Gene annotation
Transcriptome id Sobic.004G264500.1
Synonym Sb04g030260
Functional annotation DUF617 domain containing protein, expressed
UniProt C5Y088
Pfam PF04759
Panther DB PTHR31696 PTHR31696:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25640 : Protein of unknown function, DUF617
RAP-DB (Rice) LOC_Os02g47980.1 : DUF617 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032485
Brachypodium KQK00973
Barley HORVU6Hr1G069440.1 , HORVU6Hr1G069440.3 , HORVU6Hr1G069440.2 , HORVU6Hr1G069440.5 , HORVU6Hr1G069440.4 , HORVU6Hr1G069440.6
Wheat TraesCS6B02G303000 , TraesCS6A02G275600 , TraesCS6D02G255900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
2 Sobic.008G000500 exo70 exocyst complex subunit domain containing protein, expressed -
3 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
4 Sobic.003G293600 -(PubMedID : 34525227)@beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
5 Sobic.007G166900 auxin-induced protein 5NG4, putative, expressed -
6 Sobic.007G057100 expressed protein -
7 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
8 Sobic.002G427400 COBRA-like protein 7 precursor, putative, expressed -
9 Sobic.004G245850 - -
10 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
11 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.001G080300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.001G444700 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G194100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
17 Sobic.001G476400 - -
18 Sobic.004G257300 GPI-anchored protein, putative, expressed -
19 Sobic.010G080400 AP2 domain containing protein, expressed -
20 Sobic.004G278200 DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G264500 Sobic004G264500 Sobic008G159100 Sobic008G159100 Sobic004G264500--Sobic008G159100 Sobic008G000500 Sobic008G000500 Sobic004G264500--Sobic008G000500 Sobic005G231700 Sobic005G231700 Sobic004G264500--Sobic005G231700 Sobic003G293600 Sobic003G293600 Sobic004G264500--Sobic003G293600 Sobic007G166900 Sobic007G166900 Sobic004G264500--Sobic007G166900 Sobic007G057100 Sobic007G057100 Sobic004G264500--Sobic007G057100 Sobic001G051600 Sobic001G051600 Sobic004G264500--Sobic001G051600 Sobic002G427400 Sobic002G427400 Sobic004G264500--Sobic002G427400 Sobic004G245850 Sobic004G245850 Sobic004G264500--Sobic004G245850 Sobic001G063600 Sobic001G063600 Sobic008G159100--Sobic001G063600 Sobic008G159100--Sobic002G427400 Sobic008G159100--Sobic008G000500 Sobic008G159100--Sobic001G051600 Sobic001G476400 Sobic001G476400 Sobic008G159100--Sobic001G476400 Sobic008G159100--Sobic004G264500 Sobic008G159100--Sobic005G231700 Sobic008G159100--Sobic004G245850 Sobic001G080300 Sobic001G080300 Sobic008G159100--Sobic001G080300 Sobic008G000500--Sobic008G159100 Sobic008G000500--Sobic004G264500 Sobic008G000500--Sobic005G231700 Sobic002G337800 Sobic002G337800 Sobic008G000500--Sobic002G337800 Sobic001G235800 Sobic001G235800 Sobic008G000500--Sobic001G235800 Sobic001G444700 Sobic001G444700 Sobic008G000500--Sobic001G444700 Sobic008G000500--Sobic001G080300 Sobic002G325900 Sobic002G325900 Sobic008G000500--Sobic002G325900 Sobic008G000500--Sobic004G245850 Sobic006G087900 Sobic006G087900 Sobic005G231700--Sobic006G087900 Sobic005G231700--Sobic001G063600 Sobic005G231700--Sobic002G325900 Sobic003G296700 Sobic003G296700 Sobic005G231700--Sobic003G296700 Sobic010G080400 Sobic010G080400 Sobic005G231700--Sobic010G080400 Sobic009G208800 Sobic009G208800 Sobic005G231700--Sobic009G208800 Sobic005G231700--Sobic008G159100 Sobic005G231700--Sobic002G337800 Sobic004G025000 Sobic004G025000 Sobic005G231700--Sobic004G025000 Sobic009G258300 Sobic009G258300 Sobic003G293600--Sobic009G258300 Sobic004G278200 Sobic004G278200 Sobic003G293600--Sobic004G278200 Sobic003G293600--Sobic007G166900 Sobic006G267900 Sobic006G267900 Sobic003G293600--Sobic006G267900 Sobic010G006700 Sobic010G006700 Sobic003G293600--Sobic010G006700 Sobic003G293600--Sobic002G427400 Sobic001G125100 Sobic001G125100 Sobic003G293600--Sobic001G125100 Sobic003G373150 Sobic003G373150 Sobic003G293600--Sobic003G373150 Sobic004G321000 Sobic004G321000 Sobic003G293600--Sobic004G321000 Sobic007G166900--Sobic010G006700 Sobic007G166900--Sobic002G427400 Sobic004G331300 Sobic004G331300 Sobic007G166900--Sobic004G331300 Sobic007G166900--Sobic003G373150 Sobic004G310600 Sobic004G310600 Sobic007G166900--Sobic004G310600 Sobic007G166900--Sobic006G267900 Sobic001G159850 Sobic001G159850 Sobic007G166900--Sobic001G159850 Sobic001G489600 Sobic001G489600 Sobic007G057100--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic007G057100--Sobic002G203000 Sobic001G513700 Sobic001G513700 Sobic007G057100--Sobic001G513700 Sobic006G095600 Sobic006G095600 Sobic007G057100--Sobic006G095600 Sobic004G286600 Sobic004G286600 Sobic007G057100--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic007G057100--Sobic001G077700 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic001G473900 Sobic001G473900 Sobic007G057100--Sobic001G473900 Sobic001G051600--Sobic001G489600 Sobic001G051600--Sobic001G476400 Sobic001G051600--Sobic006G095600 Sobic001G051600--Sobic002G203000 Sobic001G051600--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic001G051600--Sobic004G051166 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic001G051600--Sobic004G025000 Sobic002G427400--Sobic007G166900 Sobic002G427400--Sobic001G080300 Sobic002G427400--Sobic008G159100 Sobic002G427400--Sobic004G278200 Sobic002G427400--Sobic003G373150 Sobic002G427400--Sobic010G006700 Sobic003G225900 Sobic003G225900 Sobic002G427400--Sobic003G225900 Sobic003G032900 Sobic003G032900 Sobic002G427400--Sobic003G032900 Sobic002G427400--Sobic006G267900 Sobic006G184800 Sobic006G184800 Sobic004G245850--Sobic006G184800 Sobic009G163900 Sobic009G163900 Sobic004G245850--Sobic009G163900 Sobic006G055600 Sobic006G055600 Sobic004G245850--Sobic006G055600 Sobic004G245850--Sobic008G159100 Sobic001G093200 Sobic001G093200 Sobic004G245850--Sobic001G093200 Sobic004G283201 Sobic004G283201 Sobic004G245850--Sobic004G283201 Sobic004G245850--Sobic002G427400 Sobic001G092600 Sobic001G092600 Sobic004G245850--Sobic001G092600 Sobic004G245850--Sobic004G278200
Octagon: transcription factors


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