Gene annotation
Transcriptome id Sobic.008G012900.1
Synonym Sb08g001200
Functional annotation calmodulin-like protein 1, putative, expressed
UniProt C5YQJ2
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF590
NCBI CDD -
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10190 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os12g04360.1 : calmodulin-like protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a026006
Brachypodium PNT73593
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G012900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
2 Sobic.002G067800 - -
3 Sobic.005G007700 expressed protein -
4 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
5 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
6 Sobic.002G164400 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.010G137400 cysteine-rich receptor-like protein kinase 10 precursor, putative, expressed -
8 Sobic.006G067200 - -
9 Sobic.008G073000 expressed protein -
10 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
11 Sobic.002G341100 bromodomain domain containing protein, expressed -
12 Sobic.006G120400 no apical meristem protein, putative, expressed -
13 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
14 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
15 Sobic.004G158300 transcription factor, putative, expressed -
16 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
17 Sobic.010G269600 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
18 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
19 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
20 Sobic.007G188701 - -


Gene co-expression network
sample Sobic008G012900 Sobic008G012900 Sobic008G165100 Sobic008G165100 Sobic008G012900--Sobic008G165100 Sobic002G067800 Sobic002G067800 Sobic008G012900--Sobic002G067800 Sobic005G007700 Sobic005G007700 Sobic008G012900--Sobic005G007700 Sobic002G095700 Sobic002G095700 Sobic008G012900--Sobic002G095700 Sobic006G203200 Sobic006G203200 Sobic008G012900--Sobic006G203200 Sobic002G164400 Sobic002G164400 Sobic008G012900--Sobic002G164400 Sobic010G137400 Sobic010G137400 Sobic008G012900--Sobic010G137400 Sobic006G067200 Sobic006G067200 Sobic008G012900--Sobic006G067200 Sobic008G073000 Sobic008G073000 Sobic008G012900--Sobic008G073000 Sobic008G165100--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic008G165100--Sobic010G194700 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic008G165100--Sobic002G095700 Sobic006G123900 Sobic006G123900 Sobic008G165100--Sobic006G123900 Sobic002G151600 Sobic002G151600 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic002G067800--Sobic010G194700 Sobic002G067800--Sobic008G165100 Sobic005G059100 Sobic005G059100 Sobic002G067800--Sobic005G059100 Sobic002G067800--Sobic002G095700 Sobic002G067800--Sobic008G073000 Sobic002G159200 Sobic002G159200 Sobic002G067800--Sobic002G159200 Sobic003G355000 Sobic003G355000 Sobic002G067800--Sobic003G355000 Sobic007G043500 Sobic007G043500 Sobic002G067800--Sobic007G043500 Sobic002G067800--Sobic006G123900 Sobic001G222900 Sobic001G222900 Sobic005G007700--Sobic001G222900 Sobic005G007700--Sobic010G137400 Sobic007G112900 Sobic007G112900 Sobic005G007700--Sobic007G112900 Sobic010G143200 Sobic010G143200 Sobic005G007700--Sobic010G143200 Sobic005G007700--Sobic008G165100 Sobic010G269600 Sobic010G269600 Sobic005G007700--Sobic010G269600 Sobic003G159450 Sobic003G159450 Sobic005G007700--Sobic003G159450 Sobic005G229000 Sobic005G229000 Sobic005G007700--Sobic005G229000 Sobic010G000700 Sobic010G000700 Sobic005G007700--Sobic010G000700 Sobic006G278200 Sobic006G278200 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G089900 Sobic002G089900 Sobic002G095700--Sobic002G089900 Sobic009G022100 Sobic009G022100 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100 Sobic002G016900 Sobic002G016900 Sobic006G203200--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic006G203200--Sobic003G244700 Sobic002G253600 Sobic002G253600 Sobic006G203200--Sobic002G253600 Sobic006G120400 Sobic006G120400 Sobic006G203200--Sobic006G120400 Sobic002G341100 Sobic002G341100 Sobic006G203200--Sobic002G341100 Sobic001G130700 Sobic001G130700 Sobic006G203200--Sobic001G130700 Sobic008G156200 Sobic008G156200 Sobic006G203200--Sobic008G156200 Sobic009G242800 Sobic009G242800 Sobic006G203200--Sobic009G242800 Sobic002G002500 Sobic002G002500 Sobic006G203200--Sobic002G002500 Sobic002G330400 Sobic002G330400 Sobic002G164400--Sobic002G330400 Sobic002G164400--Sobic006G123900 Sobic002G039500 Sobic002G039500 Sobic002G164400--Sobic002G039500 Sobic002G164400--Sobic008G165100 Sobic008G106000 Sobic008G106000 Sobic002G164400--Sobic008G106000 Sobic002G253500 Sobic002G253500 Sobic002G164400--Sobic002G253500 Sobic002G077200 Sobic002G077200 Sobic002G164400--Sobic002G077200 Sobic007G155900 Sobic007G155900 Sobic002G164400--Sobic007G155900 Sobic002G019600 Sobic002G019600 Sobic002G164400--Sobic002G019600 Sobic010G137400--Sobic005G007700 Sobic002G095900 Sobic002G095900 Sobic010G137400--Sobic002G095900 Sobic003G020600 Sobic003G020600 Sobic010G137400--Sobic003G020600 Sobic004G289600 Sobic004G289600 Sobic010G137400--Sobic004G289600 Sobic010G137400--Sobic003G159450 Sobic010G137400--Sobic010G000700 Sobic004G291800 Sobic004G291800 Sobic010G137400--Sobic004G291800 Sobic010G137400--Sobic008G012900 Sobic010G137400--Sobic002G164400 Sobic001G228700 Sobic001G228700 Sobic006G067200--Sobic001G228700 Sobic006G039900 Sobic006G039900 Sobic006G067200--Sobic006G039900 Sobic006G067200--Sobic008G165100 Sobic001G426900 Sobic001G426900 Sobic006G067200--Sobic001G426900 Sobic009G137900 Sobic009G137900 Sobic006G067200--Sobic009G137900 Sobic006G067200--Sobic002G067800 Sobic001G425000 Sobic001G425000 Sobic006G067200--Sobic001G425000 Sobic001G202266 Sobic001G202266 Sobic006G067200--Sobic001G202266 Sobic007G002900 Sobic007G002900 Sobic006G067200--Sobic007G002900 Sobic008G073000--Sobic005G030300 Sobic008G073000--Sobic002G045400 Sobic008G073000--Sobic002G095700 Sobic008G101800 Sobic008G101800 Sobic008G073000--Sobic008G101800 Sobic008G073000--Sobic001G202266 Sobic008G073000--Sobic006G278200 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic008G073000--Sobic002G067800
Octagon: transcription factors


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