Gene annotation
Transcriptome id Sobic.001G194600.1
Synonym SbTri02, GT2, AT-GT2, Sb01g017120
Functional annotation Trihelix Family (PubMedID : 24864043)
expressed protein
UniProt C5WVE4
Pfam PF13837
Panther DB PTHR21654 PTHR21654:SF9
NCBI CDD KOG4282; Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76890 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os02g43300.1 : expressed protein
MaizeGDB (Corn) Zm00025a017424 , Zm00025a056623 , Zm00025a010385 , Zm00025a020935 , Zm00025a032162 , Zm00025a035087 , Zm00025a006308 , Zm00025a000196 , Zm00025a018641
Brachypodium KQJ83849 , KQK24020 , KQJ97389 , KQJ97388 , PNT67683 , KQJ83854 , KQJ83850 , KQJ83851 , KQJ83852 , KQJ83853 , KQJ97390 , KQJ83848 , PNT69145 , KQJ92790
Barley HORVU6Hr1G061300.10 , HORVU6Hr1G061300.11 , HORVU2Hr1G092650.6 , HORVU2Hr1G092650.7 , HORVU2Hr1G092650.4 , HORVU2Hr1G092650.2 , HORVU2Hr1G092650.3 , HORVU2Hr1G092650.1 , HORVU6Hr1G061300.8 , HORVU6Hr1G061300.9 , HORVU6Hr1G061300.6 , HORVU6Hr1G061300.7 , HORVU6Hr1G061300.4 , HORVU6Hr1G061300.5 , HORVU6Hr1G061300.2 , HORVU6Hr1G061300.3 , HORVU6Hr1G061300.1 , HORVU1Hr1G046940.4 , HORVU1Hr1G046940.5 , HORVU1Hr1G046940.8 , HORVU1Hr1G046940.9 , HORVU1Hr1G046940.6 , HORVU1Hr1G046940.7 , HORVU1Hr1G046940.1 , HORVU1Hr1G046940.2 , HORVU1Hr1G046940.3 , HORVU0Hr1G014900.2 , HORVU0Hr1G014900.3 , HORVU0Hr1G014900.1 , HORVU0Hr1G014900.4 , HORVU2Hr1G092650.5 , HORVU4Hr1G089120.2 , HORVU4Hr1G089120.3 , HORVU4Hr1G089120.1 , HORVU4Hr1G089120.6 , HORVU4Hr1G089120.4
Wheat TraesCS1D02G162400 , TraesCS1D02G162400 , TraesCS6D02G016300 , TraesCS4B02G396900 , TraesCS2A02G389200 , TraesCS2A02G389200 , TraesCS2A02G389200 , TraesCS1A02G176700 , TraesCS1A02G176700 , TraesCS1B02G203300 , TraesCS1B02G203300 , TraesCS6D02G222500 , TraesCS6D02G222500 , TraesCS6D02G222500 , TraesCS6A02G013200 , TraesCS6A02G013200 , TraesCS6B02G284400 , TraesCS6B02G284400 , TraesCS6B02G284400 , TraesCS6B02G020100 , TraesCS2D02G387100 , TraesCS2D02G387100 , TraesCS2D02G387100 , TraesCS2B02G407400 , TraesCS2B02G407400 , TraesCS2B02G407400 , TraesCS2B02G407400 , TraesCS6A02G240200 , TraesCS6A02G240200 , TraesCS5A02G558200 , TraesCSU02G029700
Populus -


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cDNA sequences
Sobic.001G194600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G142200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
2 Sobic.002G039200 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
3 Sobic.003G406600 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659873)@OsSPL2 - SBP-box gene family member, expressed -
4 Sobic.003G009200 expressed protein -
5 Sobic.010G029000 expressed protein -
6 Sobic.005G013300 vacuolar-sorting receptor precursor, putative, expressed -
7 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
8 Sobic.006G081500 receptor-like kinase, putative, expressed -
9 Sobic.005G015300 expressed protein -
10 Sobic.001G358800 protein phosphatase 2C, putative, expressed -
11 Sobic.001G540700 expressed protein -
12 Sobic.002G002100 expressed protein -
13 Sobic.007G197100 expressed protein -
14 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
15 Sobic.004G305400 coronatine-insensitive protein 1, putative, expressed -
16 Sobic.005G021900 expressed protein -
17 Sobic.007G211300 OTU-like cysteine protease family protein, putative, expressed -
18 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
19 Sobic.002G338200 MSP domain containing protein, putative, expressed -
20 Sobic.010G135300 expressed protein -


Gene co-expression network
sample Sobic001G194600 Sobic001G194600 Sobic001G142200 Sobic001G142200 Sobic001G194600--Sobic001G142200 Sobic002G039200 Sobic002G039200 Sobic001G194600--Sobic002G039200 Sobic003G406600 Sobic003G406600 Sobic001G194600--Sobic003G406600 Sobic003G009200 Sobic003G009200 Sobic001G194600--Sobic003G009200 Sobic010G029000 Sobic010G029000 Sobic001G194600--Sobic010G029000 Sobic005G013300 Sobic005G013300 Sobic001G194600--Sobic005G013300 Sobic007G219200 Sobic007G219200 Sobic001G194600--Sobic007G219200 Sobic006G081500 Sobic006G081500 Sobic001G194600--Sobic006G081500 Sobic005G015300 Sobic005G015300 Sobic001G194600--Sobic005G015300 Sobic001G221900 Sobic001G221900 Sobic001G142200--Sobic001G221900 Sobic003G339600 Sobic003G339600 Sobic001G142200--Sobic003G339600 Sobic009G235700 Sobic009G235700 Sobic001G142200--Sobic009G235700 Sobic003G360700 Sobic003G360700 Sobic001G142200--Sobic003G360700 Sobic001G267800 Sobic001G267800 Sobic001G142200--Sobic001G267800 Sobic004G248100 Sobic004G248100 Sobic001G142200--Sobic004G248100 Sobic010G020600 Sobic010G020600 Sobic001G142200--Sobic010G020600 Sobic010G010900 Sobic010G010900 Sobic001G142200--Sobic010G010900 Sobic007G165800 Sobic007G165800 Sobic001G142200--Sobic007G165800 Sobic009G082600 Sobic009G082600 Sobic002G039200--Sobic009G082600 Sobic001G088900 Sobic001G088900 Sobic002G039200--Sobic001G088900 Sobic002G327000 Sobic002G327000 Sobic002G039200--Sobic002G327000 Sobic004G305400 Sobic004G305400 Sobic002G039200--Sobic004G305400 Sobic008G013300 Sobic008G013300 Sobic002G039200--Sobic008G013300 Sobic001G034500 Sobic001G034500 Sobic002G039200--Sobic001G034500 Sobic006G137700 Sobic006G137700 Sobic002G039200--Sobic006G137700 Sobic010G186500 Sobic010G186500 Sobic002G039200--Sobic010G186500 Sobic008G015200 Sobic008G015200 Sobic002G039200--Sobic008G015200 Sobic010G173700 Sobic010G173700 Sobic003G406600--Sobic010G173700 Sobic001G116600 Sobic001G116600 Sobic003G406600--Sobic001G116600 Sobic007G023100 Sobic007G023100 Sobic003G406600--Sobic007G023100 Sobic003G356600 Sobic003G356600 Sobic003G406600--Sobic003G356600 Sobic007G070200 Sobic007G070200 Sobic003G406600--Sobic007G070200 Sobic001G467200 Sobic001G467200 Sobic003G406600--Sobic001G467200 Sobic006G046600 Sobic006G046600 Sobic003G406600--Sobic006G046600 Sobic003G406600--Sobic010G029000 Sobic003G230000 Sobic003G230000 Sobic003G406600--Sobic003G230000 Sobic001G507200 Sobic001G507200 Sobic003G009200--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic003G009200--Sobic009G049200 Sobic003G311500 Sobic003G311500 Sobic003G009200--Sobic003G311500 Sobic004G034300 Sobic004G034300 Sobic003G009200--Sobic004G034300 Sobic010G103500 Sobic010G103500 Sobic003G009200--Sobic010G103500 Sobic007G051400 Sobic007G051400 Sobic003G009200--Sobic007G051400 Sobic002G418100 Sobic002G418100 Sobic003G009200--Sobic002G418100 Sobic004G231200 Sobic004G231200 Sobic003G009200--Sobic004G231200 Sobic008G192700 Sobic008G192700 Sobic003G009200--Sobic008G192700 Sobic003G100700 Sobic003G100700 Sobic010G029000--Sobic003G100700 Sobic006G160200 Sobic006G160200 Sobic010G029000--Sobic006G160200 Sobic001G231200 Sobic001G231200 Sobic010G029000--Sobic001G231200 Sobic010G029000--Sobic001G116600 Sobic004G267600 Sobic004G267600 Sobic010G029000--Sobic004G267600 Sobic003G013000 Sobic003G013000 Sobic010G029000--Sobic003G013000 Sobic001G522300 Sobic001G522300 Sobic010G029000--Sobic001G522300 Sobic001G440900 Sobic001G440900 Sobic010G029000--Sobic001G440900 Sobic001G487200 Sobic001G487200 Sobic010G029000--Sobic001G487200 Sobic009G254000 Sobic009G254000 Sobic005G013300--Sobic009G254000 Sobic002G006100 Sobic002G006100 Sobic005G013300--Sobic002G006100 Sobic001G425700 Sobic001G425700 Sobic005G013300--Sobic001G425700 Sobic001G395200 Sobic001G395200 Sobic005G013300--Sobic001G395200 Sobic004G207000 Sobic004G207000 Sobic005G013300--Sobic004G207000 Sobic001G540700 Sobic001G540700 Sobic005G013300--Sobic001G540700 Sobic003G298900 Sobic003G298900 Sobic005G013300--Sobic003G298900 Sobic009G257500 Sobic009G257500 Sobic005G013300--Sobic009G257500 Sobic009G167100 Sobic009G167100 Sobic005G013300--Sobic009G167100 Sobic002G219900 Sobic002G219900 Sobic007G219200--Sobic002G219900 Sobic001G115500 Sobic001G115500 Sobic007G219200--Sobic001G115500 Sobic003G027800 Sobic003G027800 Sobic007G219200--Sobic003G027800 Sobic004G249300 Sobic004G249300 Sobic007G219200--Sobic004G249300 Sobic003G077500 Sobic003G077500 Sobic007G219200--Sobic003G077500 Sobic008G125000 Sobic008G125000 Sobic007G219200--Sobic008G125000 Sobic001G435201 Sobic001G435201 Sobic007G219200--Sobic001G435201 Sobic001G382400 Sobic001G382400 Sobic007G219200--Sobic001G382400 Sobic002G394800 Sobic002G394800 Sobic007G219200--Sobic002G394800 Sobic001G372900 Sobic001G372900 Sobic006G081500--Sobic001G372900 Sobic001G296100 Sobic001G296100 Sobic006G081500--Sobic001G296100 Sobic001G499200 Sobic001G499200 Sobic006G081500--Sobic001G499200 Sobic003G351900 Sobic003G351900 Sobic006G081500--Sobic003G351900 Sobic006G081500--Sobic001G540700 Sobic003G283600 Sobic003G283600 Sobic006G081500--Sobic003G283600 Sobic006G022400 Sobic006G022400 Sobic006G081500--Sobic006G022400 Sobic006G142500 Sobic006G142500 Sobic006G081500--Sobic006G142500 Sobic003G153900 Sobic003G153900 Sobic006G081500--Sobic003G153900 Sobic002G001100 Sobic002G001100 Sobic005G015300--Sobic002G001100 Sobic005G015300--Sobic003G298900 Sobic005G015300--Sobic001G231200 Sobic004G164700 Sobic004G164700 Sobic005G015300--Sobic004G164700 Sobic002G383100 Sobic002G383100 Sobic005G015300--Sobic002G383100 Sobic005G015300--Sobic003G351900 Sobic007G076200 Sobic007G076200 Sobic005G015300--Sobic007G076200 Sobic002G320600 Sobic002G320600 Sobic005G015300--Sobic002G320600 Sobic003G031700 Sobic003G031700 Sobic005G015300--Sobic003G031700
Octagon: transcription factors


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