Gene annotation
Transcriptome id Sobic.007G063900.1
Synonym
Functional annotation -
UniProt A0A1B6PG86
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G008900 Sphingoid base hydroxylase 2 SBH2 (At)(PubMedID : 27208977)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
2 Sobic.006G088900 AIG1, putative, expressed -
3 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
4 Sobic.002G196000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.008G010750 - -
6 Sobic.003G204400 hypothetical protein -
7 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
8 Sobic.010G117400 DUF538 domain containing protein, putative, expressed -
9 Sobic.003G097400 - -
10 Sobic.010G126900 lectin-like receptor kinase, putative, expressed -
11 Sobic.004G092200 - -
12 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G072900 stress responsive protein, putative, expressed -
14 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
15 Sobic.008G057400 S-locus-like receptor protein kinase, putative, expressed -
16 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
17 Sobic.004G008300 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
18 Sobic.010G214300 - -
19 Sobic.009G219300 expressed protein -
20 Sobic.002G193900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic007G063900 Sobic007G063900 Sobic004G008900 Sobic004G008900 Sobic007G063900--Sobic004G008900 Sobic006G088900 Sobic006G088900 Sobic007G063900--Sobic006G088900 Sobic002G013000 Sobic002G013000 Sobic007G063900--Sobic002G013000 Sobic002G196000 Sobic002G196000 Sobic007G063900--Sobic002G196000 Sobic008G010750 Sobic008G010750 Sobic007G063900--Sobic008G010750 Sobic003G204400 Sobic003G204400 Sobic007G063900--Sobic003G204400 Sobic010G117500 Sobic010G117500 Sobic007G063900--Sobic010G117500 Sobic010G117400 Sobic010G117400 Sobic007G063900--Sobic010G117400 Sobic003G097400 Sobic003G097400 Sobic007G063900--Sobic003G097400 Sobic004G008900--Sobic010G117500 Sobic004G008900--Sobic003G204400 Sobic004G008300 Sobic004G008300 Sobic004G008900--Sobic004G008300 Sobic003G204300 Sobic003G204300 Sobic004G008900--Sobic003G204300 Sobic010G126900 Sobic010G126900 Sobic004G008900--Sobic010G126900 Sobic004G008900--Sobic003G097400 Sobic009G076300 Sobic009G076300 Sobic004G008900--Sobic009G076300 Sobic005G216200 Sobic005G216200 Sobic004G008900--Sobic005G216200 Sobic010G126800 Sobic010G126800 Sobic004G008900--Sobic010G126800 Sobic008G057400 Sobic008G057400 Sobic006G088900--Sobic008G057400 Sobic002G366200 Sobic002G366200 Sobic006G088900--Sobic002G366200 Sobic008G010500 Sobic008G010500 Sobic006G088900--Sobic008G010500 Sobic002G028632 Sobic002G028632 Sobic006G088900--Sobic002G028632 Sobic006G088900--Sobic002G196000 Sobic005G177100 Sobic005G177100 Sobic006G088900--Sobic005G177100 Sobic001G231800 Sobic001G231800 Sobic006G088900--Sobic001G231800 Sobic004G121800 Sobic004G121800 Sobic006G088900--Sobic004G121800 Sobic005G072900 Sobic005G072900 Sobic006G088900--Sobic005G072900 Sobic002G089100 Sobic002G089100 Sobic002G013000--Sobic002G089100 Sobic002G088900 Sobic002G088900 Sobic002G013000--Sobic002G088900 Sobic003G204501 Sobic003G204501 Sobic002G013000--Sobic003G204501 Sobic006G246600 Sobic006G246600 Sobic002G013000--Sobic006G246600 Sobic004G008800 Sobic004G008800 Sobic002G013000--Sobic004G008800 Sobic002G013000--Sobic010G126900 Sobic003G188100 Sobic003G188100 Sobic002G013000--Sobic003G188100 Sobic001G316400 Sobic001G316400 Sobic002G013000--Sobic001G316400 Sobic003G080900 Sobic003G080900 Sobic002G013000--Sobic003G080900 Sobic002G196000--Sobic008G010500 Sobic002G196000--Sobic004G121800 Sobic010G214300 Sobic010G214300 Sobic002G196000--Sobic010G214300 Sobic001G272800 Sobic001G272800 Sobic002G196000--Sobic001G272800 Sobic002G196000--Sobic001G231800 Sobic004G121600 Sobic004G121600 Sobic002G196000--Sobic004G121600 Sobic003G007400 Sobic003G007400 Sobic002G196000--Sobic003G007400 Sobic001G342000 Sobic001G342000 Sobic002G196000--Sobic001G342000 Sobic007G186500 Sobic007G186500 Sobic002G196000--Sobic007G186500 Sobic001G243400 Sobic001G243400 Sobic008G010750--Sobic001G243400 Sobic002G346100 Sobic002G346100 Sobic008G010750--Sobic002G346100 Sobic001G243500 Sobic001G243500 Sobic008G010750--Sobic001G243500 Sobic006G277550 Sobic006G277550 Sobic008G010750--Sobic006G277550 Sobic008G044500 Sobic008G044500 Sobic008G010750--Sobic008G044500 Sobic003G348600 Sobic003G348600 Sobic008G010750--Sobic003G348600 Sobic007G058300 Sobic007G058300 Sobic008G010750--Sobic007G058300 Sobic010G272300 Sobic010G272300 Sobic008G010750--Sobic010G272300 Sobic007G114301 Sobic007G114301 Sobic008G010750--Sobic007G114301 Sobic003G204400--Sobic010G117500 Sobic003G204400--Sobic004G008300 Sobic003G204400--Sobic009G076300 Sobic003G204400--Sobic010G126800 Sobic003G204400--Sobic003G204300 Sobic003G441700 Sobic003G441700 Sobic003G204400--Sobic003G441700 Sobic003G204400--Sobic004G121800 Sobic005G216400 Sobic005G216400 Sobic003G204400--Sobic005G216400 Sobic003G204400--Sobic004G008900 Sobic010G117500--Sobic003G204400 Sobic010G117500--Sobic004G008300 Sobic010G117500--Sobic004G008900 Sobic010G117500--Sobic003G204300 Sobic010G117500--Sobic009G076300 Sobic010G117800 Sobic010G117800 Sobic010G117500--Sobic010G117800 Sobic010G117500--Sobic005G216200 Sobic006G168100 Sobic006G168100 Sobic010G117500--Sobic006G168100 Sobic010G117500--Sobic003G097400 Sobic001G360400 Sobic001G360400 Sobic010G117400--Sobic001G360400 Sobic001G183700 Sobic001G183700 Sobic010G117400--Sobic001G183700 Sobic010G117400--Sobic006G277550 Sobic004G316500 Sobic004G316500 Sobic010G117400--Sobic004G316500 Sobic009G072900 Sobic009G072900 Sobic010G117400--Sobic009G072900 Sobic009G009200 Sobic009G009200 Sobic010G117400--Sobic009G009200 Sobic003G405000 Sobic003G405000 Sobic010G117400--Sobic003G405000 Sobic003G273700 Sobic003G273700 Sobic010G117400--Sobic003G273700 Sobic003G152200 Sobic003G152200 Sobic010G117400--Sobic003G152200 Sobic003G097400--Sobic004G008300 Sobic003G097400--Sobic010G117500 Sobic009G177000 Sobic009G177000 Sobic003G097400--Sobic009G177000 Sobic003G097400--Sobic004G008900 Sobic003G097400--Sobic003G204400 Sobic005G110514 Sobic005G110514 Sobic003G097400--Sobic005G110514 Sobic003G097400--Sobic002G196000 Sobic005G131200 Sobic005G131200 Sobic003G097400--Sobic005G131200 Sobic001G482000 Sobic001G482000 Sobic003G097400--Sobic001G482000
Octagon: transcription factors


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