Gene annotation
Transcriptome id Sobic.008G060100.1
Synonym
Functional annotation -
UniProt C5YT56
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G333150 - -
2 Sobic.004G252400 ASC1-like protein 2 (Os)(PubMedID : 27208977)@ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
3 Sobic.003G271500 expressed protein -
4 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
5 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
7 Sobic.010G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G111800 VQ domain containing protein, putative, expressed -
9 Sobic.003G206900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
12 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.005G092900 - -
14 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
15 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G255200 BHLH transcription factor, putative, expressed -
17 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
19 Sobic.002G139300 AP2 domain containing protein, expressed -
20 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic008G060100 Sobic008G060100 Sobic004G333150 Sobic004G333150 Sobic008G060100--Sobic004G333150 Sobic004G252400 Sobic004G252400 Sobic008G060100--Sobic004G252400 Sobic003G271500 Sobic003G271500 Sobic008G060100--Sobic003G271500 Sobic001G100700 Sobic001G100700 Sobic008G060100--Sobic001G100700 Sobic009G106800 Sobic009G106800 Sobic008G060100--Sobic009G106800 Sobic005G182500 Sobic005G182500 Sobic008G060100--Sobic005G182500 Sobic010G079600 Sobic010G079600 Sobic008G060100--Sobic010G079600 Sobic004G111800 Sobic004G111800 Sobic008G060100--Sobic004G111800 Sobic003G206900 Sobic003G206900 Sobic008G060100--Sobic003G206900 Sobic004G240600 Sobic004G240600 Sobic004G333150--Sobic004G240600 Sobic010G052700 Sobic010G052700 Sobic004G333150--Sobic010G052700 Sobic003G087300 Sobic003G087300 Sobic004G333150--Sobic003G087300 Sobic004G333150--Sobic009G106800 Sobic005G203100 Sobic005G203100 Sobic004G333150--Sobic005G203100 Sobic004G273400 Sobic004G273400 Sobic004G333150--Sobic004G273400 Sobic002G421800 Sobic002G421800 Sobic004G333150--Sobic002G421800 Sobic009G196400 Sobic009G196400 Sobic004G333150--Sobic009G196400 Sobic004G333150--Sobic001G100700 Sobic002G233100 Sobic002G233100 Sobic004G252400--Sobic002G233100 Sobic007G161400 Sobic007G161400 Sobic004G252400--Sobic007G161400 Sobic003G436800 Sobic003G436800 Sobic004G252400--Sobic003G436800 Sobic006G059700 Sobic006G059700 Sobic004G252400--Sobic006G059700 Sobic005G043000 Sobic005G043000 Sobic004G252400--Sobic005G043000 Sobic002G196100 Sobic002G196100 Sobic004G252400--Sobic002G196100 Sobic010G071900 Sobic010G071900 Sobic004G252400--Sobic010G071900 Sobic002G312900 Sobic002G312900 Sobic004G252400--Sobic002G312900 Sobic010G272300 Sobic010G272300 Sobic004G252400--Sobic010G272300 Sobic009G217700 Sobic009G217700 Sobic003G271500--Sobic009G217700 Sobic010G113600 Sobic010G113600 Sobic003G271500--Sobic010G113600 Sobic003G271500--Sobic010G052700 Sobic003G364000 Sobic003G364000 Sobic003G271500--Sobic003G364000 Sobic009G139700 Sobic009G139700 Sobic003G271500--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic003G271500--Sobic004G107700 Sobic003G255200 Sobic003G255200 Sobic003G271500--Sobic003G255200 Sobic003G240600 Sobic003G240600 Sobic003G271500--Sobic003G240600 Sobic003G155600 Sobic003G155600 Sobic003G271500--Sobic003G155600 Sobic005G213200 Sobic005G213200 Sobic001G100700--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G100700--Sobic001G243500 Sobic001G444400 Sobic001G444400 Sobic001G100700--Sobic001G444400 Sobic001G243600 Sobic001G243600 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic009G120000 Sobic009G120000 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic010G209900 Sobic010G209900 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic009G106800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic009G106800--Sobic010G084400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic003G252800 Sobic003G252800 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100 Sobic008G191600 Sobic008G191600 Sobic005G182500--Sobic008G191600 Sobic005G038900 Sobic005G038900 Sobic005G182500--Sobic005G038900 Sobic005G182500--Sobic002G312900 Sobic004G144500 Sobic004G144500 Sobic005G182500--Sobic004G144500 Sobic009G230100 Sobic009G230100 Sobic005G182500--Sobic009G230100 Sobic003G362100 Sobic003G362100 Sobic005G182500--Sobic003G362100 Sobic008G032100 Sobic008G032100 Sobic005G182500--Sobic008G032100 Sobic005G182500--Sobic004G111800 Sobic005G182500--Sobic005G213200 Sobic007G170000 Sobic007G170000 Sobic010G079600--Sobic007G170000 Sobic003G364100 Sobic003G364100 Sobic010G079600--Sobic003G364100 Sobic002G044800 Sobic002G044800 Sobic010G079600--Sobic002G044800 Sobic001G256200 Sobic001G256200 Sobic010G079600--Sobic001G256200 Sobic010G079600--Sobic009G196400 Sobic010G079600--Sobic004G333150 Sobic010G079600--Sobic002G421800 Sobic010G079600--Sobic004G273400 Sobic006G113500 Sobic006G113500 Sobic010G079600--Sobic006G113500 Sobic004G111800--Sobic001G444400 Sobic004G111800--Sobic010G084400 Sobic004G111800--Sobic006G153100 Sobic004G111800--Sobic009G106800 Sobic004G111800--Sobic003G252800 Sobic005G101800 Sobic005G101800 Sobic004G111800--Sobic005G101800 Sobic005G206601 Sobic005G206601 Sobic004G111800--Sobic005G206601 Sobic001G348700 Sobic001G348700 Sobic004G111800--Sobic001G348700 Sobic001G339700 Sobic001G339700 Sobic004G111800--Sobic001G339700 Sobic003G206900--Sobic010G071900 Sobic003G206900--Sobic003G240600 Sobic010G019900 Sobic010G019900 Sobic003G206900--Sobic010G019900 Sobic003G206900--Sobic005G038900 Sobic004G304100 Sobic004G304100 Sobic003G206900--Sobic004G304100 Sobic010G185500 Sobic010G185500 Sobic003G206900--Sobic010G185500 Sobic005G092900 Sobic005G092900 Sobic003G206900--Sobic005G092900 Sobic003G206900--Sobic004G107700 Sobic007G148000 Sobic007G148000 Sobic003G206900--Sobic007G148000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.