Gene annotation
Transcriptome id Sobic.007G052800.1
Synonym Sb07g004270
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YHF5
Pfam -
Panther DB PTHR33430 PTHR33430:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07510 : -
RAP-DB (Rice) LOC_Os10g09930.1 : expressed protein
MaizeGDB (Corn) Zm00025a030046
Brachypodium KQJ96369 , PNT67213 , PNT67214
Barley HORVU7Hr1G047120.6 , HORVU7Hr1G047120.5 , HORVU7Hr1G047120.4 , HORVU7Hr1G047120.3 , HORVU7Hr1G047120.2 , HORVU7Hr1G047120.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G202000 expressed protein -
2 Sobic.003G227000 DUF623 domain containing protein, expressed -
3 Sobic.001G142300 expressed protein -
4 Sobic.003G288100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
5 Sobic.009G224500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.006G186700 histone H1-3(PubMedID : 26465154)@histone H1, putative, expressed K11275: histone H1/5
7 Sobic.005G075900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C1-like domain containing protein, expressed -
8 Sobic.002G353800 homeobox domain containing protein, expressed K09338: homeobox-leucine zipper protein
9 Sobic.001G004800 receptor protein kinase, putative, expressed -
10 Sobic.008G033300 sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
11 Sobic.007G124400 UNE2, putative, expressed -
12 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
13 Sobic.001G076800 expressed protein -
14 Sobic.010G099600 expressed protein -
15 Sobic.007G156700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.006G137500 B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
17 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
18 Sobic.003G057366 - K11254: histone H4
19 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
20 Sobic.001G372100 beta-amylase 3(PubMedID : 26465154)@beta-amylase 3(PubMedID : 26465154)@beta-amylase, putative, expressed -


Gene co-expression network
sample Sobic007G052800 Sobic007G052800 Sobic004G202000 Sobic004G202000 Sobic007G052800--Sobic004G202000 Sobic003G227000 Sobic003G227000 Sobic007G052800--Sobic003G227000 Sobic001G142300 Sobic001G142300 Sobic007G052800--Sobic001G142300 Sobic003G288100 Sobic003G288100 Sobic007G052800--Sobic003G288100 Sobic009G224500 Sobic009G224500 Sobic007G052800--Sobic009G224500 Sobic006G186700 Sobic006G186700 Sobic007G052800--Sobic006G186700 Sobic005G075900 Sobic005G075900 Sobic007G052800--Sobic005G075900 Sobic002G353800 Sobic002G353800 Sobic007G052800--Sobic002G353800 Sobic001G004800 Sobic001G004800 Sobic007G052800--Sobic001G004800 Sobic004G335600 Sobic004G335600 Sobic004G202000--Sobic004G335600 Sobic001G076800 Sobic001G076800 Sobic004G202000--Sobic001G076800 Sobic002G414700 Sobic002G414700 Sobic004G202000--Sobic002G414700 Sobic002G348100 Sobic002G348100 Sobic004G202000--Sobic002G348100 Sobic004G202000--Sobic003G288100 Sobic004G099500 Sobic004G099500 Sobic004G202000--Sobic004G099500 Sobic002G245900 Sobic002G245900 Sobic004G202000--Sobic002G245900 Sobic008G172100 Sobic008G172100 Sobic004G202000--Sobic008G172100 Sobic004G271400 Sobic004G271400 Sobic004G202000--Sobic004G271400 Sobic008G033400 Sobic008G033400 Sobic003G227000--Sobic008G033400 Sobic003G227000--Sobic004G202000 Sobic010G088700 Sobic010G088700 Sobic003G227000--Sobic010G088700 Sobic001G533000 Sobic001G533000 Sobic003G227000--Sobic001G533000 Sobic003G227000--Sobic001G076800 Sobic003G210100 Sobic003G210100 Sobic003G227000--Sobic003G210100 Sobic003G227000--Sobic001G004800 Sobic008G020100 Sobic008G020100 Sobic003G227000--Sobic008G020100 Sobic003G082100 Sobic003G082100 Sobic003G227000--Sobic003G082100 Sobic001G142300--Sobic004G202000 Sobic001G295100 Sobic001G295100 Sobic001G142300--Sobic001G295100 Sobic001G142300--Sobic003G288100 Sobic004G159400 Sobic004G159400 Sobic001G142300--Sobic004G159400 Sobic004G259432 Sobic004G259432 Sobic001G142300--Sobic004G259432 Sobic006G154400 Sobic006G154400 Sobic001G142300--Sobic006G154400 Sobic001G142300--Sobic002G353800 Sobic001G142300--Sobic004G335600 Sobic002G355100 Sobic002G355100 Sobic001G142300--Sobic002G355100 Sobic003G382600 Sobic003G382600 Sobic003G288100--Sobic003G382600 Sobic001G018300 Sobic001G018300 Sobic003G288100--Sobic001G018300 Sobic002G192000 Sobic002G192000 Sobic003G288100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic003G288100--Sobic001G231400 Sobic001G318700 Sobic001G318700 Sobic003G288100--Sobic001G318700 Sobic003G369100 Sobic003G369100 Sobic003G288100--Sobic003G369100 Sobic004G243100 Sobic004G243100 Sobic003G288100--Sobic004G243100 Sobic001G140900 Sobic001G140900 Sobic003G288100--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic003G288100--Sobic008G050600 Sobic001G471200 Sobic001G471200 Sobic009G224500--Sobic001G471200 Sobic006G103000 Sobic006G103000 Sobic009G224500--Sobic006G103000 Sobic009G240600 Sobic009G240600 Sobic009G224500--Sobic009G240600 Sobic002G329000 Sobic002G329000 Sobic009G224500--Sobic002G329000 Sobic001G192200 Sobic001G192200 Sobic009G224500--Sobic001G192200 Sobic007G002800 Sobic007G002800 Sobic009G224500--Sobic007G002800 Sobic001G231700 Sobic001G231700 Sobic009G224500--Sobic001G231700 Sobic004G228500 Sobic004G228500 Sobic009G224500--Sobic004G228500 Sobic005G093000 Sobic005G093000 Sobic009G224500--Sobic005G093000 Sobic001G313200 Sobic001G313200 Sobic006G186700--Sobic001G313200 Sobic001G372100 Sobic001G372100 Sobic006G186700--Sobic001G372100 Sobic006G274700 Sobic006G274700 Sobic006G186700--Sobic006G274700 Sobic002G291066 Sobic002G291066 Sobic006G186700--Sobic002G291066 Sobic001G529400 Sobic001G529400 Sobic006G186700--Sobic001G529400 Sobic010G047100 Sobic010G047100 Sobic006G186700--Sobic010G047100 Sobic006G186700--Sobic004G335600 Sobic001G247300 Sobic001G247300 Sobic006G186700--Sobic001G247300 Sobic005G186100 Sobic005G186100 Sobic006G186700--Sobic005G186100 Sobic010G099600 Sobic010G099600 Sobic005G075900--Sobic010G099600 Sobic007G156700 Sobic007G156700 Sobic005G075900--Sobic007G156700 Sobic001G437000 Sobic001G437000 Sobic005G075900--Sobic001G437000 Sobic005G075900--Sobic002G245900 Sobic001G219200 Sobic001G219200 Sobic005G075900--Sobic001G219200 Sobic002G278500 Sobic002G278500 Sobic005G075900--Sobic002G278500 Sobic005G122500 Sobic005G122500 Sobic005G075900--Sobic005G122500 Sobic002G140300 Sobic002G140300 Sobic005G075900--Sobic002G140300 Sobic001G440200 Sobic001G440200 Sobic005G075900--Sobic001G440200 Sobic009G075900 Sobic009G075900 Sobic002G353800--Sobic009G075900 Sobic003G303100 Sobic003G303100 Sobic002G353800--Sobic003G303100 Sobic004G203700 Sobic004G203700 Sobic002G353800--Sobic004G203700 Sobic009G159200 Sobic009G159200 Sobic002G353800--Sobic009G159200 Sobic002G353800--Sobic001G004800 Sobic002G353800--Sobic001G372100 Sobic001G070800 Sobic001G070800 Sobic002G353800--Sobic001G070800 Sobic002G353800--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic002G353800--Sobic003G345100 Sobic001G004800--Sobic004G203700 Sobic001G004800--Sobic002G353800 Sobic006G137800 Sobic006G137800 Sobic001G004800--Sobic006G137800 Sobic001G004800--Sobic001G313200 Sobic002G389400 Sobic002G389400 Sobic001G004800--Sobic002G389400 Sobic001G112200 Sobic001G112200 Sobic001G004800--Sobic001G112200 Sobic004G301300 Sobic004G301300 Sobic001G004800--Sobic004G301300 Sobic001G004800--Sobic001G529400 Sobic002G055700 Sobic002G055700 Sobic001G004800--Sobic002G055700
Octagon: transcription factors


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