Gene annotation
Transcriptome id Sobic.001G444700.1
Synonym Sb01g041790
Functional annotation peroxidase precursor, putative, expressed
UniProt C5WRN7
Pfam PF00141
Panther DB PTHR31388 PTHR31388:SF15
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT5G06730 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os03g13180.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018007 , Zm00025a036435 , Zm00025a025891 , Zm00025a001459 , Zm00025a000294 , Zm00025a024245
Brachypodium KQK03746 , KQK03846 , KQK03745 , KQK07348 , KQK22706 , KQJ97885 , KQK14648 , KQJ95997 , KQK23930 , KQK14656
Barley HORVU1Hr1G020690.4 , HORVU1Hr1G020690.5 , HORVU1Hr1G020690.1 , HORVU1Hr1G020690.2 , HORVU1Hr1G020690.3 , HORVU4Hr1G084910.1 , HORVU4Hr1G084910.2 , HORVU4Hr1G084910.3 , HORVU4Hr1G022270.8 , HORVU4Hr1G022270.5 , HORVU4Hr1G022270.4 , HORVU4Hr1G022270.7 , HORVU4Hr1G022270.1 , HORVU4Hr1G022270.2 , HORVU3Hr1G112350.1 , HORVU3Hr1G112350.2 , HORVU2Hr1G064330.1 , HORVU1Hr1G023750.1 , HORVU1Hr1G023750.2 , HORVU3Hr1G111980.1 , HORVU7Hr1G098110.8 , HORVU7Hr1G098110.6 , HORVU7Hr1G098110.7 , HORVU7Hr1G098110.5 , HORVU7Hr1G098110.2 , HORVU7Hr1G098110.1 , HORVU3Hr1G112000.1 , HORVU7Hr1G098110.4 , HORVU7Hr1G098110.3 , HORVU7Hr1G083550.6 , HORVU7Hr1G083550.7 , HORVU7Hr1G083550.4 , HORVU7Hr1G083550.5 , HORVU7Hr1G083550.2 , HORVU7Hr1G083550.3 , HORVU4Hr1G065000.2 , HORVU4Hr1G065000.1
Wheat TraesCS4D02G342500 , TraesCS7B02G023300 , TraesCS7A02G424100 , TraesCS1D02G110600 , TraesCS4D02G234200 , TraesCS7A02G339600 , TraesCS7A02G094400 , TraesCS2D02G265000 , TraesCS5A02G323200 , TraesCS5D02G330300 , TraesCS6D02G054600 , TraesCS6B02G063400 , TraesCS1D02G203700 , TraesCS7D02G253200 , TraesCS4A02G076900 , TraesCS7D02G347300 , TraesCS7D02G417400 , TraesCS1B02G214900 , TraesCS3D02G516900 , TraesCS7B02G325800 , TraesCS4B02G347600 , TraesCS4B02G347600 , TraesCS7B02G150800 , TraesCS7B02G150800 , TraesCS5A02G516200 , TraesCS5B02G323700 , TraesCS2B02G284800 , TraesCS3B02G577900 , TraesCS4B02G233000 , TraesCS7A02G254700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G000500 exo70 exocyst complex subunit domain containing protein, expressed -
2 Sobic.001G424200 protein kinase, putative, expressed -
3 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
4 Sobic.004G053200 Cupin domain containing protein, expressed -
5 Sobic.004G264500 DUF617 domain containing protein, expressed -
6 Sobic.007G057100 expressed protein -
7 Sobic.003G300800 GA inactivating enzyme(PubMedID : 24151305)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-regulation in phyB-1 mutant(PubMedID : 26893475)@Expressed in older stem(PubMedID : 28649278)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
8 Sobic.004G147900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
11 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.007G057500 - -
13 Sobic.004G245850 - -
14 Sobic.001G203200 E2F-related protein, putative, expressed -
15 Sobic.001G235800 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
17 Sobic.003G293600 -(PubMedID : 34525227)@beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
18 Sobic.006G194100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
19 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
20 Sobic.001G153700 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic001G444700 Sobic001G444700 Sobic008G000500 Sobic008G000500 Sobic001G444700--Sobic008G000500 Sobic001G424200 Sobic001G424200 Sobic001G444700--Sobic001G424200 Sobic008G159100 Sobic008G159100 Sobic001G444700--Sobic008G159100 Sobic004G053200 Sobic004G053200 Sobic001G444700--Sobic004G053200 Sobic004G264500 Sobic004G264500 Sobic001G444700--Sobic004G264500 Sobic007G057100 Sobic007G057100 Sobic001G444700--Sobic007G057100 Sobic003G300800 Sobic003G300800 Sobic001G444700--Sobic003G300800 Sobic004G147900 Sobic004G147900 Sobic001G444700--Sobic004G147900 Sobic002G337800 Sobic002G337800 Sobic001G444700--Sobic002G337800 Sobic008G000500--Sobic008G159100 Sobic008G000500--Sobic004G264500 Sobic005G231700 Sobic005G231700 Sobic008G000500--Sobic005G231700 Sobic008G000500--Sobic002G337800 Sobic001G235800 Sobic001G235800 Sobic008G000500--Sobic001G235800 Sobic008G000500--Sobic001G444700 Sobic001G080300 Sobic001G080300 Sobic008G000500--Sobic001G080300 Sobic002G325900 Sobic002G325900 Sobic008G000500--Sobic002G325900 Sobic004G245850 Sobic004G245850 Sobic008G000500--Sobic004G245850 Sobic003G094200 Sobic003G094200 Sobic001G424200--Sobic003G094200 Sobic006G231332 Sobic006G231332 Sobic001G424200--Sobic006G231332 Sobic001G424200--Sobic003G300800 Sobic010G178500 Sobic010G178500 Sobic001G424200--Sobic010G178500 Sobic002G294700 Sobic002G294700 Sobic001G424200--Sobic002G294700 Sobic004G249900 Sobic004G249900 Sobic001G424200--Sobic004G249900 Sobic004G048100 Sobic004G048100 Sobic001G424200--Sobic004G048100 Sobic008G177800 Sobic008G177800 Sobic001G424200--Sobic008G177800 Sobic004G036600 Sobic004G036600 Sobic001G424200--Sobic004G036600 Sobic001G063600 Sobic001G063600 Sobic008G159100--Sobic001G063600 Sobic002G427400 Sobic002G427400 Sobic008G159100--Sobic002G427400 Sobic008G159100--Sobic008G000500 Sobic001G051600 Sobic001G051600 Sobic008G159100--Sobic001G051600 Sobic001G476400 Sobic001G476400 Sobic008G159100--Sobic001G476400 Sobic008G159100--Sobic004G264500 Sobic008G159100--Sobic005G231700 Sobic008G159100--Sobic004G245850 Sobic008G159100--Sobic001G080300 Sobic001G189700 Sobic001G189700 Sobic004G053200--Sobic001G189700 Sobic001G290400 Sobic001G290400 Sobic004G053200--Sobic001G290400 Sobic004G280800 Sobic004G280800 Sobic004G053200--Sobic004G280800 Sobic003G338900 Sobic003G338900 Sobic004G053200--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic004G053200--Sobic001G473900 Sobic004G025000 Sobic004G025000 Sobic004G053200--Sobic004G025000 Sobic004G053200--Sobic001G476400 Sobic001G081600 Sobic001G081600 Sobic004G053200--Sobic001G081600 Sobic006G095600 Sobic006G095600 Sobic004G053200--Sobic006G095600 Sobic004G264500--Sobic008G159100 Sobic004G264500--Sobic008G000500 Sobic004G264500--Sobic005G231700 Sobic003G293600 Sobic003G293600 Sobic004G264500--Sobic003G293600 Sobic007G166900 Sobic007G166900 Sobic004G264500--Sobic007G166900 Sobic004G264500--Sobic007G057100 Sobic004G264500--Sobic001G051600 Sobic004G264500--Sobic002G427400 Sobic004G264500--Sobic004G245850 Sobic001G489600 Sobic001G489600 Sobic007G057100--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic007G057100--Sobic002G203000 Sobic001G513700 Sobic001G513700 Sobic007G057100--Sobic001G513700 Sobic007G057100--Sobic006G095600 Sobic004G286600 Sobic004G286600 Sobic007G057100--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic007G057100--Sobic001G077700 Sobic007G057100--Sobic001G051600 Sobic007G057100--Sobic004G147900 Sobic007G057100--Sobic001G473900 Sobic006G179500 Sobic006G179500 Sobic003G300800--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic003G300800--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic003G300800--Sobic002G359300 Sobic006G183400 Sobic006G183400 Sobic003G300800--Sobic006G183400 Sobic009G036100 Sobic009G036100 Sobic003G300800--Sobic009G036100 Sobic003G300800--Sobic008G177800 Sobic001G040200 Sobic001G040200 Sobic003G300800--Sobic001G040200 Sobic003G300800--Sobic010G178500 Sobic003G300800--Sobic002G294700 Sobic004G147900--Sobic007G057100 Sobic003G035700 Sobic003G035700 Sobic004G147900--Sobic003G035700 Sobic004G147900--Sobic001G290400 Sobic009G155200 Sobic009G155200 Sobic004G147900--Sobic009G155200 Sobic003G423500 Sobic003G423500 Sobic004G147900--Sobic003G423500 Sobic004G051166 Sobic004G051166 Sobic004G147900--Sobic004G051166 Sobic003G158500 Sobic003G158500 Sobic004G147900--Sobic003G158500 Sobic004G147900--Sobic001G513700 Sobic007G171000 Sobic007G171000 Sobic004G147900--Sobic007G171000 Sobic002G337800--Sobic005G231700 Sobic002G337800--Sobic008G159100 Sobic006G087900 Sobic006G087900 Sobic002G337800--Sobic006G087900 Sobic002G337800--Sobic001G063600 Sobic002G337800--Sobic007G057100 Sobic001G051800 Sobic001G051800 Sobic002G337800--Sobic001G051800 Sobic002G210300 Sobic002G210300 Sobic002G337800--Sobic002G210300 Sobic002G337800--Sobic008G000500 Sobic005G121200 Sobic005G121200 Sobic002G337800--Sobic005G121200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.