Gene annotation
Transcriptome id Sobic.008G127100.1,Sobic.008G127100.2
Synonym Sb08g017830
Functional annotation CTP synthase, putative, expressed
UniProt C5YPR1
Pfam PF07722 PF06418
Panther DB PTHR11550 PTHR11550:SF7
NCBI CDD -
KEGG Orthology K01937; pyrG, CTP synthase
Gene Ontology GO:0016787; hydrolase activity GO:0006541glutamine metabolic process GO:0006221pyrimidine nucleotide biosynthetic process GO:0003883CTP synthase activity


Orthologs (automatic annotation)
TAIR AT4G02120 : CTP synthase family protein
RAP-DB (Rice) LOC_Os12g36950.1 : CTP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a025485 , Zm00025a028748
Brachypodium KQJ86350 , KQJ86351 , KQJ86352 , KQK08735 , PNT62545 , KQK08734
Barley -
Wheat TraesCS3D02G231000 , TraesCS3A02G236700 , TraesCS3A02G236700 , TraesCS3A02G236700 , TraesCS3D02G237100 , TraesCS5B02G095600 , TraesCS5B02G095600 , TraesCS5B02G095600 , TraesCS5B02G095600 , TraesCS3B02G263100 , TraesCS3B02G263100 , TraesCS3A02G222100 , TraesCS3B02G252000 , TraesCS5D02G101900 , TraesCS5D02G101900 , TraesCS5A02G089900
Populus -


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cDNA sequences
Sobic.008G127100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G418800 - -
2 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
3 Sobic.001G517800 NIN, putative, expressed -
4 Sobic.006G279200 expressed protein K11789: DCAF1, DDB1- and CUL4-associated factor 1
5 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
6 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.001G459600 expressed protein -
8 Sobic.001G468100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.001G282600 transporter family protein, putative, expressed -
11 Sobic.004G319400 - K10901: BLM, RECQL3, bloom syndrome protein
12 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
13 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
14 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
15 Sobic.009G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.006G028900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
18 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
19 Sobic.001G000700 glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
20 Sobic.008G060700 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G127100 Sobic008G127100 Sobic002G418800 Sobic002G418800 Sobic008G127100--Sobic002G418800 Sobic003G398100 Sobic003G398100 Sobic008G127100--Sobic003G398100 Sobic001G517800 Sobic001G517800 Sobic008G127100--Sobic001G517800 Sobic006G279200 Sobic006G279200 Sobic008G127100--Sobic006G279200 Sobic008G153400 Sobic008G153400 Sobic008G127100--Sobic008G153400 Sobic007G210500 Sobic007G210500 Sobic008G127100--Sobic007G210500 Sobic001G459600 Sobic001G459600 Sobic008G127100--Sobic001G459600 Sobic001G468100 Sobic001G468100 Sobic008G127100--Sobic001G468100 Sobic003G355600 Sobic003G355600 Sobic008G127100--Sobic003G355600 Sobic002G418800--Sobic001G459600 Sobic001G000501 Sobic001G000501 Sobic002G418800--Sobic001G000501 Sobic005G089400 Sobic005G089400 Sobic002G418800--Sobic005G089400 Sobic008G166550 Sobic008G166550 Sobic002G418800--Sobic008G166550 Sobic004G034600 Sobic004G034600 Sobic002G418800--Sobic004G034600 Sobic002G418800--Sobic001G517800 Sobic009G098200 Sobic009G098200 Sobic002G418800--Sobic009G098200 Sobic009G101800 Sobic009G101800 Sobic002G418800--Sobic009G101800 Sobic004G175400 Sobic004G175400 Sobic002G418800--Sobic004G175400 Sobic006G199000 Sobic006G199000 Sobic003G398100--Sobic006G199000 Sobic003G398100--Sobic008G153400 Sobic009G207600 Sobic009G207600 Sobic003G398100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic003G398100--Sobic001G504900 Sobic003G257100 Sobic003G257100 Sobic003G398100--Sobic003G257100 Sobic001G496100 Sobic001G496100 Sobic003G398100--Sobic001G496100 Sobic003G398100--Sobic003G355600 Sobic003G322700 Sobic003G322700 Sobic003G398100--Sobic003G322700 Sobic001G150600 Sobic001G150600 Sobic003G398100--Sobic001G150600 Sobic001G517800--Sobic001G459600 Sobic003G301900 Sobic003G301900 Sobic001G517800--Sobic003G301900 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic009G011600 Sobic009G011600 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300 Sobic005G028600 Sobic005G028600 Sobic006G279200--Sobic005G028600 Sobic001G037100 Sobic001G037100 Sobic006G279200--Sobic001G037100 Sobic003G229500 Sobic003G229500 Sobic006G279200--Sobic003G229500 Sobic002G430000 Sobic002G430000 Sobic006G279200--Sobic002G430000 Sobic001G117200 Sobic001G117200 Sobic006G279200--Sobic001G117200 Sobic003G247300 Sobic003G247300 Sobic006G279200--Sobic003G247300 Sobic003G246100 Sobic003G246100 Sobic006G279200--Sobic003G246100 Sobic001G050200 Sobic001G050200 Sobic006G279200--Sobic001G050200 Sobic001G058700 Sobic001G058700 Sobic006G279200--Sobic001G058700 Sobic008G153400--Sobic001G150600 Sobic008G153400--Sobic006G199000 Sobic006G030700 Sobic006G030700 Sobic008G153400--Sobic006G030700 Sobic001G325200 Sobic001G325200 Sobic008G153400--Sobic001G325200 Sobic008G153400--Sobic003G398100 Sobic008G153400--Sobic003G257100 Sobic003G087200 Sobic003G087200 Sobic008G153400--Sobic003G087200 Sobic006G091700 Sobic006G091700 Sobic008G153400--Sobic006G091700 Sobic009G226300 Sobic009G226300 Sobic008G153400--Sobic009G226300 Sobic001G282600 Sobic001G282600 Sobic007G210500--Sobic001G282600 Sobic002G262300 Sobic002G262300 Sobic007G210500--Sobic002G262300 Sobic009G080400 Sobic009G080400 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic001G305500 Sobic001G305500 Sobic007G210500--Sobic001G305500 Sobic003G051600 Sobic003G051600 Sobic007G210500--Sobic003G051600 Sobic006G104600 Sobic006G104600 Sobic007G210500--Sobic006G104600 Sobic001G217400 Sobic001G217400 Sobic007G210500--Sobic001G217400 Sobic004G225200 Sobic004G225200 Sobic007G210500--Sobic004G225200 Sobic001G459600--Sobic001G517800 Sobic001G459600--Sobic001G000501 Sobic001G459600--Sobic004G034600 Sobic001G000700 Sobic001G000700 Sobic001G459600--Sobic001G000700 Sobic001G459600--Sobic002G418800 Sobic008G084300 Sobic008G084300 Sobic001G459600--Sobic008G084300 Sobic001G459600--Sobic008G166550 Sobic001G223550 Sobic001G223550 Sobic001G459600--Sobic001G223550 Sobic005G133600 Sobic005G133600 Sobic001G459600--Sobic005G133600 Sobic007G186200 Sobic007G186200 Sobic001G468100--Sobic007G186200 Sobic001G468100--Sobic009G207600 Sobic002G058500 Sobic002G058500 Sobic001G468100--Sobic002G058500 Sobic001G468100--Sobic001G150600 Sobic001G468100--Sobic008G153400 Sobic001G468100--Sobic001G325200 Sobic004G321800 Sobic004G321800 Sobic001G468100--Sobic004G321800 Sobic001G438600 Sobic001G438600 Sobic001G468100--Sobic001G438600 Sobic001G468100--Sobic003G087200 Sobic008G062200 Sobic008G062200 Sobic003G355600--Sobic008G062200 Sobic003G355600--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G355600--Sobic002G304000 Sobic003G355600--Sobic009G226300 Sobic010G107000 Sobic010G107000 Sobic003G355600--Sobic010G107000 Sobic003G355600--Sobic006G199000 Sobic002G009700 Sobic002G009700 Sobic003G355600--Sobic002G009700 Sobic009G193700 Sobic009G193700 Sobic003G355600--Sobic009G193700 Sobic004G101900 Sobic004G101900 Sobic003G355600--Sobic004G101900
Octagon: transcription factors


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