Gene annotation
Transcriptome id Sobic.002G352000.1
Synonym Sb02g037400
Functional annotation expressed protein
UniProt C5XCE7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g38950.1 : expressed protein
MaizeGDB (Corn) Zm00025a048496 , Zm00025a014983
Brachypodium -
Barley HORVU0Hr1G003110.1 , HORVU0Hr1G003110.2 , HORVU2Hr1G037000.2 , HORVU2Hr1G037000.3 , HORVU2Hr1G037000.1 , HORVU2Hr1G037000.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
2 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
4 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
5 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
6 Sobic.001G406700 expressed protein -
7 Sobic.009G162700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
8 Sobic.006G148800 "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@phenylalanine ammonia-lyase, putative, expressed K13064: phenylalanine/tyrosine ammonia-lyase
9 Sobic.006G209300 transferase family domain containing protein, expressed -
10 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
11 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
12 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
13 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
14 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
15 Sobic.006G066500 expressed protein -
16 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.003G236701 - -
18 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
19 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
20 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A


Gene co-expression network
sample Sobic002G352000 Sobic002G352000 Sobic006G144600 Sobic006G144600 Sobic002G352000--Sobic006G144600 Sobic010G232500 Sobic010G232500 Sobic002G352000--Sobic010G232500 Sobic007G223600 Sobic007G223600 Sobic002G352000--Sobic007G223600 Sobic003G387500 Sobic003G387500 Sobic002G352000--Sobic003G387500 Sobic006G226200 Sobic006G226200 Sobic002G352000--Sobic006G226200 Sobic001G406700 Sobic001G406700 Sobic002G352000--Sobic001G406700 Sobic009G162700 Sobic009G162700 Sobic002G352000--Sobic009G162700 Sobic006G148800 Sobic006G148800 Sobic002G352000--Sobic006G148800 Sobic006G209300 Sobic006G209300 Sobic002G352000--Sobic006G209300 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic002G167600 Sobic002G167600 Sobic006G144600--Sobic002G167600 Sobic009G170500 Sobic009G170500 Sobic006G144600--Sobic009G170500 Sobic001G399200 Sobic001G399200 Sobic006G144600--Sobic001G399200 Sobic005G229100 Sobic005G229100 Sobic006G144600--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic006G144600--Sobic007G119500 Sobic006G144600--Sobic007G223600 Sobic010G232500--Sobic006G144600 Sobic010G232500--Sobic001G406700 Sobic010G232500--Sobic005G229100 Sobic010G232500--Sobic003G387500 Sobic010G232500--Sobic006G226200 Sobic010G232500--Sobic002G167600 Sobic010G232500--Sobic001G399200 Sobic003G231500 Sobic003G231500 Sobic010G232500--Sobic003G231500 Sobic010G232500--Sobic007G223600 Sobic002G164600 Sobic002G164600 Sobic007G223600--Sobic002G164600 Sobic002G205500 Sobic002G205500 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic003G236701 Sobic003G236701 Sobic007G223600--Sobic003G236701 Sobic003G296400 Sobic003G296400 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic006G066500 Sobic006G066500 Sobic007G223600--Sobic006G066500 Sobic001G224300 Sobic001G224300 Sobic007G223600--Sobic001G224300 Sobic008G059800 Sobic008G059800 Sobic007G223600--Sobic008G059800 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic003G387500--Sobic001G224300 Sobic003G387500--Sobic010G232500 Sobic003G387500--Sobic002G167600 Sobic003G387500--Sobic009G170500 Sobic003G387500--Sobic009G162700 Sobic003G387500--Sobic002G205500 Sobic009G226900 Sobic009G226900 Sobic003G387500--Sobic009G226900 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic003G112200 Sobic003G112200 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic006G226200--Sobic002G205500 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic001G406700--Sobic005G229100 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700 Sobic009G162700--Sobic003G387500 Sobic009G162700--Sobic006G144600 Sobic009G162700--Sobic001G406700 Sobic009G162700--Sobic010G232500 Sobic009G162700--Sobic002G167600 Sobic009G162700--Sobic002G205500 Sobic009G162700--Sobic001G224300 Sobic008G137000 Sobic008G137000 Sobic009G162700--Sobic008G137000 Sobic009G162700--Sobic002G352000 Sobic005G132300 Sobic005G132300 Sobic006G148800--Sobic005G132300 Sobic006G148800--Sobic001G224300 Sobic006G148800--Sobic003G296400 Sobic006G148800--Sobic006G226200 Sobic001G409100 Sobic001G409100 Sobic006G148800--Sobic001G409100 Sobic004G221300 Sobic004G221300 Sobic006G148800--Sobic004G221300 Sobic006G148800--Sobic003G112200 Sobic006G148800--Sobic002G205500 Sobic006G148800--Sobic006G066500 Sobic006G209300--Sobic003G231500 Sobic006G209300--Sobic002G164600 Sobic006G209300--Sobic003G236701 Sobic006G209300--Sobic006G226200 Sobic006G209300--Sobic010G232500 Sobic006G209300--Sobic007G223600 Sobic006G209300--Sobic006G066500 Sobic006G209300--Sobic003G112200 Sobic006G209300--Sobic008G059800
Octagon: transcription factors


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