Gene annotation
Transcriptome id Sobic.002G193900.5
Synonym Sb02g024070
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt A0A1W0W4X4
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF63
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01900 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os09g23140.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046879
Brachypodium PNT64513
Barley -
Wheat TraesCS5D02G209200 , TraesCS5D02G209200 , TraesCS5A02G202800 , TraesCS5B02G201300 , TraesCS5B02G201300 , TraesCS5B02G201300 , TraesCS5A02G202800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
2 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
3 Sobic.010G126900 lectin-like receptor kinase, putative, expressed -
4 Sobic.003G204400 hypothetical protein -
5 Sobic.004G008900 Sphingoid base hydroxylase 2 SBH2 (At)(PubMedID : 27208977)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
6 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
7 Sobic.002G366200 NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.006G168100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.002G223500 asparate aminotransferase, putative, expressed -
10 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
11 Sobic.007G140000 wall-associated receptor kinase-like 22 precursor, putative, expressed -
12 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.002G096000 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
14 Sobic.001G014700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
16 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
18 Sobic.005G216200 O-methyltransferase, putative, expressed -
19 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.002G028632 - -


Gene co-expression network
sample Sobic002G193900 Sobic002G193900 Sobic010G117500 Sobic010G117500 Sobic002G193900--Sobic010G117500 Sobic005G100800 Sobic005G100800 Sobic002G193900--Sobic005G100800 Sobic010G126900 Sobic010G126900 Sobic002G193900--Sobic010G126900 Sobic003G204400 Sobic003G204400 Sobic002G193900--Sobic003G204400 Sobic004G008900 Sobic004G008900 Sobic002G193900--Sobic004G008900 Sobic007G193200 Sobic007G193200 Sobic002G193900--Sobic007G193200 Sobic002G366200 Sobic002G366200 Sobic002G193900--Sobic002G366200 Sobic006G168100 Sobic006G168100 Sobic002G193900--Sobic006G168100 Sobic002G223500 Sobic002G223500 Sobic002G193900--Sobic002G223500 Sobic010G117500--Sobic003G204400 Sobic004G008300 Sobic004G008300 Sobic010G117500--Sobic004G008300 Sobic010G117500--Sobic004G008900 Sobic003G204300 Sobic003G204300 Sobic010G117500--Sobic003G204300 Sobic009G076300 Sobic009G076300 Sobic010G117500--Sobic009G076300 Sobic010G117800 Sobic010G117800 Sobic010G117500--Sobic010G117800 Sobic005G216200 Sobic005G216200 Sobic010G117500--Sobic005G216200 Sobic010G117500--Sobic006G168100 Sobic003G097400 Sobic003G097400 Sobic010G117500--Sobic003G097400 Sobic005G100800--Sobic007G193200 Sobic005G110541 Sobic005G110541 Sobic005G100800--Sobic005G110541 Sobic004G261500 Sobic004G261500 Sobic005G100800--Sobic004G261500 Sobic008G109400 Sobic008G109400 Sobic005G100800--Sobic008G109400 Sobic001G271300 Sobic001G271300 Sobic005G100800--Sobic001G271300 Sobic001G395900 Sobic001G395900 Sobic005G100800--Sobic001G395900 Sobic003G154500 Sobic003G154500 Sobic005G100800--Sobic003G154500 Sobic006G230200 Sobic006G230200 Sobic005G100800--Sobic006G230200 Sobic002G041100 Sobic002G041100 Sobic005G100800--Sobic002G041100 Sobic005G075600 Sobic005G075600 Sobic010G126900--Sobic005G075600 Sobic010G126900--Sobic004G008900 Sobic002G013000 Sobic002G013000 Sobic010G126900--Sobic002G013000 Sobic001G326400 Sobic001G326400 Sobic010G126900--Sobic001G326400 Sobic010G126900--Sobic003G204400 Sobic010G126800 Sobic010G126800 Sobic010G126900--Sobic010G126800 Sobic003G020500 Sobic003G020500 Sobic010G126900--Sobic003G020500 Sobic001G218500 Sobic001G218500 Sobic010G126900--Sobic001G218500 Sobic010G126900--Sobic002G193900 Sobic003G204400--Sobic010G117500 Sobic003G204400--Sobic004G008300 Sobic003G204400--Sobic009G076300 Sobic003G204400--Sobic010G126800 Sobic003G204400--Sobic003G204300 Sobic003G441700 Sobic003G441700 Sobic003G204400--Sobic003G441700 Sobic004G121800 Sobic004G121800 Sobic003G204400--Sobic004G121800 Sobic005G216400 Sobic005G216400 Sobic003G204400--Sobic005G216400 Sobic003G204400--Sobic004G008900 Sobic004G008900--Sobic010G117500 Sobic004G008900--Sobic003G204400 Sobic004G008900--Sobic004G008300 Sobic004G008900--Sobic003G204300 Sobic004G008900--Sobic010G126900 Sobic004G008900--Sobic003G097400 Sobic004G008900--Sobic009G076300 Sobic004G008900--Sobic005G216200 Sobic004G008900--Sobic010G126800 Sobic007G193200--Sobic004G261500 Sobic004G079900 Sobic004G079900 Sobic007G193200--Sobic004G079900 Sobic001G181600 Sobic001G181600 Sobic007G193200--Sobic001G181600 Sobic007G193200--Sobic003G154500 Sobic001G218400 Sobic001G218400 Sobic007G193200--Sobic001G218400 Sobic005G033000 Sobic005G033000 Sobic007G193200--Sobic005G033000 Sobic001G454900 Sobic001G454900 Sobic007G193200--Sobic001G454900 Sobic005G119900 Sobic005G119900 Sobic007G193200--Sobic005G119900 Sobic003G441800 Sobic003G441800 Sobic007G193200--Sobic003G441800 Sobic002G028632 Sobic002G028632 Sobic002G366200--Sobic002G028632 Sobic003G357700 Sobic003G357700 Sobic002G366200--Sobic003G357700 Sobic007G177400 Sobic007G177400 Sobic002G366200--Sobic007G177400 Sobic003G443700 Sobic003G443700 Sobic002G366200--Sobic003G443700 Sobic002G025500 Sobic002G025500 Sobic002G366200--Sobic002G025500 Sobic007G064500 Sobic007G064500 Sobic002G366200--Sobic007G064500 Sobic008G010500 Sobic008G010500 Sobic002G366200--Sobic008G010500 Sobic002G366200--Sobic005G216400 Sobic002G366200--Sobic005G119900 Sobic005G217766 Sobic005G217766 Sobic006G168100--Sobic005G217766 Sobic006G168100--Sobic001G218400 Sobic006G168100--Sobic003G020500 Sobic001G299100 Sobic001G299100 Sobic006G168100--Sobic001G299100 Sobic002G111900 Sobic002G111900 Sobic006G168100--Sobic002G111900 Sobic004G121600 Sobic004G121600 Sobic006G168100--Sobic004G121600 Sobic002G183750 Sobic002G183750 Sobic006G168100--Sobic002G183750 Sobic003G441601 Sobic003G441601 Sobic006G168100--Sobic003G441601 Sobic008G033700 Sobic008G033700 Sobic006G168100--Sobic008G033700 Sobic002G223500--Sobic002G193900 Sobic004G152900 Sobic004G152900 Sobic002G223500--Sobic004G152900 Sobic004G129800 Sobic004G129800 Sobic002G223500--Sobic004G129800 Sobic003G204501 Sobic003G204501 Sobic002G223500--Sobic003G204501 Sobic002G306700 Sobic002G306700 Sobic002G223500--Sobic002G306700 Sobic004G079700 Sobic004G079700 Sobic002G223500--Sobic004G079700 Sobic007G109900 Sobic007G109900 Sobic002G223500--Sobic007G109900 Sobic004G153100 Sobic004G153100 Sobic002G223500--Sobic004G153100 Sobic007G065500 Sobic007G065500 Sobic002G223500--Sobic007G065500
Octagon: transcription factors


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