Gene annotation
Transcriptome id Sobic.007G211300.6,Sobic.007G211300.5,Sobic.007G211300.2,Sobic.007G211300.7,Sobic.007G211300.4
Synonym Sb07g027850
Functional annotation OTU-like cysteine protease family protein, putative, expressed
UniProt C5YIT5 , A0A1Z5RBX3 , A0A1Z5RAZ7
Pfam PF02338
Panther DB PTHR12419 PTHR12419:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57810 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os08g39560.1 : OTU-like cysteine protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005085
Brachypodium KQJ98906 , KQJ98907 , KQJ98905 , KQJ98908
Barley HORVU5Hr1G107000.9 , HORVU5Hr1G107000.4 , HORVU5Hr1G107000.6 , HORVU5Hr1G107000.1 , HORVU5Hr1G107000.3 , HORVU5Hr1G107000.2 , HORVU5Hr1G107000.20 , HORVU5Hr1G107000.18 , HORVU5Hr1G107000.11 , HORVU5Hr1G107000.10 , HORVU5Hr1G107000.13 , HORVU5Hr1G107000.12 , HORVU5Hr1G107000.17 , HORVU5Hr1G107000.16 , HORVU5Hr1G107000.15 , HORVU5Hr1G107000.14
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G211300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G039200 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
2 Sobic.010G033300 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
3 Sobic.003G143900 kelch motif family protein, putative, expressed -
4 Sobic.001G395200 cyclin-related protein, putative, expressed -
5 Sobic.006G081500 receptor-like kinase, putative, expressed -
6 Sobic.010G257000 two-component response regulator, putative, expressed -
7 Sobic.005G013300 vacuolar-sorting receptor precursor, putative, expressed -
8 Sobic.001G315400 expressed protein -
9 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
10 Sobic.001G064600 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.010G222900 expressed protein -
12 Sobic.001G194600 Trihelix Family(PubMedID : 24864043)@expressed protein -
13 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.002G257900 Highest expression level in primordial inflorescence(PubMedID : 27501690)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659857)@OsSPL18 - SBP-box gene family member, expressed -
15 Sobic.009G259900 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
16 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
17 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
18 Sobic.010G135300 expressed protein -
19 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.005G047300 OsFBT13 - F-box and tubby domain containing protein, expressed -


Gene co-expression network
sample Sobic007G211300 Sobic007G211300 Sobic002G039200 Sobic002G039200 Sobic007G211300--Sobic002G039200 Sobic010G033300 Sobic010G033300 Sobic007G211300--Sobic010G033300 Sobic003G143900 Sobic003G143900 Sobic007G211300--Sobic003G143900 Sobic001G395200 Sobic001G395200 Sobic007G211300--Sobic001G395200 Sobic006G081500 Sobic006G081500 Sobic007G211300--Sobic006G081500 Sobic010G257000 Sobic010G257000 Sobic007G211300--Sobic010G257000 Sobic005G013300 Sobic005G013300 Sobic007G211300--Sobic005G013300 Sobic001G315400 Sobic001G315400 Sobic007G211300--Sobic001G315400 Sobic001G034500 Sobic001G034500 Sobic007G211300--Sobic001G034500 Sobic009G082600 Sobic009G082600 Sobic002G039200--Sobic009G082600 Sobic001G088900 Sobic001G088900 Sobic002G039200--Sobic001G088900 Sobic002G327000 Sobic002G327000 Sobic002G039200--Sobic002G327000 Sobic004G305400 Sobic004G305400 Sobic002G039200--Sobic004G305400 Sobic008G013300 Sobic008G013300 Sobic002G039200--Sobic008G013300 Sobic002G039200--Sobic001G034500 Sobic006G137700 Sobic006G137700 Sobic002G039200--Sobic006G137700 Sobic010G186500 Sobic010G186500 Sobic002G039200--Sobic010G186500 Sobic008G015200 Sobic008G015200 Sobic002G039200--Sobic008G015200 Sobic010G033300--Sobic009G082600 Sobic010G150200 Sobic010G150200 Sobic010G033300--Sobic010G150200 Sobic010G033300--Sobic007G211300 Sobic003G223900 Sobic003G223900 Sobic010G033300--Sobic003G223900 Sobic002G257900 Sobic002G257900 Sobic010G033300--Sobic002G257900 Sobic001G119700 Sobic001G119700 Sobic010G033300--Sobic001G119700 Sobic004G234300 Sobic004G234300 Sobic010G033300--Sobic004G234300 Sobic003G410700 Sobic003G410700 Sobic010G033300--Sobic003G410700 Sobic002G267800 Sobic002G267800 Sobic010G033300--Sobic002G267800 Sobic005G034100 Sobic005G034100 Sobic003G143900--Sobic005G034100 Sobic001G494100 Sobic001G494100 Sobic003G143900--Sobic001G494100 Sobic004G234500 Sobic004G234500 Sobic003G143900--Sobic004G234500 Sobic003G006900 Sobic003G006900 Sobic003G143900--Sobic003G006900 Sobic006G046600 Sobic006G046600 Sobic003G143900--Sobic006G046600 Sobic003G362300 Sobic003G362300 Sobic003G143900--Sobic003G362300 Sobic003G027800 Sobic003G027800 Sobic003G143900--Sobic003G027800 Sobic003G143900--Sobic003G410700 Sobic003G100700 Sobic003G100700 Sobic003G143900--Sobic003G100700 Sobic003G104100 Sobic003G104100 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900 Sobic001G372900 Sobic001G372900 Sobic006G081500--Sobic001G372900 Sobic001G296100 Sobic001G296100 Sobic006G081500--Sobic001G296100 Sobic001G499200 Sobic001G499200 Sobic006G081500--Sobic001G499200 Sobic006G081500--Sobic003G351900 Sobic001G540700 Sobic001G540700 Sobic006G081500--Sobic001G540700 Sobic003G283600 Sobic003G283600 Sobic006G081500--Sobic003G283600 Sobic006G022400 Sobic006G022400 Sobic006G081500--Sobic006G022400 Sobic006G142500 Sobic006G142500 Sobic006G081500--Sobic006G142500 Sobic003G153900 Sobic003G153900 Sobic006G081500--Sobic003G153900 Sobic009G188900 Sobic009G188900 Sobic010G257000--Sobic009G188900 Sobic010G175000 Sobic010G175000 Sobic010G257000--Sobic010G175000 Sobic002G168000 Sobic002G168000 Sobic010G257000--Sobic002G168000 Sobic009G224300 Sobic009G224300 Sobic010G257000--Sobic009G224300 Sobic001G027500 Sobic001G027500 Sobic010G257000--Sobic001G027500 Sobic008G048966 Sobic008G048966 Sobic010G257000--Sobic008G048966 Sobic006G281900 Sobic006G281900 Sobic010G257000--Sobic006G281900 Sobic010G250400 Sobic010G250400 Sobic010G257000--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic010G257000--Sobic006G016700 Sobic009G254000 Sobic009G254000 Sobic005G013300--Sobic009G254000 Sobic002G006100 Sobic002G006100 Sobic005G013300--Sobic002G006100 Sobic001G425700 Sobic001G425700 Sobic005G013300--Sobic001G425700 Sobic005G013300--Sobic001G395200 Sobic004G207000 Sobic004G207000 Sobic005G013300--Sobic004G207000 Sobic005G013300--Sobic001G540700 Sobic003G298900 Sobic003G298900 Sobic005G013300--Sobic003G298900 Sobic009G257500 Sobic009G257500 Sobic005G013300--Sobic009G257500 Sobic009G167100 Sobic009G167100 Sobic005G013300--Sobic009G167100 Sobic001G367100 Sobic001G367100 Sobic001G315400--Sobic001G367100 Sobic003G077500 Sobic003G077500 Sobic001G315400--Sobic003G077500 Sobic002G079100 Sobic002G079100 Sobic001G315400--Sobic002G079100 Sobic002G002100 Sobic002G002100 Sobic001G315400--Sobic002G002100 Sobic005G047300 Sobic005G047300 Sobic001G315400--Sobic005G047300 Sobic002G223300 Sobic002G223300 Sobic001G315400--Sobic002G223300 Sobic004G128200 Sobic004G128200 Sobic001G315400--Sobic004G128200 Sobic004G227500 Sobic004G227500 Sobic001G315400--Sobic004G227500 Sobic001G315400--Sobic001G395200 Sobic001G477700 Sobic001G477700 Sobic001G034500--Sobic001G477700 Sobic003G284000 Sobic003G284000 Sobic001G034500--Sobic003G284000 Sobic006G154100 Sobic006G154100 Sobic001G034500--Sobic006G154100 Sobic001G004100 Sobic001G004100 Sobic001G034500--Sobic001G004100 Sobic001G135500 Sobic001G135500 Sobic001G034500--Sobic001G135500 Sobic001G413800 Sobic001G413800 Sobic001G034500--Sobic001G413800 Sobic003G212900 Sobic003G212900 Sobic001G034500--Sobic003G212900 Sobic001G097500 Sobic001G097500 Sobic001G034500--Sobic001G097500 Sobic007G042900 Sobic007G042900 Sobic001G034500--Sobic007G042900
Octagon: transcription factors


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