G361300 Sobic001G120300 Sobic001G120300 Sobic001G394600--Sobic001G120300 Sobic001G394600--Sobic006G114500 Sobic004G339100 Sobic004G339100 Sobic001G394600--Sobic004G339100 Sobic010G205800 Sobic010G205800 Sobic001G394600--Sobic010G205800 Sobic001G201400 Sobic001G201400 Sobic001G394600--Sobic001G201400 Sobic007G024700 Sobic007G024700 Sobic001G394600--Sobic007G024700 Sobic001G394600--Sobic001G000200 Sobic004G158700 Sobic004G158700 Sobic001G394600--Sobic004G158700 Sobic009G004600 Sobic009G004600 Sobic001G263000--Sobic009G004600 Sobic001G263000--Sobic006G244700 Sobic009G033900 Sobic009G033900 Sobic001G263000--Sobic009G033900 Sobic002G209400 Sobic002G209400 Sobic001G263000--Sobic002G209400 Sobic002G268400 Sobic002G268400 Sobic001G263000--Sobic002G268400 Sobic002G039000 Sobic002G039000 Sobic001G263000--Sobic002G039000 Sobic004G074300 Sobic004G074300 Sobic001G263000--Sobic004G074300 Sobic004G356900 Sobic004G356900 Sobic001G263000--Sobic004G356900 Sobic010G057900 Sobic010G057900 Sobic001G263000--Sobic010G057900 Sobic010G172500--Sobic001G096300 Sobic010G172500--Sobic010G051300 Sobic004G185600 Sobic004G185600 Sobic010G172500--Sobic004G185600 Sobic009G219000 Sobic009G219000 Sobic010G172500--Sobic009G219000 Sobic002G332750 Sobic002G332750 Sobic010G172500--Sobic002G332750 Sobic010G172500--Sobic006G052500 Sobic009G245800 Sobic009G245800 Sobic010G172500--Sobic009G245800 Sobic001G489700 Sobic001G489700 Sobic010G172500--Sobic001G489700 Sobic006G202200 Sobic006G202200 Sobic010G172500--Sobic006G202200 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic005G044800 Sobic005G044800 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800
Octagon: transcription factors


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