Gene annotation
Transcriptome id Sobic.007G149400.1
Synonym Sb07g022350
Functional annotation expressed protein
UniProt C5YM35
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g35560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234100 - -
2 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
3 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.007G122866 - -
5 Sobic.001G206600 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
6 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
7 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.004G195500 heavy metal associated domain containing protein, expressed -
9 Sobic.001G060600 cell division control protein 2 homolog 3, putative, expressed K08818: cell division cycle 2-like
10 Sobic.002G242100 expressed protein -
11 Sobic.001G194401 - -
12 Sobic.001G339000 terpene synthase, N-terminal domain containing protein, expressed -
13 Sobic.003G085750 - -
14 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.006G184700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.007G195201 - K13947: auxin efflux carrier family protein
17 Sobic.003G383400 ZOS1-19 - C2H2 zinc finger protein, expressed -
18 Sobic.002G215866 - -
19 Sobic.003G043550 - -
20 Sobic.006G063100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins


Gene co-expression network
sample Sobic007G149400 Sobic007G149400 Sobic010G234100 Sobic010G234100 Sobic007G149400--Sobic010G234100 Sobic003G427400 Sobic003G427400 Sobic007G149400--Sobic003G427400 Sobic003G314200 Sobic003G314200 Sobic007G149400--Sobic003G314200 Sobic007G122866 Sobic007G122866 Sobic007G149400--Sobic007G122866 Sobic001G206600 Sobic001G206600 Sobic007G149400--Sobic001G206600 Sobic006G205800 Sobic006G205800 Sobic007G149400--Sobic006G205800 Sobic001G052500 Sobic001G052500 Sobic007G149400--Sobic001G052500 Sobic004G195500 Sobic004G195500 Sobic007G149400--Sobic004G195500 Sobic001G060600 Sobic001G060600 Sobic007G149400--Sobic001G060600 Sobic010G234100--Sobic001G060600 Sobic009G158200 Sobic009G158200 Sobic010G234100--Sobic009G158200 Sobic001G512100 Sobic001G512100 Sobic010G234100--Sobic001G512100 Sobic001G339000 Sobic001G339000 Sobic010G234100--Sobic001G339000 Sobic010G234100--Sobic006G205800 Sobic002G215866 Sobic002G215866 Sobic010G234100--Sobic002G215866 Sobic004G279900 Sobic004G279900 Sobic010G234100--Sobic004G279900 Sobic003G079466 Sobic003G079466 Sobic010G234100--Sobic003G079466 Sobic010G234100--Sobic007G149400 Sobic006G163033 Sobic006G163033 Sobic003G427400--Sobic006G163033 Sobic003G076100 Sobic003G076100 Sobic003G427400--Sobic003G076100 Sobic003G427400--Sobic001G052500 Sobic003G427400--Sobic007G122866 Sobic004G271100 Sobic004G271100 Sobic003G427400--Sobic004G271100 Sobic001G349300 Sobic001G349300 Sobic003G427400--Sobic001G349300 Sobic003G427400--Sobic006G205800 Sobic003G427400--Sobic003G314200 Sobic004G338200 Sobic004G338200 Sobic003G427400--Sobic004G338200 Sobic008G040800 Sobic008G040800 Sobic003G314200--Sobic008G040800 Sobic003G314200--Sobic006G205800 Sobic006G094800 Sobic006G094800 Sobic003G314200--Sobic006G094800 Sobic001G148000 Sobic001G148000 Sobic003G314200--Sobic001G148000 Sobic003G226600 Sobic003G226600 Sobic003G314200--Sobic003G226600 Sobic009G027200 Sobic009G027200 Sobic003G314200--Sobic009G027200 Sobic001G207301 Sobic001G207301 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic003G314200--Sobic004G338200 Sobic007G122866--Sobic001G052500 Sobic007G122866--Sobic003G076100 Sobic003G043550 Sobic003G043550 Sobic007G122866--Sobic003G043550 Sobic007G122866--Sobic004G279900 Sobic007G122866--Sobic006G163033 Sobic001G194401 Sobic001G194401 Sobic007G122866--Sobic001G194401 Sobic003G277850 Sobic003G277850 Sobic007G122866--Sobic003G277850 Sobic006G253700 Sobic006G253700 Sobic007G122866--Sobic006G253700 Sobic007G122866--Sobic004G195500 Sobic005G013400 Sobic005G013400 Sobic001G206600--Sobic005G013400 Sobic009G123733 Sobic009G123733 Sobic001G206600--Sobic009G123733 Sobic001G026950 Sobic001G026950 Sobic001G206600--Sobic001G026950 Sobic004G251800 Sobic004G251800 Sobic001G206600--Sobic004G251800 Sobic003G370600 Sobic003G370600 Sobic001G206600--Sobic003G370600 Sobic001G143100 Sobic001G143100 Sobic001G206600--Sobic001G143100 Sobic005G013500 Sobic005G013500 Sobic001G206600--Sobic005G013500 Sobic006G170000 Sobic006G170000 Sobic001G206600--Sobic006G170000 Sobic002G250900 Sobic002G250900 Sobic001G206600--Sobic002G250900 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic001G097800 Sobic001G097800 Sobic006G205800--Sobic001G097800 Sobic006G205800--Sobic006G094800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic006G205800--Sobic002G215866 Sobic001G052500--Sobic007G122866 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic010G072200 Sobic010G072200 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic004G195500--Sobic007G122866 Sobic003G269000 Sobic003G269000 Sobic004G195500--Sobic003G269000 Sobic004G195500--Sobic001G206600 Sobic003G073380 Sobic003G073380 Sobic004G195500--Sobic003G073380 Sobic007G148500 Sobic007G148500 Sobic004G195500--Sobic007G148500 Sobic009G205500 Sobic009G205500 Sobic004G195500--Sobic009G205500 Sobic004G195500--Sobic003G043550 Sobic002G012400 Sobic002G012400 Sobic004G195500--Sobic002G012400 Sobic003G299100 Sobic003G299100 Sobic004G195500--Sobic003G299100 Sobic006G242701 Sobic006G242701 Sobic001G060600--Sobic006G242701 Sobic004G185300 Sobic004G185300 Sobic001G060600--Sobic004G185300 Sobic005G049100 Sobic005G049100 Sobic001G060600--Sobic005G049100 Sobic001G060600--Sobic009G158200 Sobic003G406180 Sobic003G406180 Sobic001G060600--Sobic003G406180 Sobic004G358800 Sobic004G358800 Sobic001G060600--Sobic004G358800 Sobic001G042100 Sobic001G042100 Sobic001G060600--Sobic001G042100 Sobic007G050750 Sobic007G050750 Sobic001G060600--Sobic007G050750 Sobic001G060600--Sobic010G234100
Octagon: transcription factors


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