Gene annotation
Transcriptome id Sobic.008G130200.1
Synonym
Functional annotation -
UniProt A0A1B6PDU4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G126200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.008G070350 - K01945: phosphoribosylamine---glycine ligase
3 Sobic.009G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase, putative, expressed -
4 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
5 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -
6 Sobic.006G207000 expressed protein -
7 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
9 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
10 Sobic.009G032800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.007G214400 EF hand family protein, putative, expressed -
12 Sobic.004G128400 O-methyltransferase, putative, expressed -
13 Sobic.005G016700 DUF567 domain containing protein, putative, expressed -
14 Sobic.010G099900 expressed protein -
15 Sobic.001G495164 - -
16 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
18 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
19 Sobic.006G127900 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.001G320400 lysM domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G130200 Sobic008G130200 Sobic003G126200 Sobic003G126200 Sobic008G130200--Sobic003G126200 Sobic008G070350 Sobic008G070350 Sobic008G130200--Sobic008G070350 Sobic009G198000 Sobic009G198000 Sobic008G130200--Sobic009G198000 Sobic001G190200 Sobic001G190200 Sobic008G130200--Sobic001G190200 Sobic010G031900 Sobic010G031900 Sobic008G130200--Sobic010G031900 Sobic006G207000 Sobic006G207000 Sobic008G130200--Sobic006G207000 Sobic001G319600 Sobic001G319600 Sobic008G130200--Sobic001G319600 Sobic001G231600 Sobic001G231600 Sobic008G130200--Sobic001G231600 Sobic009G169000 Sobic009G169000 Sobic008G130200--Sobic009G169000 Sobic003G126200--Sobic008G130200 Sobic007G214400 Sobic007G214400 Sobic003G126200--Sobic007G214400 Sobic003G126200--Sobic009G198000 Sobic004G280200 Sobic004G280200 Sobic003G126200--Sobic004G280200 Sobic003G126200--Sobic009G169000 Sobic003G126200--Sobic008G070350 Sobic002G068600 Sobic002G068600 Sobic003G126200--Sobic002G068600 Sobic003G086600 Sobic003G086600 Sobic003G126200--Sobic003G086600 Sobic001G371800 Sobic001G371800 Sobic003G126200--Sobic001G371800 Sobic001G397200 Sobic001G397200 Sobic008G070350--Sobic001G397200 Sobic009G035200 Sobic009G035200 Sobic008G070350--Sobic009G035200 Sobic005G051200 Sobic005G051200 Sobic008G070350--Sobic005G051200 Sobic005G103500 Sobic005G103500 Sobic008G070350--Sobic005G103500 Sobic001G309600 Sobic001G309600 Sobic008G070350--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic008G070350--Sobic006G032700 Sobic007G026600 Sobic007G026600 Sobic008G070350--Sobic007G026600 Sobic008G070350--Sobic004G280200 Sobic008G070350--Sobic003G086600 Sobic009G198000--Sobic005G051200 Sobic005G063100 Sobic005G063100 Sobic009G198000--Sobic005G063100 Sobic008G050600 Sobic008G050600 Sobic009G198000--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic009G198000--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic009G198000--Sobic001G140900 Sobic008G136400 Sobic008G136400 Sobic009G198000--Sobic008G136400 Sobic003G116800 Sobic003G116800 Sobic009G198000--Sobic003G116800 Sobic009G198000--Sobic009G035200 Sobic002G251000 Sobic002G251000 Sobic009G198000--Sobic002G251000 Sobic010G099900 Sobic010G099900 Sobic001G190200--Sobic010G099900 Sobic006G173900 Sobic006G173900 Sobic001G190200--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic001G190200--Sobic002G393000 Sobic001G190200--Sobic005G051200 Sobic010G084700 Sobic010G084700 Sobic001G190200--Sobic010G084700 Sobic010G176600 Sobic010G176600 Sobic001G190200--Sobic010G176600 Sobic001G190200--Sobic001G319600 Sobic006G275200 Sobic006G275200 Sobic001G190200--Sobic006G275200 Sobic001G025300 Sobic001G025300 Sobic001G190200--Sobic001G025300 Sobic009G123400 Sobic009G123400 Sobic010G031900--Sobic009G123400 Sobic004G340200 Sobic004G340200 Sobic010G031900--Sobic004G340200 Sobic010G031900--Sobic007G214400 Sobic010G031900--Sobic006G032700 Sobic010G031100 Sobic010G031100 Sobic010G031900--Sobic010G031100 Sobic001G149800 Sobic001G149800 Sobic010G031900--Sobic001G149800 Sobic002G389000 Sobic002G389000 Sobic010G031900--Sobic002G389000 Sobic001G107800 Sobic001G107800 Sobic010G031900--Sobic001G107800 Sobic001G254100 Sobic001G254100 Sobic010G031900--Sobic001G254100 Sobic006G207000--Sobic003G116800 Sobic004G086400 Sobic004G086400 Sobic006G207000--Sobic004G086400 Sobic006G207100 Sobic006G207100 Sobic006G207000--Sobic006G207100 Sobic010G196600 Sobic010G196600 Sobic006G207000--Sobic010G196600 Sobic002G339000 Sobic002G339000 Sobic006G207000--Sobic002G339000 Sobic003G148300 Sobic003G148300 Sobic006G207000--Sobic003G148300 Sobic001G425500 Sobic001G425500 Sobic006G207000--Sobic001G425500 Sobic007G155200 Sobic007G155200 Sobic006G207000--Sobic007G155200 Sobic004G004500 Sobic004G004500 Sobic006G207000--Sobic004G004500 Sobic004G216600 Sobic004G216600 Sobic001G319600--Sobic004G216600 Sobic002G361100 Sobic002G361100 Sobic001G319600--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic001G319600--Sobic007G067600 Sobic001G319600--Sobic010G084700 Sobic001G319600--Sobic006G275200 Sobic009G061200 Sobic009G061200 Sobic001G319600--Sobic009G061200 Sobic002G261000 Sobic002G261000 Sobic001G319600--Sobic002G261000 Sobic001G319600--Sobic006G173900 Sobic001G319600--Sobic001G231600 Sobic007G135201 Sobic007G135201 Sobic001G231600--Sobic007G135201 Sobic001G231600--Sobic007G067600 Sobic001G495164 Sobic001G495164 Sobic001G231600--Sobic001G495164 Sobic006G084600 Sobic006G084600 Sobic001G231600--Sobic006G084600 Sobic007G067350 Sobic007G067350 Sobic001G231600--Sobic007G067350 Sobic010G102300 Sobic010G102300 Sobic001G231600--Sobic010G102300 Sobic002G195400 Sobic002G195400 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic004G221500 Sobic004G221500 Sobic001G231600--Sobic004G221500 Sobic001G320900 Sobic001G320900 Sobic009G169000--Sobic001G320900 Sobic003G144700 Sobic003G144700 Sobic009G169000--Sobic003G144700 Sobic009G169000--Sobic004G280200 Sobic003G197200 Sobic003G197200 Sobic009G169000--Sobic003G197200 Sobic003G355100 Sobic003G355100 Sobic009G169000--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic009G169000--Sobic007G214600 Sobic003G148600 Sobic003G148600 Sobic009G169000--Sobic003G148600 Sobic009G169000--Sobic001G107800 Sobic009G169000--Sobic007G026600
Octagon: transcription factors


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