Gene annotation
Transcriptome id Sobic.007G014100.1
Synonym Sb07g001270
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5YLY9
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF143
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G71691 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os08g02094.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a040227 , Zm00025a040233
Brachypodium KQK06198 , PNT66524
Barley HORVU7Hr1G076290.5 , HORVU7Hr1G076290.4 , HORVU7Hr1G076290.7 , HORVU7Hr1G076290.6 , HORVU7Hr1G076290.1 , HORVU7Hr1G076290.3 , HORVU7Hr1G076290.2
Wheat TraesCS7A02G319200 , TraesCS7D02G315700 , TraesCS7B02G220000 , TraesCS7B02G220000 , TraesCS2D02G044400 , TraesCS7A02G319200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
2 Sobic.009G012400 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.008G180200 expressed protein -
4 Sobic.003G005500 B3 DNA binding domain containing protein, expressed -
5 Sobic.008G180400 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
6 Sobic.008G046200 PHD-finger family protein, expressed -
7 Sobic.001G095432 - -
8 Sobic.010G111750 - -
9 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
10 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
11 Sobic.009G125800 expressed protein -
12 Sobic.K040800 formin-like protein 20, putative, expressed -
13 Sobic.007G146200 pectinesterase, putative, expressed K01051: pectinesterase
14 Sobic.001G010500 frigida, putative, expressed -
15 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
16 Sobic.007G102300 formin, putative, expressed -
17 Sobic.010G030000 leucine rich repeat protein, putative, expressed -
18 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
19 Sobic.006G115900 fasciclin domain containing protein, expressed -
20 Sobic.010G243100 RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2


Gene co-expression network
sample Sobic007G014100 Sobic007G014100 Sobic003G423800 Sobic003G423800 Sobic007G014100--Sobic003G423800 Sobic009G012400 Sobic009G012400 Sobic007G014100--Sobic009G012400 Sobic008G180200 Sobic008G180200 Sobic007G014100--Sobic008G180200 Sobic003G005500 Sobic003G005500 Sobic007G014100--Sobic003G005500 Sobic008G180400 Sobic008G180400 Sobic007G014100--Sobic008G180400 Sobic008G046200 Sobic008G046200 Sobic007G014100--Sobic008G046200 Sobic001G095432 Sobic001G095432 Sobic007G014100--Sobic001G095432 Sobic010G111750 Sobic010G111750 Sobic007G014100--Sobic010G111750 Sobic003G129500 Sobic003G129500 Sobic007G014100--Sobic003G129500 Sobic003G423800--Sobic008G180400 Sobic003G423800--Sobic008G180200 Sobic010G222800 Sobic010G222800 Sobic003G423800--Sobic010G222800 Sobic003G423800--Sobic009G012400 Sobic003G343200 Sobic003G343200 Sobic003G423800--Sobic003G343200 Sobic003G423800--Sobic003G129500 Sobic010G009700 Sobic010G009700 Sobic003G423800--Sobic010G009700 Sobic002G112000 Sobic002G112000 Sobic003G423800--Sobic002G112000 Sobic003G423800--Sobic007G014100 Sobic009G012400--Sobic003G423800 Sobic009G012400--Sobic003G129500 Sobic009G012400--Sobic002G112000 Sobic009G012400--Sobic007G014100 Sobic009G012400--Sobic008G046200 Sobic009G136000 Sobic009G136000 Sobic009G012400--Sobic009G136000 Sobic009G012400--Sobic010G222800 Sobic003G002000 Sobic003G002000 Sobic009G012400--Sobic003G002000 Sobic010G024000 Sobic010G024000 Sobic009G012400--Sobic010G024000 Sobic008G180200--Sobic003G423800 Sobic008G180200--Sobic008G180400 Sobic008G180200--Sobic003G005500 Sobic002G286632 Sobic002G286632 Sobic008G180200--Sobic002G286632 Sobic003G216600 Sobic003G216600 Sobic008G180200--Sobic003G216600 Sobic008G180200--Sobic010G009700 Sobic010G030000 Sobic010G030000 Sobic008G180200--Sobic010G030000 Sobic006G081700 Sobic006G081700 Sobic008G180200--Sobic006G081700 Sobic008G180200--Sobic007G014100 Sobic001G010500 Sobic001G010500 Sobic003G005500--Sobic001G010500 Sobic007G102300 Sobic007G102300 Sobic003G005500--Sobic007G102300 Sobic009G163400 Sobic009G163400 Sobic003G005500--Sobic009G163400 Sobic009G214500 Sobic009G214500 Sobic003G005500--Sobic009G214500 Sobic002G339666 Sobic002G339666 Sobic003G005500--Sobic002G339666 Sobic008G141900 Sobic008G141900 Sobic003G005500--Sobic008G141900 Sobic007G122700 Sobic007G122700 Sobic003G005500--Sobic007G122700 Sobic003G005500--Sobic002G286632 Sobic002G309100 Sobic002G309100 Sobic003G005500--Sobic002G309100 Sobic008G180400--Sobic003G423800 Sobic005G172700 Sobic005G172700 Sobic008G180400--Sobic005G172700 Sobic008G180400--Sobic008G180200 Sobic003G091300 Sobic003G091300 Sobic008G180400--Sobic003G091300 Sobic001G457600 Sobic001G457600 Sobic008G180400--Sobic001G457600 Sobic002G258000 Sobic002G258000 Sobic008G180400--Sobic002G258000 Sobic010G243100 Sobic010G243100 Sobic008G180400--Sobic010G243100 Sobic003G289700 Sobic003G289700 Sobic008G180400--Sobic003G289700 Sobic008G180400--Sobic002G112000 Sobic002G144600 Sobic002G144600 Sobic008G046200--Sobic002G144600 Sobic008G046200--Sobic003G005500 Sobic008G046200--Sobic007G122700 Sobic008G046200--Sobic003G129500 Sobic008G046200--Sobic002G286632 Sobic008G046200--Sobic009G012400 Sobic004G222200 Sobic004G222200 Sobic008G046200--Sobic004G222200 Sobic008G046200--Sobic008G141900 Sobic003G183466 Sobic003G183466 Sobic008G046200--Sobic003G183466 Sobic001G095432--Sobic007G014100 Sobic001G095432--Sobic003G005500 Sobic001G095432--Sobic008G046200 Sobic001G095432--Sobic003G423800 Sobic004G027150 Sobic004G027150 Sobic001G095432--Sobic004G027150 Sobic001G095432--Sobic009G214500 Sobic001G095432--Sobic001G010500 Sobic001G095432--Sobic008G180200 Sobic001G095432--Sobic009G163400 Sobic010G111750--Sobic003G091300 Sobic002G178700 Sobic002G178700 Sobic010G111750--Sobic002G178700 Sobic003G006000 Sobic003G006000 Sobic010G111750--Sobic003G006000 Sobic010G111750--Sobic002G258000 Sobic001G419500 Sobic001G419500 Sobic010G111750--Sobic001G419500 Sobic001G137500 Sobic001G137500 Sobic010G111750--Sobic001G137500 Sobic004G031501 Sobic004G031501 Sobic010G111750--Sobic004G031501 Sobic002G078900 Sobic002G078900 Sobic010G111750--Sobic002G078900 Sobic007G012600 Sobic007G012600 Sobic010G111750--Sobic007G012600 Sobic005G153000 Sobic005G153000 Sobic003G129500--Sobic005G153000 Sobic003G129500--Sobic002G112000 Sobic002G168000 Sobic002G168000 Sobic003G129500--Sobic002G168000 Sobic003G129500--Sobic009G012400 Sobic010G250400 Sobic010G250400 Sobic003G129500--Sobic010G250400 Sobic003G129500--Sobic003G423800 Sobic003G370300 Sobic003G370300 Sobic003G129500--Sobic003G370300 Sobic003G129500--Sobic010G222800 Sobic003G129500--Sobic003G183466
Octagon: transcription factors


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