Gene annotation
Transcriptome id Sobic.006G184700.1
Synonym Sb06g025890, SbERF71, ethylene response factor 71
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5YE47
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G36450 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g45420.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010156 , Zm00025a035855 , Zm00025a022970 , Zm00025a010312 , Zm00025a056875
Brachypodium -
Barley HORVU3Hr1G026950.1 , HORVU2Hr1G094810.1 , HORVU6Hr1G065430.1 , HORVU6Hr1G065430.2 , HORVU6Hr1G065430.3 , HORVU2Hr1G097850.6 , HORVU2Hr1G097850.5 , HORVU2Hr1G097850.4 , HORVU2Hr1G097850.3 , HORVU2Hr1G097850.1 , HORVU3Hr1G086870.2 , HORVU3Hr1G086870.1 , HORVU5Hr1G094730.1
Wheat TraesCS6D02G237800 , TraesCS6B02G268700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G248201 - -
2 Sobic.003G427400 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
3 Sobic.004G051166 - -
4 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
5 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.001G020900 heat shock protein DnaJ, putative, expressed -
7 Sobic.007G057100 expressed protein -
8 Sobic.001G489600 expressed protein -
9 Sobic.001G194401 - -
10 Sobic.001G153700 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.001G444700 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
13 Sobic.007G223200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
14 Sobic.010G234100 - -
15 Sobic.002G248100 expressed protein -
16 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
18 Sobic.006G205600 glycosyl hydrolases family 16, putative, expressed -
19 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
20 Sobic.004G278300 DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G184700 Sobic006G184700 Sobic002G248201 Sobic002G248201 Sobic006G184700--Sobic002G248201 Sobic003G427400 Sobic003G427400 Sobic006G184700--Sobic003G427400 Sobic004G051166 Sobic004G051166 Sobic006G184700--Sobic004G051166 Sobic001G051600 Sobic001G051600 Sobic006G184700--Sobic001G051600 Sobic009G258300 Sobic009G258300 Sobic006G184700--Sobic009G258300 Sobic001G020900 Sobic001G020900 Sobic006G184700--Sobic001G020900 Sobic007G057100 Sobic007G057100 Sobic006G184700--Sobic007G057100 Sobic001G489600 Sobic001G489600 Sobic006G184700--Sobic001G489600 Sobic001G194401 Sobic001G194401 Sobic006G184700--Sobic001G194401 Sobic006G190500 Sobic006G190500 Sobic002G248201--Sobic006G190500 Sobic008G050500 Sobic008G050500 Sobic002G248201--Sobic008G050500 Sobic001G430600 Sobic001G430600 Sobic002G248201--Sobic001G430600 Sobic006G190100 Sobic006G190100 Sobic002G248201--Sobic006G190100 Sobic006G253700 Sobic006G253700 Sobic002G248201--Sobic006G253700 Sobic009G111200 Sobic009G111200 Sobic002G248201--Sobic009G111200 Sobic007G213800 Sobic007G213800 Sobic002G248201--Sobic007G213800 Sobic004G286600 Sobic004G286600 Sobic002G248201--Sobic004G286600 Sobic003G313800 Sobic003G313800 Sobic002G248201--Sobic003G313800 Sobic006G163033 Sobic006G163033 Sobic003G427400--Sobic006G163033 Sobic003G076100 Sobic003G076100 Sobic003G427400--Sobic003G076100 Sobic001G052500 Sobic001G052500 Sobic003G427400--Sobic001G052500 Sobic007G122866 Sobic007G122866 Sobic003G427400--Sobic007G122866 Sobic004G271100 Sobic004G271100 Sobic003G427400--Sobic004G271100 Sobic001G349300 Sobic001G349300 Sobic003G427400--Sobic001G349300 Sobic006G205800 Sobic006G205800 Sobic003G427400--Sobic006G205800 Sobic003G314200 Sobic003G314200 Sobic003G427400--Sobic003G314200 Sobic004G338200 Sobic004G338200 Sobic003G427400--Sobic004G338200 Sobic004G051166--Sobic001G051600 Sobic001G482700 Sobic001G482700 Sobic004G051166--Sobic001G482700 Sobic001G473900 Sobic001G473900 Sobic004G051166--Sobic001G473900 Sobic001G476400 Sobic001G476400 Sobic004G051166--Sobic001G476400 Sobic004G051166--Sobic007G057100 Sobic006G095600 Sobic006G095600 Sobic004G051166--Sobic006G095600 Sobic004G051166--Sobic001G489600 Sobic004G280900 Sobic004G280900 Sobic004G051166--Sobic004G280900 Sobic010G076600 Sobic010G076600 Sobic004G051166--Sobic010G076600 Sobic001G051600--Sobic001G489600 Sobic001G051600--Sobic001G476400 Sobic001G051600--Sobic006G095600 Sobic002G203000 Sobic002G203000 Sobic001G051600--Sobic002G203000 Sobic001G051600--Sobic007G057100 Sobic001G051600--Sobic004G051166 Sobic008G159100 Sobic008G159100 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000 Sobic009G258300--Sobic002G203000 Sobic003G293600 Sobic003G293600 Sobic009G258300--Sobic003G293600 Sobic004G283300 Sobic004G283300 Sobic009G258300--Sobic004G283300 Sobic010G076700 Sobic010G076700 Sobic009G258300--Sobic010G076700 Sobic004G278200 Sobic004G278200 Sobic009G258300--Sobic004G278200 Sobic001G063600 Sobic001G063600 Sobic009G258300--Sobic001G063600 Sobic009G170100 Sobic009G170100 Sobic009G258300--Sobic009G170100 Sobic009G258300--Sobic001G051600 Sobic009G258300--Sobic007G057100 Sobic002G363466 Sobic002G363466 Sobic001G020900--Sobic002G363466 Sobic003G252750 Sobic003G252750 Sobic001G020900--Sobic003G252750 Sobic002G417101 Sobic002G417101 Sobic001G020900--Sobic002G417101 Sobic004G121500 Sobic004G121500 Sobic001G020900--Sobic004G121500 Sobic003G095301 Sobic003G095301 Sobic001G020900--Sobic003G095301 Sobic002G175000 Sobic002G175000 Sobic001G020900--Sobic002G175000 Sobic006G209200 Sobic006G209200 Sobic001G020900--Sobic006G209200 Sobic010G059100 Sobic010G059100 Sobic001G020900--Sobic010G059100 Sobic005G068600 Sobic005G068600 Sobic001G020900--Sobic005G068600 Sobic007G057100--Sobic001G489600 Sobic007G057100--Sobic002G203000 Sobic001G513700 Sobic001G513700 Sobic007G057100--Sobic001G513700 Sobic007G057100--Sobic006G095600 Sobic007G057100--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic007G057100--Sobic001G077700 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic007G057100--Sobic001G473900 Sobic001G489600--Sobic001G051600 Sobic001G489600--Sobic006G095600 Sobic001G489600--Sobic001G077700 Sobic001G489600--Sobic002G203000 Sobic001G489600--Sobic007G057100 Sobic001G489600--Sobic004G280900 Sobic001G489600--Sobic001G476400 Sobic009G071800 Sobic009G071800 Sobic001G489600--Sobic009G071800 Sobic001G489600--Sobic004G286600 Sobic001G194401--Sobic007G122866 Sobic001G194401--Sobic001G052500 Sobic002G117300 Sobic002G117300 Sobic001G194401--Sobic002G117300 Sobic002G242100 Sobic002G242100 Sobic001G194401--Sobic002G242100 Sobic001G185450 Sobic001G185450 Sobic001G194401--Sobic001G185450 Sobic004G195500 Sobic004G195500 Sobic001G194401--Sobic004G195500 Sobic001G194401--Sobic003G076100 Sobic007G074200 Sobic007G074200 Sobic001G194401--Sobic007G074200 Sobic002G192000 Sobic002G192000 Sobic001G194401--Sobic002G192000
Octagon: transcription factors


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