Gene annotation
Transcriptome id Sobic.007G218200.6,Sobic.007G218200.3,Sobic.007G218200.5,Sobic.007G218200.4
Synonym AXS2
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt A0A1B6PJ14 , A0A1B6PJ54
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08200 : UDP-D-apiose/UDP-D-xylose synthase 2
RAP-DB (Rice) LOC_Os01g73790.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G218200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G252800 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
2 Sobic.003G198100 - -
3 Sobic.006G182800 heat stress transcription factor B-1, putative, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.003G154800 expressed protein -
5 Sobic.001G349800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Phospholipase dalpha 1(PubMedID : 26320239)@phospholipase D, putative, expressed K01115: phospholipase D1/2
6 Sobic.001G396300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein CP12-2 (Os)(PubMedID : 27208977)@calvin cycle protein CP12, putative, expressed -
7 Sobic.008G088803 - K12183: TSG101, STP22, ESCRT-I complex subunit TSG101
8 Sobic.010G196200 OsSub51 - Putative Subtilisin homologue, expressed -
9 Sobic.004G244500 dynamin, putative, expressed K01528: dynamin 1/3
10 Sobic.004G162600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
11 Sobic.001G351200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ICE-like protease p20 domain containing protein, putative, expressed -
12 Sobic.003G250340 - K07976: Rab family, other
13 Sobic.005G116601 - -
14 Sobic.010G118600 sodium/potassium/calcium exchanger 1, putative, expressed -
15 Sobic.001G186925 - -
16 Sobic.001G139200 - -
17 Sobic.001G003300 ABC-2 type transporter, putative, expressed -
18 Sobic.001G332900 S-locus-like receptor protein kinase, putative, expressed -
19 Sobic.003G046200 ATPase, putative, expressed -
20 Sobic.003G406240 - -


Gene co-expression network
sample Sobic007G218200 Sobic007G218200 Sobic001G252800 Sobic001G252800 Sobic007G218200--Sobic001G252800 Sobic003G198100 Sobic003G198100 Sobic007G218200--Sobic003G198100 Sobic006G182800 Sobic006G182800 Sobic007G218200--Sobic006G182800 Sobic003G154800 Sobic003G154800 Sobic007G218200--Sobic003G154800 Sobic001G349800 Sobic001G349800 Sobic007G218200--Sobic001G349800 Sobic001G396300 Sobic001G396300 Sobic007G218200--Sobic001G396300 Sobic008G088803 Sobic008G088803 Sobic007G218200--Sobic008G088803 Sobic010G196200 Sobic010G196200 Sobic007G218200--Sobic010G196200 Sobic004G244500 Sobic004G244500 Sobic007G218200--Sobic004G244500 Sobic001G252800--Sobic001G396300 Sobic001G252800--Sobic003G198100 Sobic008G095000 Sobic008G095000 Sobic001G252800--Sobic008G095000 Sobic001G186925 Sobic001G186925 Sobic001G252800--Sobic001G186925 Sobic001G252800--Sobic007G218200 Sobic005G195000 Sobic005G195000 Sobic001G252800--Sobic005G195000 Sobic010G236700 Sobic010G236700 Sobic001G252800--Sobic010G236700 Sobic001G252800--Sobic006G182800 Sobic001G435800 Sobic001G435800 Sobic001G252800--Sobic001G435800 Sobic006G166300 Sobic006G166300 Sobic003G198100--Sobic006G166300 Sobic003G198100--Sobic010G236700 Sobic003G233100 Sobic003G233100 Sobic003G198100--Sobic003G233100 Sobic001G293600 Sobic001G293600 Sobic003G198100--Sobic001G293600 Sobic002G210100 Sobic002G210100 Sobic003G198100--Sobic002G210100 Sobic003G198100--Sobic001G396300 Sobic006G228400 Sobic006G228400 Sobic003G198100--Sobic006G228400 Sobic003G198100--Sobic001G252800 Sobic010G088950 Sobic010G088950 Sobic003G198100--Sobic010G088950 Sobic006G182800--Sobic001G396300 Sobic004G227400 Sobic004G227400 Sobic006G182800--Sobic004G227400 Sobic003G373150 Sobic003G373150 Sobic006G182800--Sobic003G373150 Sobic004G283300 Sobic004G283300 Sobic006G182800--Sobic004G283300 Sobic004G283201 Sobic004G283201 Sobic006G182800--Sobic004G283201 Sobic006G055600 Sobic006G055600 Sobic006G182800--Sobic006G055600 Sobic010G076500 Sobic010G076500 Sobic006G182800--Sobic010G076500 Sobic006G005600 Sobic006G005600 Sobic006G182800--Sobic006G005600 Sobic004G310600 Sobic004G310600 Sobic006G182800--Sobic004G310600 Sobic007G100900 Sobic007G100900 Sobic003G154800--Sobic007G100900 Sobic003G046200 Sobic003G046200 Sobic003G154800--Sobic003G046200 Sobic003G318650 Sobic003G318650 Sobic003G154800--Sobic003G318650 Sobic002G013500 Sobic002G013500 Sobic003G154800--Sobic002G013500 Sobic002G085700 Sobic002G085700 Sobic003G154800--Sobic002G085700 Sobic010G140800 Sobic010G140800 Sobic003G154800--Sobic010G140800 Sobic004G327100 Sobic004G327100 Sobic003G154800--Sobic004G327100 Sobic003G154800--Sobic001G349800 Sobic005G201800 Sobic005G201800 Sobic003G154800--Sobic005G201800 Sobic001G349800--Sobic003G154800 Sobic001G349800--Sobic003G046200 Sobic001G393600 Sobic001G393600 Sobic001G349800--Sobic001G393600 Sobic009G194100 Sobic009G194100 Sobic001G349800--Sobic009G194100 Sobic008G147800 Sobic008G147800 Sobic001G349800--Sobic008G147800 Sobic001G349800--Sobic007G100900 Sobic003G298500 Sobic003G298500 Sobic001G349800--Sobic003G298500 Sobic009G190900 Sobic009G190900 Sobic001G349800--Sobic009G190900 Sobic005G030200 Sobic005G030200 Sobic001G349800--Sobic005G030200 Sobic004G320300 Sobic004G320300 Sobic001G396300--Sobic004G320300 Sobic001G396300--Sobic001G186925 Sobic006G065700 Sobic006G065700 Sobic001G396300--Sobic006G065700 Sobic001G441800 Sobic001G441800 Sobic001G396300--Sobic001G441800 Sobic002G387100 Sobic002G387100 Sobic001G396300--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G396300--Sobic002G430200 Sobic001G004000 Sobic001G004000 Sobic001G396300--Sobic001G004000 Sobic001G525000 Sobic001G525000 Sobic001G396300--Sobic001G525000 Sobic009G198400 Sobic009G198400 Sobic001G396300--Sobic009G198400 Sobic001G523300 Sobic001G523300 Sobic008G088803--Sobic001G523300 Sobic003G406240 Sobic003G406240 Sobic008G088803--Sobic003G406240 Sobic002G396900 Sobic002G396900 Sobic008G088803--Sobic002G396900 Sobic008G096150 Sobic008G096150 Sobic008G088803--Sobic008G096150 Sobic003G295200 Sobic003G295200 Sobic008G088803--Sobic003G295200 Sobic010G200800 Sobic010G200800 Sobic008G088803--Sobic010G200800 Sobic009G031300 Sobic009G031300 Sobic008G088803--Sobic009G031300 Sobic001G309000 Sobic001G309000 Sobic008G088803--Sobic001G309000 Sobic001G400101 Sobic001G400101 Sobic008G088803--Sobic001G400101 Sobic002G188200 Sobic002G188200 Sobic010G196200--Sobic002G188200 Sobic003G250340 Sobic003G250340 Sobic010G196200--Sobic003G250340 Sobic008G045300 Sobic008G045300 Sobic010G196200--Sobic008G045300 Sobic004G328800 Sobic004G328800 Sobic010G196200--Sobic004G328800 Sobic006G044466 Sobic006G044466 Sobic010G196200--Sobic006G044466 Sobic004G325832 Sobic004G325832 Sobic010G196200--Sobic004G325832 Sobic001G003300 Sobic001G003300 Sobic010G196200--Sobic001G003300 Sobic008G175933 Sobic008G175933 Sobic010G196200--Sobic008G175933 Sobic002G152000 Sobic002G152000 Sobic010G196200--Sobic002G152000 Sobic009G187900 Sobic009G187900 Sobic004G244500--Sobic009G187900 Sobic004G162600 Sobic004G162600 Sobic004G244500--Sobic004G162600 Sobic005G038700 Sobic005G038700 Sobic004G244500--Sobic005G038700 Sobic001G087500 Sobic001G087500 Sobic004G244500--Sobic001G087500 Sobic004G205400 Sobic004G205400 Sobic004G244500--Sobic004G205400 Sobic005G116601 Sobic005G116601 Sobic004G244500--Sobic005G116601 Sobic004G244500--Sobic003G250340 Sobic010G118401 Sobic010G118401 Sobic004G244500--Sobic010G118401 Sobic004G244500--Sobic010G196200
Octagon: transcription factors


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