Gene annotation
Transcriptome id Sobic.008G054700.4,Sobic.008G054700.3
Synonym Sb08g004650
Functional annotation growth regulator related protein, putative, expressed
UniProt A0A1Z5R4W6
Pfam PF10250
Panther DB PTHR31288 PTHR31288:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G35510 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os12g07540.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a012823 , Zm00025a054051
Brachypodium KQJ92041 , KQJ92043 , KQJ92042 , KQJ89200 , KQJ89192 , KQJ89199 , KQJ89198 , PNT65372
Barley HORVU4Hr1G019000.18 , HORVU4Hr1G019000.12 , HORVU4Hr1G019000.13 , HORVU4Hr1G019000.10 , HORVU4Hr1G019000.11 , HORVU4Hr1G019000.16 , HORVU4Hr1G019000.17 , HORVU4Hr1G019000.15 , HORVU5Hr1G036790.6 , HORVU5Hr1G036790.7 , HORVU5Hr1G036790.4 , HORVU5Hr1G036790.5 , HORVU5Hr1G036790.2 , HORVU5Hr1G036790.3 , HORVU5Hr1G036790.1 , HORVU5Hr1G036790.8 , HORVU4Hr1G019000.23 , HORVU4Hr1G019000.22 , HORVU4Hr1G019000.21 , HORVU4Hr1G019000.20 , HORVU4Hr1G019000.27 , HORVU4Hr1G019000.26 , HORVU4Hr1G019000.25 , HORVU4Hr1G019000.24 , HORVU4Hr1G019000.28 , HORVU4Hr1G019000.1 , HORVU4Hr1G019000.3 , HORVU4Hr1G019000.4 , HORVU4Hr1G019000.5 , HORVU4Hr1G019000.6 , HORVU4Hr1G019000.7 , HORVU4Hr1G019000.8 , HORVU4Hr1G019000.9 , HORVU4Hr1G019000.32 , HORVU4Hr1G019000.34 , HORVU4Hr1G019000.35
Wheat TraesCS4D02G091500 , TraesCS4D02G091500 , TraesCS4D02G091500 , TraesCS5A02G111900 , TraesCS4D02G213200 , TraesCS4B02G134300 , TraesCS6A02G177400 , TraesCS4A02G216500 , TraesCS4A02G216500 , TraesCS3A02G205400 , TraesCS4B02G094700 , TraesCS5D02G127900 , TraesCS5B02G118900 , TraesCS5B02G118900
Populus PNT15894


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cDNA sequences
Sobic.008G054700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
2 Sobic.004G145701 - K02978: RP-S27e, small subunit ribosomal protein S27e
3 Sobic.008G030501 - -
4 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.004G046800 expressed protein -
6 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
7 Sobic.008G124600 expressed protein -
8 Sobic.004G057300 expressed protein -
9 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
10 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
11 Sobic.001G539400 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
12 Sobic.008G007700 expressed protein -
13 Sobic.009G121200 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
14 Sobic.006G193400 regulatory protein, putative, expressed -
15 Sobic.009G229400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
16 Sobic.008G029800 expressed protein -
17 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
18 Sobic.007G074300 MATE efflux family protein, putative, expressed -
19 Sobic.005G174750 - -
20 Sobic.004G256100 transporter-related, putative, expressed -


Gene co-expression network
sample Sobic008G054700 Sobic008G054700 Sobic006G265800 Sobic006G265800 Sobic008G054700--Sobic006G265800 Sobic004G145701 Sobic004G145701 Sobic008G054700--Sobic004G145701 Sobic008G030501 Sobic008G030501 Sobic008G054700--Sobic008G030501 Sobic003G244400 Sobic003G244400 Sobic008G054700--Sobic003G244400 Sobic004G046800 Sobic004G046800 Sobic008G054700--Sobic004G046800 Sobic001G384200 Sobic001G384200 Sobic008G054700--Sobic001G384200 Sobic008G124600 Sobic008G124600 Sobic008G054700--Sobic008G124600 Sobic004G057300 Sobic004G057300 Sobic008G054700--Sobic004G057300 Sobic001G400000 Sobic001G400000 Sobic008G054700--Sobic001G400000 Sobic006G265800--Sobic001G384200 Sobic006G134500 Sobic006G134500 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic003G024100 Sobic003G024100 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600 Sobic004G145701--Sobic008G030501 Sobic008G095500 Sobic008G095500 Sobic004G145701--Sobic008G095500 Sobic004G145701--Sobic004G046800 Sobic001G518900 Sobic001G518900 Sobic004G145701--Sobic001G518900 Sobic008G071800 Sobic008G071800 Sobic004G145701--Sobic008G071800 Sobic002G176000 Sobic002G176000 Sobic004G145701--Sobic002G176000 Sobic001G364300 Sobic001G364300 Sobic004G145701--Sobic001G364300 Sobic002G226800 Sobic002G226800 Sobic004G145701--Sobic002G226800 Sobic006G170500 Sobic006G170500 Sobic004G145701--Sobic006G170500 Sobic008G030501--Sobic006G170500 Sobic008G029800 Sobic008G029800 Sobic008G030501--Sobic008G029800 Sobic007G082300 Sobic007G082300 Sobic008G030501--Sobic007G082300 Sobic010G196700 Sobic010G196700 Sobic008G030501--Sobic010G196700 Sobic009G060100 Sobic009G060100 Sobic008G030501--Sobic009G060100 Sobic008G030501--Sobic001G364300 Sobic005G058200 Sobic005G058200 Sobic008G030501--Sobic005G058200 Sobic004G086900 Sobic004G086900 Sobic008G030501--Sobic004G086900 Sobic007G110800 Sobic007G110800 Sobic008G030501--Sobic007G110800 Sobic001G370400 Sobic001G370400 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic001G432200 Sobic001G432200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic001G340800 Sobic001G340800 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G244400--Sobic010G003200 Sobic004G046800--Sobic008G055200 Sobic001G194800 Sobic001G194800 Sobic004G046800--Sobic001G194800 Sobic001G106800 Sobic001G106800 Sobic004G046800--Sobic001G106800 Sobic002G192800 Sobic002G192800 Sobic004G046800--Sobic002G192800 Sobic008G120920 Sobic008G120920 Sobic004G046800--Sobic008G120920 Sobic004G046800--Sobic008G029800 Sobic010G124900 Sobic010G124900 Sobic004G046800--Sobic010G124900 Sobic001G117100 Sobic001G117100 Sobic004G046800--Sobic001G117100 Sobic004G046800--Sobic008G030501 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic008G166100 Sobic008G166100 Sobic001G384200--Sobic008G166100 Sobic009G178400 Sobic009G178400 Sobic001G384200--Sobic009G178400 Sobic001G384200--Sobic001G370400 Sobic001G384200--Sobic003G244400 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic004G256100 Sobic004G256100 Sobic008G124600--Sobic004G256100 Sobic007G193600 Sobic007G193600 Sobic008G124600--Sobic007G193600 Sobic001G474100 Sobic001G474100 Sobic008G124600--Sobic001G474100 Sobic003G018000 Sobic003G018000 Sobic008G124600--Sobic003G018000 Sobic001G103600 Sobic001G103600 Sobic008G124600--Sobic001G103600 Sobic009G047900 Sobic009G047900 Sobic008G124600--Sobic009G047900 Sobic008G124600--Sobic001G518900 Sobic008G144701 Sobic008G144701 Sobic008G124600--Sobic008G144701 Sobic001G241700 Sobic001G241700 Sobic008G124600--Sobic001G241700 Sobic003G191200 Sobic003G191200 Sobic004G057300--Sobic003G191200 Sobic004G052600 Sobic004G052600 Sobic004G057300--Sobic004G052600 Sobic007G082100 Sobic007G082100 Sobic004G057300--Sobic007G082100 Sobic007G081100 Sobic007G081100 Sobic004G057300--Sobic007G081100 Sobic007G031200 Sobic007G031200 Sobic004G057300--Sobic007G031200 Sobic007G198900 Sobic007G198900 Sobic004G057300--Sobic007G198900 Sobic001G538425 Sobic001G538425 Sobic004G057300--Sobic001G538425 Sobic010G123800 Sobic010G123800 Sobic004G057300--Sobic010G123800 Sobic005G058300 Sobic005G058300 Sobic004G057300--Sobic005G058300 Sobic004G113600 Sobic004G113600 Sobic001G400000--Sobic004G113600 Sobic001G112600 Sobic001G112600 Sobic001G400000--Sobic001G112600 Sobic001G400000--Sobic001G384200 Sobic005G050400 Sobic005G050400 Sobic001G400000--Sobic005G050400 Sobic001G400000--Sobic003G244400 Sobic001G400000--Sobic006G265800 Sobic004G007400 Sobic004G007400 Sobic001G400000--Sobic004G007400 Sobic008G055600 Sobic008G055600 Sobic001G400000--Sobic008G055600 Sobic001G400000--Sobic008G156600
Octagon: transcription factors


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