Gene annotation
Transcriptome id Sobic.008G002201.1,Sobic.008G002201.2
Synonym -
Functional annotation -
UniProt A0A1Z5R543
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G13160 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g30900.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033247
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G210600 RIPER3 - Ripening-related family protein precursor, putative, expressed -
2 Sobic.001G155100 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
3 Sobic.003G183100 OsFBO6 - F-box and other domain containing protein, expressed -
4 Sobic.005G220680 - -
5 Sobic.010G030500 - -
6 Sobic.004G168150 - -
7 Sobic.001G370200 - -
8 Sobic.007G195000 cystathionin beta synthase protein, putative, expressed -
9 Sobic.001G538350 - -
10 Sobic.007G209900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
11 Sobic.003G343300 - -
12 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
13 Sobic.005G039000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
14 Sobic.006G062100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
15 Sobic.003G243300 expressed protein -
16 Sobic.001G037066 - -
17 Sobic.001G045400 polygalacturonase, putative, expressed -
18 Sobic.009G249400 protein kinase family protein, putative, expressed -
19 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
20 Sobic.006G232700 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -


Gene co-expression network
sample Sobic008G002201 Sobic008G002201 Sobic001G210600 Sobic001G210600 Sobic008G002201--Sobic001G210600 Sobic001G155100 Sobic001G155100 Sobic008G002201--Sobic001G155100 Sobic003G183100 Sobic003G183100 Sobic008G002201--Sobic003G183100 Sobic005G220680 Sobic005G220680 Sobic008G002201--Sobic005G220680 Sobic010G030500 Sobic010G030500 Sobic008G002201--Sobic010G030500 Sobic004G168150 Sobic004G168150 Sobic008G002201--Sobic004G168150 Sobic001G370200 Sobic001G370200 Sobic008G002201--Sobic001G370200 Sobic007G195000 Sobic007G195000 Sobic008G002201--Sobic007G195000 Sobic001G538350 Sobic001G538350 Sobic008G002201--Sobic001G538350 Sobic001G210600--Sobic008G002201 Sobic001G210600--Sobic003G183100 Sobic009G020300 Sobic009G020300 Sobic001G210600--Sobic009G020300 Sobic001G210600--Sobic001G538350 Sobic001G210600--Sobic001G155100 Sobic001G210600--Sobic005G220680 Sobic007G209900 Sobic007G209900 Sobic001G210600--Sobic007G209900 Sobic001G210600--Sobic010G030500 Sobic001G210600--Sobic004G168150 Sobic001G155100--Sobic005G220680 Sobic001G155100--Sobic007G195000 Sobic003G343300 Sobic003G343300 Sobic001G155100--Sobic003G343300 Sobic001G155100--Sobic004G168150 Sobic006G062100 Sobic006G062100 Sobic001G155100--Sobic006G062100 Sobic001G188100 Sobic001G188100 Sobic001G155100--Sobic001G188100 Sobic003G243300 Sobic003G243300 Sobic001G155100--Sobic003G243300 Sobic003G208900 Sobic003G208900 Sobic001G155100--Sobic003G208900 Sobic004G160000 Sobic004G160000 Sobic001G155100--Sobic004G160000 Sobic003G183100--Sobic001G210600 Sobic003G183100--Sobic008G002201 Sobic003G183100--Sobic009G020300 Sobic003G183100--Sobic001G538350 Sobic003G183100--Sobic001G155100 Sobic003G183100--Sobic005G220680 Sobic009G138401 Sobic009G138401 Sobic003G183100--Sobic009G138401 Sobic003G183100--Sobic010G030500 Sobic003G183100--Sobic001G370200 Sobic005G220680--Sobic001G155100 Sobic007G145500 Sobic007G145500 Sobic005G220680--Sobic007G145500 Sobic005G220680--Sobic001G188100 Sobic006G282100 Sobic006G282100 Sobic005G220680--Sobic006G282100 Sobic004G062300 Sobic004G062300 Sobic005G220680--Sobic004G062300 Sobic010G177200 Sobic010G177200 Sobic005G220680--Sobic010G177200 Sobic005G220680--Sobic007G195000 Sobic010G216100 Sobic010G216100 Sobic005G220680--Sobic010G216100 Sobic001G287400 Sobic001G287400 Sobic005G220680--Sobic001G287400 Sobic006G232700 Sobic006G232700 Sobic010G030500--Sobic006G232700 Sobic010G030500--Sobic003G208900 Sobic005G039000 Sobic005G039000 Sobic010G030500--Sobic005G039000 Sobic001G196400 Sobic001G196400 Sobic010G030500--Sobic001G196400 Sobic003G305500 Sobic003G305500 Sobic010G030500--Sobic003G305500 Sobic003G317000 Sobic003G317000 Sobic010G030500--Sobic003G317000 Sobic010G030500--Sobic001G155100 Sobic010G030500--Sobic004G168150 Sobic007G185801 Sobic007G185801 Sobic010G030500--Sobic007G185801 Sobic010G157900 Sobic010G157900 Sobic004G168150--Sobic010G157900 Sobic004G168150--Sobic003G208900 Sobic004G168150--Sobic001G155100 Sobic004G168150--Sobic007G195000 Sobic004G168150--Sobic003G343300 Sobic002G223650 Sobic002G223650 Sobic004G168150--Sobic002G223650 Sobic003G274100 Sobic003G274100 Sobic004G168150--Sobic003G274100 Sobic004G168150--Sobic005G039000 Sobic004G168150--Sobic003G305500 Sobic001G370200--Sobic010G030500 Sobic005G147900 Sobic005G147900 Sobic001G370200--Sobic005G147900 Sobic001G129150 Sobic001G129150 Sobic001G370200--Sobic001G129150 Sobic006G016800 Sobic006G016800 Sobic001G370200--Sobic006G016800 Sobic008G052800 Sobic008G052800 Sobic001G370200--Sobic008G052800 Sobic005G049900 Sobic005G049900 Sobic001G370200--Sobic005G049900 Sobic001G370200--Sobic006G232700 Sobic002G261400 Sobic002G261400 Sobic001G370200--Sobic002G261400 Sobic001G370200--Sobic007G185801 Sobic007G195000--Sobic003G343300 Sobic007G195000--Sobic006G062100 Sobic003G160600 Sobic003G160600 Sobic007G195000--Sobic003G160600 Sobic007G195000--Sobic005G039000 Sobic003G343000 Sobic003G343000 Sobic007G195000--Sobic003G343000 Sobic007G195000--Sobic003G305500 Sobic004G327000 Sobic004G327000 Sobic007G195000--Sobic004G327000 Sobic007G139300 Sobic007G139300 Sobic007G195000--Sobic007G139300 Sobic008G134600 Sobic008G134600 Sobic007G195000--Sobic008G134600 Sobic001G538350--Sobic008G002201 Sobic001G538350--Sobic001G210600 Sobic001G538350--Sobic003G183100 Sobic001G135700 Sobic001G135700 Sobic001G538350--Sobic001G135700 Sobic001G538350--Sobic005G220680 Sobic001G538350--Sobic001G155100 Sobic001G457500 Sobic001G457500 Sobic001G538350--Sobic001G457500 Sobic007G063800 Sobic007G063800 Sobic001G538350--Sobic007G063800 Sobic001G506400 Sobic001G506400 Sobic001G538350--Sobic001G506400
Octagon: transcription factors


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