Gene annotation
Transcriptome id Sobic.008G095200.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5R6V0
Pfam -
Panther DB PTHR10825 PTHR10825:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13250 : RING finger protein
RAP-DB (Rice) LOC_Os12g29500.1 : expressed protein
MaizeGDB (Corn) Zm00025a054127 , Zm00025a042520 , Zm00025a024875
Brachypodium KQJ86747 , KQJ86746 , PNT62717 , KQJ86748
Barley -
Wheat TraesCS5A02G121200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
2 Sobic.001G424132 - -
3 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.001G086050 - -
5 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
6 Sobic.003G251800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
7 Sobic.002G352000 expressed protein -
8 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
9 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
10 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
11 Sobic.010G232000 RIC10, putative, expressed -
12 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
13 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.003G112200 Cupin domain containing protein, expressed -
15 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
16 Sobic.003G236701 - -
17 Sobic.007G078200 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
18 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.004G218700 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
20 Sobic.009G162700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G095200 Sobic008G095200 Sobic005G087200 Sobic005G087200 Sobic008G095200--Sobic005G087200 Sobic001G424132 Sobic001G424132 Sobic008G095200--Sobic001G424132 Sobic003G153400 Sobic003G153400 Sobic008G095200--Sobic003G153400 Sobic001G086050 Sobic001G086050 Sobic008G095200--Sobic001G086050 Sobic008G173200 Sobic008G173200 Sobic008G095200--Sobic008G173200 Sobic003G251800 Sobic003G251800 Sobic008G095200--Sobic003G251800 Sobic002G352000 Sobic002G352000 Sobic008G095200--Sobic002G352000 Sobic002G164600 Sobic002G164600 Sobic008G095200--Sobic002G164600 Sobic010G199700 Sobic010G199700 Sobic008G095200--Sobic010G199700 Sobic003G387500 Sobic003G387500 Sobic005G087200--Sobic003G387500 Sobic009G226900 Sobic009G226900 Sobic005G087200--Sobic009G226900 Sobic005G087200--Sobic002G164600 Sobic003G236701 Sobic003G236701 Sobic005G087200--Sobic003G236701 Sobic003G112200 Sobic003G112200 Sobic005G087200--Sobic003G112200 Sobic001G336700 Sobic001G336700 Sobic005G087200--Sobic001G336700 Sobic001G406700 Sobic001G406700 Sobic005G087200--Sobic001G406700 Sobic009G241600 Sobic009G241600 Sobic005G087200--Sobic009G241600 Sobic008G112200 Sobic008G112200 Sobic005G087200--Sobic008G112200 Sobic001G424132--Sobic008G095200 Sobic001G510000 Sobic001G510000 Sobic001G424132--Sobic001G510000 Sobic006G188100 Sobic006G188100 Sobic001G424132--Sobic006G188100 Sobic004G046100 Sobic004G046100 Sobic001G424132--Sobic004G046100 Sobic003G085200 Sobic003G085200 Sobic001G424132--Sobic003G085200 Sobic009G009300 Sobic009G009300 Sobic001G424132--Sobic009G009300 Sobic001G424132--Sobic003G153400 Sobic008G005400 Sobic008G005400 Sobic001G424132--Sobic008G005400 Sobic001G424132--Sobic005G087200 Sobic006G166800 Sobic006G166800 Sobic003G153400--Sobic006G166800 Sobic007G027200 Sobic007G027200 Sobic003G153400--Sobic007G027200 Sobic003G153400--Sobic008G173200 Sobic003G153400--Sobic010G199700 Sobic009G151000 Sobic009G151000 Sobic003G153400--Sobic009G151000 Sobic010G196400 Sobic010G196400 Sobic003G153400--Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic003G153400--Sobic009G162800 Sobic007G043800 Sobic007G043800 Sobic003G153400--Sobic007G043800 Sobic010G112800 Sobic010G112800 Sobic003G153400--Sobic010G112800 Sobic009G231600 Sobic009G231600 Sobic001G086050--Sobic009G231600 Sobic003G119200 Sobic003G119200 Sobic001G086050--Sobic003G119200 Sobic008G017300 Sobic008G017300 Sobic001G086050--Sobic008G017300 Sobic007G078200 Sobic007G078200 Sobic001G086050--Sobic007G078200 Sobic004G270900 Sobic004G270900 Sobic001G086050--Sobic004G270900 Sobic002G215866 Sobic002G215866 Sobic001G086050--Sobic002G215866 Sobic006G232100 Sobic006G232100 Sobic001G086050--Sobic006G232100 Sobic001G086050--Sobic008G095200 Sobic009G105300 Sobic009G105300 Sobic001G086050--Sobic009G105300 Sobic008G173200--Sobic009G151000 Sobic008G173200--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic008G173200--Sobic001G275600 Sobic008G173200--Sobic007G043800 Sobic008G173200--Sobic006G166800 Sobic008G173200--Sobic007G027200 Sobic008G173200--Sobic009G162800 Sobic008G173200--Sobic010G196400 Sobic008G163000 Sobic008G163000 Sobic008G173200--Sobic008G163000 Sobic003G251800--Sobic002G164600 Sobic003G251800--Sobic003G236701 Sobic006G209300 Sobic006G209300 Sobic003G251800--Sobic006G209300 Sobic003G251800--Sobic003G387500 Sobic007G223600 Sobic007G223600 Sobic003G251800--Sobic007G223600 Sobic008G059800 Sobic008G059800 Sobic003G251800--Sobic008G059800 Sobic003G251800--Sobic005G087200 Sobic006G226200 Sobic006G226200 Sobic003G251800--Sobic006G226200 Sobic003G251800--Sobic009G241600 Sobic006G144600 Sobic006G144600 Sobic002G352000--Sobic006G144600 Sobic010G232500 Sobic010G232500 Sobic002G352000--Sobic010G232500 Sobic002G352000--Sobic007G223600 Sobic002G352000--Sobic003G387500 Sobic002G352000--Sobic006G226200 Sobic002G352000--Sobic001G406700 Sobic009G162700 Sobic009G162700 Sobic002G352000--Sobic009G162700 Sobic006G148800 Sobic006G148800 Sobic002G352000--Sobic006G148800 Sobic002G352000--Sobic006G209300 Sobic002G164600--Sobic003G236701 Sobic002G164600--Sobic007G223600 Sobic002G164600--Sobic008G059800 Sobic002G164600--Sobic006G226200 Sobic002G164600--Sobic003G112200 Sobic006G066500 Sobic006G066500 Sobic002G164600--Sobic006G066500 Sobic002G164600--Sobic006G209300 Sobic002G164600--Sobic009G241600 Sobic005G229100 Sobic005G229100 Sobic002G164600--Sobic005G229100 Sobic010G199700--Sobic009G241600 Sobic010G199700--Sobic008G112200 Sobic010G199700--Sobic007G027200 Sobic010G199700--Sobic008G059800 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic010G199700--Sobic003G236701 Sobic010G199700--Sobic006G166800 Sobic009G153800 Sobic009G153800 Sobic010G199700--Sobic009G153800
Octagon: transcription factors


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