Gene annotation
Transcriptome id Sobic.007G088700.1
Synonym BPM1, ATBPM1, Sb07g007730
Functional annotation MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5YJH7
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF161
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os08g13030.1 : MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G176375 - -
2 Sobic.002G061800 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
3 Sobic.007G056900 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
4 Sobic.004G218000 SET domain containing protein, expressed -
5 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
6 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.007G116766 - -
8 Sobic.007G214800 expressed protein -
9 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
10 Sobic.005G021300 expressed protein -
11 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
12 Sobic.001G132200 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
13 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
14 Sobic.005G172700 expressed protein -
15 Sobic.009G011300 SCARECROW, putative, expressed -
16 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
17 Sobic.008G070600 leafbladeless1, putative, expressed -
18 Sobic.001G534400 - -
19 Sobic.003G108500 glycosyltransferase, putative, expressed -
20 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -


Gene co-expression network
sample Sobic007G088700 Sobic007G088700 Sobic003G176375 Sobic003G176375 Sobic007G088700--Sobic003G176375 Sobic002G061800 Sobic002G061800 Sobic007G088700--Sobic002G061800 Sobic007G056900 Sobic007G056900 Sobic007G088700--Sobic007G056900 Sobic004G218000 Sobic004G218000 Sobic007G088700--Sobic004G218000 Sobic003G027000 Sobic003G027000 Sobic007G088700--Sobic003G027000 Sobic003G090000 Sobic003G090000 Sobic007G088700--Sobic003G090000 Sobic007G116766 Sobic007G116766 Sobic007G088700--Sobic007G116766 Sobic007G214800 Sobic007G214800 Sobic007G088700--Sobic007G214800 Sobic003G217300 Sobic003G217300 Sobic007G088700--Sobic003G217300 Sobic003G176375--Sobic007G088700 Sobic003G176375--Sobic007G116766 Sobic003G142200 Sobic003G142200 Sobic003G176375--Sobic003G142200 Sobic003G176375--Sobic003G027000 Sobic005G041900 Sobic005G041900 Sobic003G176375--Sobic005G041900 Sobic003G176375--Sobic003G217300 Sobic003G176375--Sobic004G218000 Sobic003G176375--Sobic003G090000 Sobic006G062600 Sobic006G062600 Sobic003G176375--Sobic006G062600 Sobic001G457600 Sobic001G457600 Sobic002G061800--Sobic001G457600 Sobic002G061800--Sobic007G056900 Sobic009G042600 Sobic009G042600 Sobic002G061800--Sobic009G042600 Sobic002G258000 Sobic002G258000 Sobic002G061800--Sobic002G258000 Sobic002G061800--Sobic004G218000 Sobic008G180400 Sobic008G180400 Sobic002G061800--Sobic008G180400 Sobic002G061800--Sobic003G217300 Sobic001G137500 Sobic001G137500 Sobic002G061800--Sobic001G137500 Sobic005G163500 Sobic005G163500 Sobic002G061800--Sobic005G163500 Sobic007G056900--Sobic004G218000 Sobic005G164800 Sobic005G164800 Sobic007G056900--Sobic005G164800 Sobic007G056900--Sobic003G217300 Sobic007G056900--Sobic002G061800 Sobic006G143300 Sobic006G143300 Sobic007G056900--Sobic006G143300 Sobic007G056900--Sobic005G041900 Sobic001G132200 Sobic001G132200 Sobic007G056900--Sobic001G132200 Sobic007G056900--Sobic009G042600 Sobic007G056900--Sobic006G062600 Sobic004G218000--Sobic003G217300 Sobic004G218000--Sobic007G056900 Sobic004G218000--Sobic005G164800 Sobic002G349000 Sobic002G349000 Sobic004G218000--Sobic002G349000 Sobic002G221100 Sobic002G221100 Sobic004G218000--Sobic002G221100 Sobic004G218000--Sobic005G041900 Sobic003G022900 Sobic003G022900 Sobic004G218000--Sobic003G022900 Sobic004G218000--Sobic009G042600 Sobic010G180200 Sobic010G180200 Sobic004G218000--Sobic010G180200 Sobic003G027000--Sobic003G090000 Sobic001G218600 Sobic001G218600 Sobic003G027000--Sobic001G218600 Sobic002G299200 Sobic002G299200 Sobic003G027000--Sobic002G299200 Sobic005G070301 Sobic005G070301 Sobic003G027000--Sobic005G070301 Sobic004G313400 Sobic004G313400 Sobic003G027000--Sobic004G313400 Sobic003G396500 Sobic003G396500 Sobic003G027000--Sobic003G396500 Sobic006G215800 Sobic006G215800 Sobic003G027000--Sobic006G215800 Sobic003G044000 Sobic003G044000 Sobic003G027000--Sobic003G044000 Sobic009G152120 Sobic009G152120 Sobic003G027000--Sobic009G152120 Sobic003G090000--Sobic003G027000 Sobic003G090000--Sobic001G218600 Sobic003G090000--Sobic002G299200 Sobic003G090000--Sobic006G215800 Sobic003G090000--Sobic003G396500 Sobic003G090000--Sobic004G313400 Sobic003G090000--Sobic003G044000 Sobic003G090000--Sobic005G070301 Sobic010G157200 Sobic010G157200 Sobic003G090000--Sobic010G157200 Sobic004G322901 Sobic004G322901 Sobic007G116766--Sobic004G322901 Sobic002G147466 Sobic002G147466 Sobic007G116766--Sobic002G147466 Sobic005G215100 Sobic005G215100 Sobic007G116766--Sobic005G215100 Sobic009G014900 Sobic009G014900 Sobic007G116766--Sobic009G014900 Sobic010G207900 Sobic010G207900 Sobic007G116766--Sobic010G207900 Sobic002G099866 Sobic002G099866 Sobic007G116766--Sobic002G099866 Sobic007G086701 Sobic007G086701 Sobic007G116766--Sobic007G086701 Sobic001G261529 Sobic001G261529 Sobic007G116766--Sobic001G261529 Sobic003G092600 Sobic003G092600 Sobic007G116766--Sobic003G092600 Sobic002G106000 Sobic002G106000 Sobic007G214800--Sobic002G106000 Sobic007G216800 Sobic007G216800 Sobic007G214800--Sobic007G216800 Sobic007G214800--Sobic007G088700 Sobic002G136200 Sobic002G136200 Sobic007G214800--Sobic002G136200 Sobic008G098700 Sobic008G098700 Sobic007G214800--Sobic008G098700 Sobic001G088450 Sobic001G088450 Sobic007G214800--Sobic001G088450 Sobic007G040050 Sobic007G040050 Sobic007G214800--Sobic007G040050 Sobic009G152140 Sobic009G152140 Sobic007G214800--Sobic009G152140 Sobic009G066600 Sobic009G066600 Sobic007G214800--Sobic009G066600 Sobic003G217300--Sobic004G218000 Sobic003G217300--Sobic005G164800 Sobic003G217300--Sobic007G056900 Sobic010G067200 Sobic010G067200 Sobic003G217300--Sobic010G067200 Sobic003G217300--Sobic005G041900 Sobic003G217300--Sobic009G042600 Sobic002G259301 Sobic002G259301 Sobic003G217300--Sobic002G259301 Sobic003G217300--Sobic002G221100 Sobic007G193300 Sobic007G193300 Sobic003G217300--Sobic007G193300
Octagon: transcription factors


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