Gene annotation
Transcriptome id Sobic.002G223500.1
Synonym Sb02g026430
Functional annotation asparate aminotransferase, putative, expressed
UniProt C5X291
Pfam PF00266
Panther DB PTHR11751 PTHR11751:SF317
NCBI CDD KOG0257; Kynurenine aminotransferase, glutamine transaminase K
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77670 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os09g28050.1 : asparate aminotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a047232
Brachypodium KQJ90496
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G223500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G193900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
2 Sobic.004G152900 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
3 Sobic.004G129800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.003G204501 - -
5 Sobic.002G306700 expressed protein -
6 Sobic.004G079700 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
7 Sobic.007G109900 bZIP transcription factor domain containing protein, expressed -
8 Sobic.004G153100 disease resistance protein, putative, expressed -
9 Sobic.007G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
10 Sobic.006G243500 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
11 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
12 Sobic.003G440900 Invertase genes(PubMedID : 24456189)@"Beta-fructofuranosidase, cell wall Invertase 4 (Os)"(PubMedID : 27208977)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
13 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
14 Sobic.006G244400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
15 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
16 Sobic.003G275800 expressed protein -
17 Sobic.001G488100 OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed K14297: NUP98, ADAR2, nuclear pore complex protein Nup98-Nup96
18 Sobic.005G010900 expressed protein K14311: nuclear pore complex protein Nup188
19 Sobic.004G032800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.001G462600 retinoblastoma-binding protein-like, putative, expressed K14961: RBBP5, SWD1, COMPASS component SWD1


Gene co-expression network
sample Sobic002G223500 Sobic002G223500 Sobic002G193900 Sobic002G193900 Sobic002G223500--Sobic002G193900 Sobic004G152900 Sobic004G152900 Sobic002G223500--Sobic004G152900 Sobic004G129800 Sobic004G129800 Sobic002G223500--Sobic004G129800 Sobic003G204501 Sobic003G204501 Sobic002G223500--Sobic003G204501 Sobic002G306700 Sobic002G306700 Sobic002G223500--Sobic002G306700 Sobic004G079700 Sobic004G079700 Sobic002G223500--Sobic004G079700 Sobic007G109900 Sobic007G109900 Sobic002G223500--Sobic007G109900 Sobic004G153100 Sobic004G153100 Sobic002G223500--Sobic004G153100 Sobic007G065500 Sobic007G065500 Sobic002G223500--Sobic007G065500 Sobic010G117500 Sobic010G117500 Sobic002G193900--Sobic010G117500 Sobic005G100800 Sobic005G100800 Sobic002G193900--Sobic005G100800 Sobic010G126900 Sobic010G126900 Sobic002G193900--Sobic010G126900 Sobic003G204400 Sobic003G204400 Sobic002G193900--Sobic003G204400 Sobic004G008900 Sobic004G008900 Sobic002G193900--Sobic004G008900 Sobic007G193200 Sobic007G193200 Sobic002G193900--Sobic007G193200 Sobic002G366200 Sobic002G366200 Sobic002G193900--Sobic002G366200 Sobic006G168100 Sobic006G168100 Sobic002G193900--Sobic006G168100 Sobic002G193900--Sobic002G223500 Sobic004G152900--Sobic002G223500 Sobic004G161501 Sobic004G161501 Sobic004G152900--Sobic004G161501 Sobic002G162450 Sobic002G162450 Sobic004G152900--Sobic002G162450 Sobic004G062000 Sobic004G062000 Sobic004G152900--Sobic004G062000 Sobic004G152900--Sobic004G153100 Sobic006G222000 Sobic006G222000 Sobic004G152900--Sobic006G222000 Sobic007G022000 Sobic007G022000 Sobic004G152900--Sobic007G022000 Sobic005G053700 Sobic005G053700 Sobic004G152900--Sobic005G053700 Sobic004G152900--Sobic003G204501 Sobic004G129800--Sobic002G223500 Sobic003G419300 Sobic003G419300 Sobic004G129800--Sobic003G419300 Sobic004G214300 Sobic004G214300 Sobic004G129800--Sobic004G214300 Sobic006G124200 Sobic006G124200 Sobic004G129800--Sobic006G124200 Sobic004G112200 Sobic004G112200 Sobic004G129800--Sobic004G112200 Sobic003G019400 Sobic003G019400 Sobic004G129800--Sobic003G019400 Sobic009G102400 Sobic009G102400 Sobic004G129800--Sobic009G102400 Sobic009G058600 Sobic009G058600 Sobic004G129800--Sobic009G058600 Sobic010G090100 Sobic010G090100 Sobic004G129800--Sobic010G090100 Sobic004G008800 Sobic004G008800 Sobic003G204501--Sobic004G008800 Sobic002G013000 Sobic002G013000 Sobic003G204501--Sobic002G013000 Sobic002G088900 Sobic002G088900 Sobic003G204501--Sobic002G088900 Sobic002G089100 Sobic002G089100 Sobic003G204501--Sobic002G089100 Sobic006G246600 Sobic006G246600 Sobic003G204501--Sobic006G246600 Sobic003G204501--Sobic007G109900 Sobic001G316400 Sobic001G316400 Sobic003G204501--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic003G204501--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G204501--Sobic009G114000 Sobic002G306700--Sobic004G079700 Sobic002G114800 Sobic002G114800 Sobic002G306700--Sobic002G114800 Sobic003G432100 Sobic003G432100 Sobic002G306700--Sobic003G432100 Sobic002G408800 Sobic002G408800 Sobic002G306700--Sobic002G408800 Sobic008G156300 Sobic008G156300 Sobic002G306700--Sobic008G156300 Sobic007G120800 Sobic007G120800 Sobic002G306700--Sobic007G120800 Sobic006G243500 Sobic006G243500 Sobic002G306700--Sobic006G243500 Sobic004G163300 Sobic004G163300 Sobic002G306700--Sobic004G163300 Sobic005G075600 Sobic005G075600 Sobic002G306700--Sobic005G075600 Sobic004G079700--Sobic006G243500 Sobic004G079700--Sobic002G306700 Sobic004G161900 Sobic004G161900 Sobic004G079700--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic004G079700--Sobic003G368000 Sobic004G261500 Sobic004G261500 Sobic004G079700--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic004G079700--Sobic001G443100 Sobic004G079700--Sobic007G193200 Sobic004G079700--Sobic005G100800 Sobic005G033000 Sobic005G033000 Sobic004G079700--Sobic005G033000 Sobic007G109900--Sobic003G204501 Sobic007G109900--Sobic004G008800 Sobic002G087800 Sobic002G087800 Sobic007G109900--Sobic002G087800 Sobic005G169400 Sobic005G169400 Sobic007G109900--Sobic005G169400 Sobic007G128600 Sobic007G128600 Sobic007G109900--Sobic007G128600 Sobic006G244400 Sobic006G244400 Sobic007G109900--Sobic006G244400 Sobic003G428400 Sobic003G428400 Sobic007G109900--Sobic003G428400 Sobic005G024900 Sobic005G024900 Sobic007G109900--Sobic005G024900 Sobic001G322700 Sobic001G322700 Sobic007G109900--Sobic001G322700 Sobic004G153100--Sobic005G075600 Sobic003G106300 Sobic003G106300 Sobic004G153100--Sobic003G106300 Sobic003G020500 Sobic003G020500 Sobic004G153100--Sobic003G020500 Sobic007G120000 Sobic007G120000 Sobic004G153100--Sobic007G120000 Sobic007G021200 Sobic007G021200 Sobic004G153100--Sobic007G021200 Sobic005G069332 Sobic005G069332 Sobic004G153100--Sobic005G069332 Sobic004G153100--Sobic004G261500 Sobic004G299500 Sobic004G299500 Sobic004G153100--Sobic004G299500 Sobic004G153100--Sobic007G193200 Sobic006G220500 Sobic006G220500 Sobic007G065500--Sobic006G220500 Sobic007G065500--Sobic007G120800 Sobic002G194800 Sobic002G194800 Sobic007G065500--Sobic002G194800 Sobic006G259401 Sobic006G259401 Sobic007G065500--Sobic006G259401 Sobic009G139800 Sobic009G139800 Sobic007G065500--Sobic009G139800 Sobic007G065500--Sobic003G432100 Sobic009G234800 Sobic009G234800 Sobic007G065500--Sobic009G234800 Sobic003G428200 Sobic003G428200 Sobic007G065500--Sobic003G428200 Sobic001G000400 Sobic001G000400 Sobic007G065500--Sobic001G000400
Octagon: transcription factors


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